RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 UTP14AQ9BVJ6 771 aaKnown RBP13.23□□□□□ -0.29
PFDN5-206ENST00000548984 TAOK3Q9H2K8 898 aa13.23□□□□□ -0.29
PFDN5-206ENST00000548984 DICER1Q9UPY3 1922 aaKnown RBP13.23□□□□□ -0.29
PFDN5-206ENST00000548984 KIF3CO14782 793 aa13.22□□□□□ -0.29
PFDN5-206ENST00000548984 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
PFDN5-206ENST00000548984 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
PFDN5-206ENST00000548984 RPGRQ92834 1020 aaKnown RBP13.22□□□□□ -0.29
PFDN5-206ENST00000548984 HOXA10P31260 410 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-206ENST00000548984 GOLGA2Q08379 1002 aa13.21□□□□□ -0.29
PFDN5-206ENST00000548984 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.29
PFDN5-206ENST00000548984 CC2D2BQ6DHV5 1058 aa13.21□□□□□ -0.29
PFDN5-206ENST00000548984 ANKRD13DQ6ZTN6 518 aa13.21□□□□□ -0.29
PFDN5-206ENST00000548984 NLRP10Q86W26 655 aa13.21□□□□□ -0.29
PFDN5-206ENST00000548984 RTKN2Q8IZC4 609 aa13.21□□□□□ -0.29
PFDN5-206ENST00000548984 C7orf43Q8WVR3 580 aa13.21□□□□□ -0.29
PFDN5-206ENST00000548984 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-206ENST00000548984 SH3TC1Q8TE82 1336 aa13.2□□□□□ -0.3
PFDN5-206ENST00000548984 GRIPAP1Q4V328 841 aa13.2□□□□□ -0.3
PFDN5-206ENST00000548984 SLC10A5Q5PT55 438 aa13.2□□□□□ -0.3
PFDN5-206ENST00000548984 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
PFDN5-206ENST00000548984 NLRP3Q96P20 1036 aa13.2□□□□□ -0.3
PFDN5-206ENST00000548984 CCDC88AQ3V6T2 1871 aa13.2□□□□□ -0.3
PFDN5-206ENST00000548984 PRELPP51888 382 aa13.19□□□□□ -0.3
PFDN5-206ENST00000548984 FKBP4Q02790 459 aaKnown RBP eCLIP13.19□□□□□ -0.3
PFDN5-206ENST00000548984 WDR63Q8IWG1 891 aa13.19□□□□□ -0.3
PFDN5-206ENST00000548984 CRAMP1Q96RY5 1269 aa13.19□□□□□ -0.3
PFDN5-206ENST00000548984 LAMB2P55268 1798 aa13.18□□□□□ -0.3
PFDN5-206ENST00000548984 GLTPD2A6NH11 291 aa13.18□□□□□ -0.3
PFDN5-206ENST00000548984 TOMM70O94826 608 aa13.18□□□□□ -0.3
PFDN5-206ENST00000548984 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
PFDN5-206ENST00000548984 TRIM28Q13263 835 aaKnown RBP13.18□□□□□ -0.3
PFDN5-206ENST00000548984 C16orf71Q8IYS4 520 aaPredicted RBP13.18□□□□□ -0.3
PFDN5-206ENST00000548984 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
PFDN5-206ENST00000548984 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
PFDN5-206ENST00000548984 ISCA1Q9BUE6 129 aa13.18□□□□□ -0.3
PFDN5-206ENST00000548984 STK31Q9BXU1 1019 aa13.18□□□□□ -0.3
PFDN5-206ENST00000548984 NMRK2Q9NPI5 230 aa13.18□□□□□ -0.3
PFDN5-206ENST00000548984 TRMT112Q9UI30 125 aaKnown RBP13.18□□□□□ -0.3
PFDN5-206ENST00000548984 SNED1Q8TER0 1413 aa13.18□□□□□ -0.3
PFDN5-206ENST00000548984 WDR90Q96KV7 1748 aa13.17□□□□□ -0.3
PFDN5-206ENST00000548984 SENP3-EIF4A1A0A087X0R7 540 aa13.17□□□□□ -0.3
PFDN5-206ENST00000548984 ELL2O00472 640 aaPredicted RBP13.17□□□□□ -0.3
PFDN5-206ENST00000548984 HSP90B1P14625 803 aaKnown RBP13.17□□□□□ -0.3
PFDN5-206ENST00000548984 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
PFDN5-206ENST00000548984 PSMD1Q99460 953 aa13.17□□□□□ -0.3
PFDN5-206ENST00000548984 FANCIQ9NVI1 1328 aa13.16□□□□□ -0.3
PFDN5-206ENST00000548984 PPEF1O14829 653 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-206ENST00000548984 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-206ENST00000548984 RIC3Q7Z5B4 369 aa13.16□□□□□ -0.3
PFDN5-206ENST00000548984 FAM9BQ8IZU0 186 aa13.16□□□□□ -0.3
PFDN5-206ENST00000548984 RBM46Q8TBY0 533 aaKnown RBP13.16□□□□□ -0.3
PFDN5-206ENST00000548984 TMX4Q9H1E5 349 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-206ENST00000548984 DDX60Q8IY21 1712 aaKnown RBP13.16□□□□□ -0.3
PFDN5-206ENST00000548984 TSPYL6Q8N831 410 aa13.15□□□□□ -0.3
PFDN5-206ENST00000548984 PHAXQ9H814 394 aaKnown RBP13.15□□□□□ -0.3
PFDN5-206ENST00000548984 ABCC4O15439 1325 aa13.14□□□□□ -0.31
PFDN5-206ENST00000548984 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
PFDN5-206ENST00000548984 VEGFAP15692 232 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-206ENST00000548984 HSPA6P17066 643 aa13.14□□□□□ -0.31
PFDN5-206ENST00000548984 C3orf67Q6ZVT6 689 aa13.14□□□□□ -0.31
PFDN5-206ENST00000548984 DDX46Q7L014 1031 aaKnown RBP13.14□□□□□ -0.31
PFDN5-206ENST00000548984 TMC4Q7Z404 712 aa13.14□□□□□ -0.31
PFDN5-206ENST00000548984 MYH16Q9H6N6 1097 aa13.14□□□□□ -0.31
PFDN5-206ENST00000548984 ATP5J2-PTCD1G3V325 749 aa13.13□□□□□ -0.31
PFDN5-206ENST00000548984 BBOX1O75936 387 aa13.13□□□□□ -0.31
PFDN5-206ENST00000548984 HCLS1P14317 486 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-206ENST00000548984 IARSP41252 1262 aaKnown RBP13.13□□□□□ -0.31
PFDN5-206ENST00000548984 FSTL1Q12841 308 aa13.13□□□□□ -0.31
PFDN5-206ENST00000548984 GRAPQ13588 217 aa13.13□□□□□ -0.31
PFDN5-206ENST00000548984 CCDC191Q8NCU4 936 aa13.13□□□□□ -0.31
PFDN5-206ENST00000548984 GRAPLQ8TC17 118 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-206ENST00000548984 RRAGCQ9HB90 399 aa13.13□□□□□ -0.31
PFDN5-206ENST00000548984 ZNF277Q9NRM2 450 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-206ENST00000548984 ATP6V0A2Q9Y487 856 aa13.13□□□□□ -0.31
PFDN5-206ENST00000548984 LRRC37AA6NMS7 1700 aa13.13□□□□□ -0.31
PFDN5-206ENST00000548984 CCER2I3L3R5 266 aa13.12□□□□□ -0.31
PFDN5-206ENST00000548984 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
PFDN5-206ENST00000548984 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
PFDN5-206ENST00000548984 KSR2Q6VAB6 950 aa13.12□□□□□ -0.31
PFDN5-206ENST00000548984 SYNE4Q8N205 404 aa13.12□□□□□ -0.31
PFDN5-206ENST00000548984 ZBTB38Q8NAP3 1195 aaPredicted RBP13.12□□□□□ -0.31
PFDN5-206ENST00000548984 SUPT20HQ8NEM7 779 aa13.12□□□□□ -0.31
PFDN5-206ENST00000548984 FAM89AQ96GI7 184 aa13.12□□□□□ -0.31
PFDN5-206ENST00000548984 MYD88Q99836 296 aa13.12□□□□□ -0.31
PFDN5-206ENST00000548984 METTL22Q9BUU2 404 aaPredicted RBP13.12□□□□□ -0.31
PFDN5-206ENST00000548984 VPS33BQ9H267 617 aa13.12□□□□□ -0.31
PFDN5-206ENST00000548984 IQCA1LA6NCM1 817 aa13.11□□□□□ -0.31
PFDN5-206ENST00000548984 PCCAP05165 728 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-206ENST00000548984 SF3B3Q15393 1217 aaKnown RBP13.11□□□□□ -0.31
PFDN5-206ENST00000548984 SMC1BQ8NDV3 1235 aa13.11□□□□□ -0.31
PFDN5-206ENST00000548984 JDP2Q8WYK2 163 aa13.11□□□□□ -0.31
PFDN5-206ENST00000548984 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-206ENST00000548984 CWC25Q9NXE8 425 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-206ENST00000548984 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-206ENST00000548984 SCN4AP35499 1836 aa13.11□□□□□ -0.31
PFDN5-206ENST00000548984 IRS4O14654 1257 aaPredicted RBP13.1□□□□□ -0.31
PFDN5-206ENST00000548984 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
PFDN5-206ENST00000548984 MAP3K2Q9Y2U5 619 aa13.1□□□□□ -0.31
PFDN5-206ENST00000548984 ZNF521Q96K83 1311 aa13.1□□□□□ -0.31
PFDN5-206ENST00000548984 CDHR2Q9BYE9 1310 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms