RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 NBPF15Q8N660 670 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 DBF4Q9UBU7 674 aaPredicted RBP10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 FAM205CA6NFA0 338 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 FKBP5Q13451 457 aaPredicted RBP10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 B4GALNT3Q6L9W6 998 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 ITPRIPQ8IWB1 547 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 HS3ST6Q96QI5 342 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 CHMP4AQ9BY43 222 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 ERBB4Q15303 1308 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 AFDNP55196 1824 aaKnown RBP10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 A1BGP04217 495 aa10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 MYL6BP14649 208 aa10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 INTS3Q68E01 1043 aaKnown RBP10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 MS4A4AQ96JQ5 239 aa10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 MFRPQ9BY79 579 aa10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 HYPKQ9NX55 129 aa10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 TNS1Q9HBL0 1735 aaKnown RBP10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 LOC102724428A0A0B4J2F2 783 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 CYP19A1P11511 503 aaPredicted RBP10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 SIK1P57059 783 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 ITPK1Q13572 414 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 XAGE3Q8WTP9 111 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 SMARCC1Q92922 1105 aaPredicted RBP10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 DDX19BQ9UMR2 479 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 SRCAPQ6ZRS2 3230 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 POTEB3A0JP26 581 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 PI4KAP2A4QPH2 592 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 ZBTB7BO15156 539 aaPredicted RBP10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 AIMP1Q12904 312 aaKnown RBP10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 POTEBQ6S5H4 581 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 FAM196AQ6ZSG2 479 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 PI4KAP1Q8N8J0 262 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 FBXO22Q8NEZ5 403 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 TEX13AQ9BXU3 409 aaPredicted RBP10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 ATP10DQ9P241 1426 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 ANKRD36CQ5JPF3 1778 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 NUP98P52948 1817 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 SLC4A10Q6U841 1118 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 KSR2Q6VAB6 950 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 COPS6Q7L5N1 327 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 DNAAF4Q8WXU2 420 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 ZBTB40Q9NUA8 1239 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 ZBTB1Q9Y2K1 713 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 PCDHB15Q9Y5E8 787 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 BCORQ6W2J9 1755 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 CCT4P50991 539 aaKnown RBP10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 KCNQ4P56696 695 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 EN1Q05925 392 aaPredicted RBP10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 BEND3Q5T5X7 828 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 INTS5Q6P9B9 1019 aaKnown RBP10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 TTLL7Q6ZT98 887 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 CCDC136Q96JN2 1154 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 MEIS3Q99687 375 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 KRTAP3-2Q9BYR7 98 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 MAP3K2Q9Y2U5 619 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 C4BP0C0L5 1744 aa10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 STARD3NLO95772 234 aa10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 CRKLP46109 303 aaKnown RBP10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 AAMPQ13685 434 aa10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 LINC00116Q8NCU8 138 aa10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 KDM2BQ8NHM5 1336 aa10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 UBR3Q6ZT12 1888 aa10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 PSDA5PKW4 1024 aaPredicted RBP10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 TRIM37O94972 964 aa10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 DDX58O95786 925 aaKnown RBP10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 HOXB3P14651 431 aaPredicted RBP10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 PLBD2Q8NHP8 589 aa10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 C1orf115Q9H7X2 142 aa10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 CCDC87Q9NVE4 849 aa10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 SCN7AQ01118 1682 aa10.21□□□□□ -0.78
DEPDC4-207ENST00000549249 C4AP0C0L4 1744 aa10.21□□□□□ -0.78
DEPDC4-207ENST00000549249 RGPD3A6NKT7 1758 aaPredicted RBP10.21□□□□□ -0.78
DEPDC4-207ENST00000549249 RGPD4Q7Z3J3 1758 aa10.21□□□□□ -0.78
DEPDC4-207ENST00000549249 APBA3O96018 575 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 IGHDP01880 384 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 IGKV5-2P06315 115 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 ANKRD13DQ6ZTN6 518 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 RIC3Q7Z5B4 369 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 ZNF710Q8N1W2 664 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 TUBGCP6Q96RT7 1819 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 METTL22Q9BUU2 404 aaPredicted RBP10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 CNTNAP4Q9C0A0 1308 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 SRCIN1Q9C0H9 1055 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 USP44Q9H0E7 712 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 EP400Q96L91 3159 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 IBTKQ9P2D0 1353 aaPredicted RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 ALDH1L1O75891 902 aa10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 IL6STP40189 918 aaPredicted RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 EIF5P55010 431 aaKnown RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 R3HDM1Q15032 1099 aaKnown RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 CWF19L2Q2TBE0 894 aaKnown RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 MICALL2Q8IY33 904 aa10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 LINS1Q8NG48 757 aa10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 MYD88Q99836 296 aa10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 ZBTB3Q9H5J0 574 aa10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 LRRC4BQ9NT99 713 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms