RNA–Protein interactions for RNA: ENST00000547923.1

TROAP-206, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TROAP, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-206ENST00000547923 NLRP10Q86W26 655 aa12.84□□□□□ -0.35
TROAP-206ENST00000547923 TRMT2AQ8IZ69 625 aaKnown RBP12.84□□□□□ -0.35
TROAP-206ENST00000547923 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
TROAP-206ENST00000547923 RTL5Q5HYW3 569 aaPredicted RBP12.83□□□□□ -0.35
TROAP-206ENST00000547923 KSR2Q6VAB6 950 aa12.83□□□□□ -0.35
TROAP-206ENST00000547923 BCL2L13Q9BXK5 485 aa12.83□□□□□ -0.35
TROAP-206ENST00000547923 NTSR2O95665 410 aa12.83□□□□□ -0.36
TROAP-206ENST00000547923 KCNA3P22001 575 aa12.83□□□□□ -0.36
TROAP-206ENST00000547923 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.36
TROAP-206ENST00000547923 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.36
TROAP-206ENST00000547923 ABCC12Q96J65 1359 aa12.83□□□□□ -0.36
TROAP-206ENST00000547923 TTLL6Q8N841 843 aa12.82□□□□□ -0.36
TROAP-206ENST00000547923 RPGRQ92834 1020 aaKnown RBP12.82□□□□□ -0.36
TROAP-206ENST00000547923 METTL22Q9BUU2 404 aaPredicted RBP12.82□□□□□ -0.36
TROAP-206ENST00000547923 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
TROAP-206ENST00000547923 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
TROAP-206ENST00000547923 IBTKQ9P2D0 1353 aaPredicted RBP12.82□□□□□ -0.36
TROAP-206ENST00000547923 KIAA1551Q9HCM1 1747 aa12.82□□□□□ -0.36
TROAP-206ENST00000547923 ZBED9Q6R2W3 1325 aa12.81□□□□□ -0.36
TROAP-206ENST00000547923 FAM89AQ96GI7 184 aa12.81□□□□□ -0.36
TROAP-206ENST00000547923 MASTLQ96GX5 879 aa12.81□□□□□ -0.36
TROAP-206ENST00000547923 NLRP3Q96P20 1036 aa12.81□□□□□ -0.36
TROAP-206ENST00000547923 ISCA1Q9BUE6 129 aa12.81□□□□□ -0.36
TROAP-206ENST00000547923 ADCY9O60503 1353 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 RNF123Q5XPI4 1314 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 SRGNP10124 158 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
TROAP-206ENST00000547923 ARHGAP27Q6ZUM4 889 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 DNAAF4Q8WXU2 420 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 CWC25Q9NXE8 425 aaPredicted RBP12.8□□□□□ -0.36
TROAP-206ENST00000547923 ARFGEF2Q9Y6D5 1785 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 F6X3S4 739 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 NPR1P16066 1061 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 SLC4A10Q6U841 1118 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 SYNE4Q8N205 404 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 SSH1Q8WYL5 1049 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 CNKSR1Q969H4 720 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
TROAP-206ENST00000547923 CACNA1FO60840 1977 aa12.79□□□□□ -0.36
TROAP-206ENST00000547923 ANKRD36CQ5JPF3 1778 aa12.79□□□□□ -0.36
TROAP-206ENST00000547923 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
TROAP-206ENST00000547923 CWF19L2Q2TBE0 894 aaKnown RBP12.79□□□□□ -0.36
TROAP-206ENST00000547923 STYK1Q6J9G0 422 aa12.79□□□□□ -0.36
TROAP-206ENST00000547923 CCDC191Q8NCU4 936 aa12.79□□□□□ -0.36
TROAP-206ENST00000547923 CT47B1P0C2W7 299 aaPredicted RBP12.78□□□□□ -0.36
TROAP-206ENST00000547923 TRIM28Q13263 835 aaKnown RBP12.78□□□□□ -0.36
TROAP-206ENST00000547923 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
TROAP-206ENST00000547923 PRPF40BQ6NWY9 871 aaKnown RBP12.78□□□□□ -0.36
TROAP-206ENST00000547923 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
TROAP-206ENST00000547923 YTHDC1Q96MU7 727 aaKnown RBP12.78□□□□□ -0.36
TROAP-206ENST00000547923 IRS4O14654 1257 aaPredicted RBP12.77□□□□□ -0.36
TROAP-206ENST00000547923 C21orf2O43822 256 aa12.77□□□□□ -0.36
TROAP-206ENST00000547923 IGKV5-2P06315 115 aa12.77□□□□□ -0.36
TROAP-206ENST00000547923 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.36
TROAP-206ENST00000547923 MRPL50Q8N5N7 158 aaKnown RBP12.77□□□□□ -0.36
TROAP-206ENST00000547923 ZBTB38Q8NAP3 1195 aaPredicted RBP12.77□□□□□ -0.36
TROAP-206ENST00000547923 BRCA1P38398 1863 aaKnown RBP12.77□□□□□ -0.37
TROAP-206ENST00000547923 KLRG2A4D1S0 409 aaPredicted RBP12.77□□□□□ -0.37
TROAP-206ENST00000547923 NEURL1BA8MQ27 555 aa12.77□□□□□ -0.37
TROAP-206ENST00000547923 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.37
TROAP-206ENST00000547923 ALDH1B1P30837 517 aa12.77□□□□□ -0.37
TROAP-206ENST00000547923 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.37
TROAP-206ENST00000547923 LINS1Q8NG48 757 aa12.77□□□□□ -0.37
TROAP-206ENST00000547923 RBM17Q96I25 401 aaKnown RBP12.77□□□□□ -0.37
TROAP-206ENST00000547923 PCCAP05165 728 aaPredicted RBP12.76□□□□□ -0.37
TROAP-206ENST00000547923 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
TROAP-206ENST00000547923 SLC10A5Q5PT55 438 aa12.76□□□□□ -0.37
TROAP-206ENST00000547923 PTPRCP08575 1304 aa12.75□□□□□ -0.37
TROAP-206ENST00000547923 DDX46Q7L014 1031 aaKnown RBP12.75□□□□□ -0.37
TROAP-206ENST00000547923 UBE3BQ7Z3V4 1068 aa12.75□□□□□ -0.37
TROAP-206ENST00000547923 TMX4Q9H1E5 349 aaPredicted RBP12.75□□□□□ -0.37
TROAP-206ENST00000547923 RIC1Q4ADV7 1423 aa12.75□□□□□ -0.37
TROAP-206ENST00000547923 COL11A2P13942 1736 aaPredicted RBP12.75□□□□□ -0.37
TROAP-206ENST00000547923 RARSP54136 660 aaKnown RBP12.74□□□□□ -0.37
TROAP-206ENST00000547923 GCKRQ14397 625 aa12.74□□□□□ -0.37
TROAP-206ENST00000547923 FRAT1Q92837 279 aaPredicted RBP12.74□□□□□ -0.37
TROAP-206ENST00000547923 CCDC85AQ96PX6 553 aaPredicted RBP12.74□□□□□ -0.37
TROAP-206ENST00000547923 SRCIN1Q9C0H9 1055 aa12.74□□□□□ -0.37
TROAP-206ENST00000547923 TNRC6CQ9HCJ0 1690 aaKnown RBP12.74□□□□□ -0.37
TROAP-206ENST00000547923 DLEC1Q9Y238 1755 aa12.74□□□□□ -0.37
TROAP-206ENST00000547923 BEND3Q5T5X7 828 aa12.73□□□□□ -0.37
TROAP-206ENST00000547923 SOGA3Q5TF21 947 aa12.73□□□□□ -0.37
TROAP-206ENST00000547923 C9orf78Q9NZ63 289 aaPredicted RBP12.73□□□□□ -0.37
TROAP-206ENST00000547923 NOB1Q9ULX3 412 aaKnown RBP12.73□□□□□ -0.37
TROAP-206ENST00000547923 KIF16BQ96L93 1317 aa12.73□□□□□ -0.37
TROAP-206ENST00000547923 PPEF1O14829 653 aaPredicted RBP12.73□□□□□ -0.37
TROAP-206ENST00000547923 RASSF7Q02833 373 aa12.73□□□□□ -0.37
TROAP-206ENST00000547923 CCDC93Q567U6 631 aa12.73□□□□□ -0.37
TROAP-206ENST00000547923 ABCC4O15439 1325 aa12.72□□□□□ -0.37
TROAP-206ENST00000547923 PDE8AO60658 829 aa12.72□□□□□ -0.37
TROAP-206ENST00000547923 HOXA10P31260 410 aaPredicted RBP12.72□□□□□ -0.37
TROAP-206ENST00000547923 CCDC152Q4G0S7 254 aa12.72□□□□□ -0.37
TROAP-206ENST00000547923 OLFM4Q6UX06 510 aa12.72□□□□□ -0.37
TROAP-206ENST00000547923 CRAMP1Q96RY5 1269 aa12.72□□□□□ -0.37
TROAP-206ENST00000547923 API5Q9BZZ5 524 aaKnown RBP12.71□□□□□ -0.37
TROAP-206ENST00000547923 TAOK3Q9H2K8 898 aa12.71□□□□□ -0.37
TROAP-206ENST00000547923 RNF181Q9P0P0 153 aa12.71□□□□□ -0.37
TROAP-206ENST00000547923 CDHR2Q9BYE9 1310 aa12.71□□□□□ -0.38
TROAP-206ENST00000547923 CACNA1SQ13698 1873 aa12.71□□□□□ -0.38
TROAP-206ENST00000547923 SLX4Q8IY92 1834 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms