RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 ARHGAP27Q6ZUM4 889 aa21.85■■□□□ 1.09
RBFOX1-207ENST00000547338 TSPYL6Q8N831 410 aa21.85■■□□□ 1.09
RBFOX1-207ENST00000547338 SLX4Q8IY92 1834 aa21.84■■□□□ 1.09
RBFOX1-207ENST00000547338 IBTKQ9P2D0 1353 aaPredicted RBP21.84■■□□□ 1.09
RBFOX1-207ENST00000547338 ELL2O00472 640 aaPredicted RBP21.84■■□□□ 1.09
RBFOX1-207ENST00000547338 SRGNP10124 158 aa21.84■■□□□ 1.09
RBFOX1-207ENST00000547338 TTLL6Q8N841 843 aa21.84■■□□□ 1.09
RBFOX1-207ENST00000547338 ARFGEF2Q9Y6D5 1785 aa21.84■■□□□ 1.09
RBFOX1-207ENST00000547338 AIMP1Q12904 312 aaKnown RBP21.83■■□□□ 1.09
RBFOX1-207ENST00000547338 SUSD4Q5VX71 490 aa21.83■■□□□ 1.09
RBFOX1-207ENST00000547338 TPTE2Q6XPS3 522 aa21.83■■□□□ 1.09
RBFOX1-207ENST00000547338 SBF1O95248 1867 aa21.83■■□□□ 1.08
RBFOX1-207ENST00000547338 NTSR2O95665 410 aa21.82■■□□□ 1.08
RBFOX1-207ENST00000547338 PRELPP51888 382 aa21.82■■□□□ 1.08
RBFOX1-207ENST00000547338 NUTM1Q86Y26 1132 aa21.82■■□□□ 1.08
RBFOX1-207ENST00000547338 DBF4Q9UBU7 674 aaPredicted RBP21.82■■□□□ 1.08
RBFOX1-207ENST00000547338 CACNA1SQ13698 1873 aa21.82■■□□□ 1.08
RBFOX1-207ENST00000547338 ERFEQ4G0M1 354 aa21.81■■□□□ 1.08
RBFOX1-207ENST00000547338 PDZRN3Q9UPQ7 1066 aa21.81■■□□□ 1.08
RBFOX1-207ENST00000547338 RIC1Q4ADV7 1423 aa21.81■■□□□ 1.08
RBFOX1-207ENST00000547338 ZNF622Q969S3 477 aaKnown RBP eCLIP21.8■■□□□ 1.08
RBFOX1-207ENST00000547338 NPHP1O15259 732 aa21.8■■□□□ 1.08
RBFOX1-207ENST00000547338 STYK1Q6J9G0 422 aa21.8■■□□□ 1.08
RBFOX1-207ENST00000547338 ANP32AP39687 249 aaKnown RBP21.79■■□□□ 1.08
RBFOX1-207ENST00000547338 RASSF7Q02833 373 aa21.79■■□□□ 1.08
RBFOX1-207ENST00000547338 CLUAP1Q96AJ1 413 aa21.79■■□□□ 1.08
RBFOX1-207ENST00000547338 BACH2Q9BYV9 841 aa21.79■■□□□ 1.08
RBFOX1-207ENST00000547338 FER1L6Q2WGJ9 1857 aa21.78■■□□□ 1.08
RBFOX1-207ENST00000547338 NFKBIEO00221 500 aa21.78■■□□□ 1.08
RBFOX1-207ENST00000547338 PDE4AP27815 886 aa21.78■■□□□ 1.08
RBFOX1-207ENST00000547338 ALDH1L2Q3SY69 923 aa21.78■■□□□ 1.08
RBFOX1-207ENST00000547338 CRY2Q49AN0 593 aa21.78■■□□□ 1.08
RBFOX1-207ENST00000547338 C3orf67Q6ZVT6 689 aa21.78■■□□□ 1.08
RBFOX1-207ENST00000547338 MASTLQ96GX5 879 aa21.78■■□□□ 1.08
RBFOX1-207ENST00000547338 ANP32EQ9BTT0 268 aa21.78■■□□□ 1.08
RBFOX1-207ENST00000547338 NYXQ9GZU5 481 aa21.78■■□□□ 1.08
RBFOX1-207ENST00000547338 HYPKQ9NX55 129 aa21.78■■□□□ 1.08
RBFOX1-207ENST00000547338 BRPF1P55201 1214 aaPredicted RBP21.77■■□□□ 1.08
RBFOX1-207ENST00000547338 TCIRG1Q13488 830 aa21.77■■□□□ 1.08
RBFOX1-207ENST00000547338 ZKSCAN2Q63HK3 967 aa21.77■■□□□ 1.08
RBFOX1-207ENST00000547338 PRPF40BQ6NWY9 871 aaKnown RBP21.77■■□□□ 1.08
RBFOX1-207ENST00000547338 PHAXQ9H814 394 aaKnown RBP21.77■■□□□ 1.08
RBFOX1-207ENST00000547338 C9orf131Q5VYM1 1079 aa21.76■■□□□ 1.07
RBFOX1-207ENST00000547338 NLRP10Q86W26 655 aa21.76■■□□□ 1.07
RBFOX1-207ENST00000547338 PLBD2Q8NHP8 589 aa21.76■■□□□ 1.07
RBFOX1-207ENST00000547338 C7orf43Q8WVR3 580 aa21.76■■□□□ 1.07
RBFOX1-207ENST00000547338 IPO8O15397 1037 aaKnown RBP21.75■■□□□ 1.07
RBFOX1-207ENST00000547338 C21orf2O43822 256 aa21.75■■□□□ 1.07
RBFOX1-207ENST00000547338 NPR1P16066 1061 aa21.75■■□□□ 1.07
RBFOX1-207ENST00000547338 PARP10Q53GL7 1025 aa21.75■■□□□ 1.07
RBFOX1-207ENST00000547338 ANKRD13DQ6ZTN6 518 aa21.75■■□□□ 1.07
RBFOX1-207ENST00000547338 SYNE4Q8N205 404 aa21.75■■□□□ 1.07
RBFOX1-207ENST00000547338 CNKSR1Q969H4 720 aa21.75■■□□□ 1.07
RBFOX1-207ENST00000547338 ZNF219Q9P2Y4 722 aaPredicted RBP21.75■■□□□ 1.07
RBFOX1-207ENST00000547338 LAMB2P55268 1798 aa21.74■■□□□ 1.07
RBFOX1-207ENST00000547338 ISCA1Q9BUE6 129 aa21.74■■□□□ 1.07
RBFOX1-207ENST00000547338 GTF2E1P29083 439 aaPredicted RBP21.73■■□□□ 1.07
RBFOX1-207ENST00000547338 EXOSC9Q06265 439 aaKnown RBP21.73■■□□□ 1.07
RBFOX1-207ENST00000547338 FRAT1Q92837 279 aaPredicted RBP21.73■■□□□ 1.07
RBFOX1-207ENST00000547338 UTP14AQ9BVJ6 771 aaKnown RBP21.73■■□□□ 1.07
RBFOX1-207ENST00000547338 SNED1Q8TER0 1413 aa21.72■■□□□ 1.07
RBFOX1-207ENST00000547338 CCDC88AQ3V6T2 1871 aa21.72■■□□□ 1.07
RBFOX1-207ENST00000547338 KIF16BQ96L93 1317 aa21.72■■□□□ 1.07
RBFOX1-207ENST00000547338 TWISTNBQ3B726 338 aaPredicted RBP21.72■■□□□ 1.07
RBFOX1-207ENST00000547338 HSP90AB3PQ58FF7 597 aa21.72■■□□□ 1.07
RBFOX1-207ENST00000547338 SLC10A5Q5PT55 438 aa21.72■■□□□ 1.07
RBFOX1-207ENST00000547338 OLFM4Q6UX06 510 aa21.72■■□□□ 1.07
RBFOX1-207ENST00000547338 PPP1R42Q7Z4L9 355 aa21.72■■□□□ 1.07
RBFOX1-207ENST00000547338 SLC51AQ86UW1 340 aa21.72■■□□□ 1.07
RBFOX1-207ENST00000547338 CHMP4BQ9H444 224 aaKnown RBP21.72■■□□□ 1.07
RBFOX1-207ENST00000547338 CCDC30Q5VVM6 783 aa21.71■■□□□ 1.07
RBFOX1-207ENST00000547338 ZNF526Q8TF50 670 aaPredicted RBP21.71■■□□□ 1.07
RBFOX1-207ENST00000547338 RNF181Q9P0P0 153 aa21.71■■□□□ 1.07
RBFOX1-207ENST00000547338 DDX60Q8IY21 1712 aaKnown RBP21.71■■□□□ 1.07
RBFOX1-207ENST00000547338 HOXA10P31260 410 aaPredicted RBP21.7■■□□□ 1.07
RBFOX1-207ENST00000547338 DZIP1LQ8IYY4 767 aaKnown RBP21.7■■□□□ 1.07
RBFOX1-207ENST00000547338 COG6Q9Y2V7 657 aa21.7■■□□□ 1.07
RBFOX1-207ENST00000547338 ATP5J2-PTCD1G3V325 749 aa21.7■■□□□ 1.06
RBFOX1-207ENST00000547338 MVPQ14764 893 aaKnown RBP21.7■■□□□ 1.06
RBFOX1-207ENST00000547338 PANK1Q8TE04 598 aa21.7■■□□□ 1.06
RBFOX1-207ENST00000547338 TIAM2Q8IVF5 1701 aa21.69■■□□□ 1.06
RBFOX1-207ENST00000547338 ERICH6Q7L0X2 663 aa21.69■■□□□ 1.06
RBFOX1-207ENST00000547338 G2E3Q7L622 706 aa21.69■■□□□ 1.06
RBFOX1-207ENST00000547338 IPO9Q96P70 1041 aaKnown RBP21.69■■□□□ 1.06
RBFOX1-207ENST00000547338 RWDD1Q9H446 243 aaPredicted RBP21.69■■□□□ 1.06
RBFOX1-207ENST00000547338 LTBP3Q9NS15 1303 aa21.68■■□□□ 1.06
RBFOX1-207ENST00000547338 VAMP4O75379 141 aa21.68■■□□□ 1.06
RBFOX1-207ENST00000547338 HCLS1P14317 486 aaPredicted RBP21.68■■□□□ 1.06
RBFOX1-207ENST00000547338 LMNB1P20700 586 aa21.68■■□□□ 1.06
RBFOX1-207ENST00000547338 ARHGAP45Q92619 1136 aa21.68■■□□□ 1.06
RBFOX1-207ENST00000547338 SMC4Q9NTJ3 1288 aa21.68■■□□□ 1.06
RBFOX1-207ENST00000547338 TRIM28Q13263 835 aaKnown RBP21.67■■□□□ 1.06
RBFOX1-207ENST00000547338 FTSJ3Q8IY81 847 aaKnown RBP21.67■■□□□ 1.06
RBFOX1-207ENST00000547338 GPBP1L1Q9HC44 474 aaPredicted RBP21.67■■□□□ 1.06
RBFOX1-207ENST00000547338 TRMT112Q9UI30 125 aaKnown RBP21.67■■□□□ 1.06
RBFOX1-207ENST00000547338 DDX19BQ9UMR2 479 aa21.67■■□□□ 1.06
RBFOX1-207ENST00000547338 DICER1Q9UPY3 1922 aaKnown RBP21.67■■□□□ 1.06
RBFOX1-207ENST00000547338 ATF7IPQ6VMQ6 1270 aa21.66■■□□□ 1.06
RBFOX1-207ENST00000547338 SH3TC1Q8TE82 1336 aa21.66■■□□□ 1.06
RBFOX1-207ENST00000547338 COL4A1P02462 1669 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms