RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 PPP1R42Q7Z4L9 355 aa14.09□□□□□ -0.15
GCN1-202ENST00000547263 HOXA10P31260 410 aaPredicted RBP14.08□□□□□ -0.16
GCN1-202ENST00000547263 ERFEQ4G0M1 354 aa14.08□□□□□ -0.16
GCN1-202ENST00000547263 G2E3Q7L622 706 aa14.08□□□□□ -0.16
GCN1-202ENST00000547263 CCDC24Q8N4L8 307 aa14.08□□□□□ -0.16
GCN1-202ENST00000547263 TTLL6Q8N841 843 aa14.08□□□□□ -0.16
GCN1-202ENST00000547263 C7orf43Q8WVR3 580 aa14.08□□□□□ -0.16
GCN1-202ENST00000547263 BCS1LQ9Y276 419 aa14.08□□□□□ -0.16
GCN1-202ENST00000547263 NUTM1Q86Y26 1132 aa14.07□□□□□ -0.16
GCN1-202ENST00000547263 MASTLQ96GX5 879 aa14.07□□□□□ -0.16
GCN1-202ENST00000547263 METTL22Q9BUU2 404 aaPredicted RBP14.07□□□□□ -0.16
GCN1-202ENST00000547263 SLC4A2P04920 1241 aa14.06□□□□□ -0.16
GCN1-202ENST00000547263 NPR1P16066 1061 aa14.06□□□□□ -0.16
GCN1-202ENST00000547263 KSR2Q6VAB6 950 aa14.06□□□□□ -0.16
GCN1-202ENST00000547263 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
GCN1-202ENST00000547263 CNKSR1Q969H4 720 aa14.06□□□□□ -0.16
GCN1-202ENST00000547263 ZNF428Q96B54 188 aa14.06□□□□□ -0.16
GCN1-202ENST00000547263 CDCA7LQ96GN5 454 aa14.06□□□□□ -0.16
GCN1-202ENST00000547263 UTP14AQ9BVJ6 771 aaKnown RBP14.06□□□□□ -0.16
GCN1-202ENST00000547263 STK31Q9BXU1 1019 aa14.06□□□□□ -0.16
GCN1-202ENST00000547263 DICER1Q9UPY3 1922 aaKnown RBP14.05□□□□□ -0.16
GCN1-202ENST00000547263 FLIIQ13045 1269 aa14.05□□□□□ -0.16
GCN1-202ENST00000547263 CCDC191Q8NCU4 936 aa14.05□□□□□ -0.16
GCN1-202ENST00000547263 LTBP3Q9NS15 1303 aa14.05□□□□□ -0.16
GCN1-202ENST00000547263 LRRC37AA6NMS7 1700 aa14.04□□□□□ -0.16
GCN1-202ENST00000547263 DDX58O95786 925 aaKnown RBP14.04□□□□□ -0.16
GCN1-202ENST00000547263 IGKV5-2P06315 115 aa14.04□□□□□ -0.16
GCN1-202ENST00000547263 YY1P25490 414 aa14.04□□□□□ -0.16
GCN1-202ENST00000547263 C3orf67Q6ZVT6 689 aa14.04□□□□□ -0.16
GCN1-202ENST00000547263 RIC3Q7Z5B4 369 aa14.04□□□□□ -0.16
GCN1-202ENST00000547263 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
GCN1-202ENST00000547263 WWC3Q9ULE0 1092 aa14.04□□□□□ -0.16
GCN1-202ENST00000547263 SH3TC1Q8TE82 1336 aa14.04□□□□□ -0.16
GCN1-202ENST00000547263 CCDC88AQ3V6T2 1871 aa14.04□□□□□ -0.16
GCN1-202ENST00000547263 PI4KAP2A4QPH2 592 aa14.03□□□□□ -0.16
GCN1-202ENST00000547263 FAM177BA6PVY3 158 aa14.03□□□□□ -0.16
GCN1-202ENST00000547263 CT47B1P0C2W7 299 aaPredicted RBP14.03□□□□□ -0.16
GCN1-202ENST00000547263 PRELPP51888 382 aa14.03□□□□□ -0.16
GCN1-202ENST00000547263 PRPF40BQ6NWY9 871 aaKnown RBP14.03□□□□□ -0.16
GCN1-202ENST00000547263 SYNE4Q8N205 404 aa14.03□□□□□ -0.16
GCN1-202ENST00000547263 PI4KAP1Q8N8J0 262 aa14.03□□□□□ -0.16
GCN1-202ENST00000547263 MAP3K2Q9Y2U5 619 aa14.03□□□□□ -0.16
GCN1-202ENST00000547263 MYH3P11055 1940 aa14.02□□□□□ -0.16
GCN1-202ENST00000547263 ATP5J2-PTCD1G3V325 749 aa14.02□□□□□ -0.17
GCN1-202ENST00000547263 NFKBIEO00221 500 aa14.02□□□□□ -0.17
GCN1-202ENST00000547263 TCERG1O14776 1098 aaKnown RBP14.02□□□□□ -0.17
GCN1-202ENST00000547263 BRPF1P55201 1214 aaPredicted RBP14.02□□□□□ -0.17
GCN1-202ENST00000547263 SF3B3Q15393 1217 aaKnown RBP14.02□□□□□ -0.17
GCN1-202ENST00000547263 ZBTB38Q8NAP3 1195 aaPredicted RBP14.02□□□□□ -0.17
GCN1-202ENST00000547263 ZNF622Q969S3 477 aaKnown RBP eCLIP14.02□□□□□ -0.17
GCN1-202ENST00000547263 TRMT112Q9UI30 125 aaKnown RBP14.02□□□□□ -0.17
GCN1-202ENST00000547263 COL4A1P02462 1669 aa14.01□□□□□ -0.17
GCN1-202ENST00000547263 CDHR2Q9BYE9 1310 aa14.01□□□□□ -0.17
GCN1-202ENST00000547263 NPHP1O15259 732 aa14.01□□□□□ -0.17
GCN1-202ENST00000547263 PCCAP05165 728 aaPredicted RBP14.01□□□□□ -0.17
GCN1-202ENST00000547263 GTF2E1P29083 439 aaPredicted RBP14.01□□□□□ -0.17
GCN1-202ENST00000547263 ALDH1B1P30837 517 aa14.01□□□□□ -0.17
GCN1-202ENST00000547263 NLRP3Q96P20 1036 aa14.01□□□□□ -0.17
GCN1-202ENST00000547263 TAF1P21675 1872 aa14□□□□□ -0.17
GCN1-202ENST00000547263 NEURL1BA8MQ27 555 aa14□□□□□ -0.17
GCN1-202ENST00000547263 ALDH1L2Q3SY69 923 aa14□□□□□ -0.17
GCN1-202ENST00000547263 SOGA3Q5TF21 947 aa14□□□□□ -0.17
GCN1-202ENST00000547263 MRPL50Q8N5N7 158 aaKnown RBP14□□□□□ -0.17
GCN1-202ENST00000547263 DNAAF4Q8WXU2 420 aa14□□□□□ -0.17
GCN1-202ENST00000547263 FAM89AQ96GI7 184 aa14□□□□□ -0.17
GCN1-202ENST00000547263 MYD88Q99836 296 aa14□□□□□ -0.17
GCN1-202ENST00000547263 LTBP1Q14766 1721 aa14□□□□□ -0.17
GCN1-202ENST00000547263 TIAM2Q8IVF5 1701 aa14□□□□□ -0.17
GCN1-202ENST00000547263 ZC3H4Q9UPT8 1303 aaKnown RBP13.99□□□□□ -0.17
GCN1-202ENST00000547263 H7C1W4 665 aa13.99□□□□□ -0.17
GCN1-202ENST00000547263 C21orf2O43822 256 aa13.99□□□□□ -0.17
GCN1-202ENST00000547263 CASP7P55210 303 aa13.99□□□□□ -0.17
GCN1-202ENST00000547263 ARHGAP27Q6ZUM4 889 aa13.99□□□□□ -0.17
GCN1-202ENST00000547263 ZNF784Q8NCA9 323 aaPredicted RBP13.99□□□□□ -0.17
GCN1-202ENST00000547263 LINS1Q8NG48 757 aa13.99□□□□□ -0.17
GCN1-202ENST00000547263 CWC25Q9NXE8 425 aaPredicted RBP13.99□□□□□ -0.17
GCN1-202ENST00000547263 ZBED9Q6R2W3 1325 aa13.98□□□□□ -0.17
GCN1-202ENST00000547263 HCLS1P14317 486 aaPredicted RBP13.98□□□□□ -0.17
GCN1-202ENST00000547263 FKBP5Q13451 457 aaPredicted RBP13.98□□□□□ -0.17
GCN1-202ENST00000547263 BEND3Q5T5X7 828 aa13.98□□□□□ -0.17
GCN1-202ENST00000547263 CC2D2BQ6DHV5 1058 aa13.98□□□□□ -0.17
GCN1-202ENST00000547263 SSH1Q8WYL5 1049 aa13.98□□□□□ -0.17
GCN1-202ENST00000547263 ABCC4O15439 1325 aa13.97□□□□□ -0.17
GCN1-202ENST00000547263 IRS4O14654 1257 aaPredicted RBP13.97□□□□□ -0.17
GCN1-202ENST00000547263 RASSF7Q02833 373 aa13.97□□□□□ -0.17
GCN1-202ENST00000547263 CWF19L2Q2TBE0 894 aaKnown RBP13.97□□□□□ -0.17
GCN1-202ENST00000547263 RBM17Q96I25 401 aaKnown RBP13.97□□□□□ -0.17
GCN1-202ENST00000547263 PLA2G12BQ9BX93 195 aa13.97□□□□□ -0.17
GCN1-202ENST00000547263 RTL9Q8NET4 1388 aa13.96□□□□□ -0.17
GCN1-202ENST00000547263 DUOX1Q9NRD9 1551 aa13.96□□□□□ -0.17
GCN1-202ENST00000547263 PTPRCP08575 1304 aa13.96□□□□□ -0.17
GCN1-202ENST00000547263 LMNB1P20700 586 aa13.96□□□□□ -0.17
GCN1-202ENST00000547263 NEXNQ0ZGT2 675 aa13.96□□□□□ -0.17
GCN1-202ENST00000547263 GCKRQ14397 625 aa13.96□□□□□ -0.17
GCN1-202ENST00000547263 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
GCN1-202ENST00000547263 CCDC93Q567U6 631 aa13.96□□□□□ -0.17
GCN1-202ENST00000547263 RPGRQ92834 1020 aaKnown RBP13.96□□□□□ -0.17
GCN1-202ENST00000547263 PSMD1Q99460 953 aa13.96□□□□□ -0.17
GCN1-202ENST00000547263 F6X3S4 739 aa13.95□□□□□ -0.18
GCN1-202ENST00000547263 PDE8AO60658 829 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms