RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 CD33P20138 364 aa11.16□□□□□ -0.62
CHPT1-203ENST00000546873 MARK1Q9P0L2 795 aa11.16□□□□□ -0.62
CHPT1-203ENST00000546873 COL17A1Q9UMD9 1497 aaPredicted RBP11.16□□□□□ -0.62
CHPT1-203ENST00000546873 FHAD1B1AJZ9 1412 aa11.16□□□□□ -0.62
CHPT1-203ENST00000546873 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
CHPT1-203ENST00000546873 HCN4Q9Y3Q4 1203 aa11.15□□□□□ -0.62
CHPT1-203ENST00000546873 ATAD2Q6PL18 1390 aa11.15□□□□□ -0.63
CHPT1-203ENST00000546873 KIF21BO75037 1637 aa11.14□□□□□ -0.63
CHPT1-203ENST00000546873 ADH6P28332 368 aa11.14□□□□□ -0.63
CHPT1-203ENST00000546873 GSK3AP49840 483 aa11.14□□□□□ -0.63
CHPT1-203ENST00000546873 KCTD17Q8N5Z5 321 aa11.14□□□□□ -0.63
CHPT1-203ENST00000546873 SCG3Q8WXD2 468 aaKnown RBP11.14□□□□□ -0.63
CHPT1-203ENST00000546873 AVENQ9NQS1 362 aaPredicted RBP11.14□□□□□ -0.63
CHPT1-203ENST00000546873 CNTNAP5Q8WYK1 1306 aa11.13□□□□□ -0.63
CHPT1-203ENST00000546873 FAM196BA6NMK8 535 aa11.13□□□□□ -0.63
CHPT1-203ENST00000546873 NEURL1BA8MQ27 555 aa11.13□□□□□ -0.63
CHPT1-203ENST00000546873 DPYDQ12882 1025 aa11.13□□□□□ -0.63
CHPT1-203ENST00000546873 KANK4Q5T7N3 995 aaPredicted RBP11.13□□□□□ -0.63
CHPT1-203ENST00000546873 ANKMY2Q8IV38 441 aa11.13□□□□□ -0.63
CHPT1-203ENST00000546873 PHACTR1Q9C0D0 580 aa11.13□□□□□ -0.63
CHPT1-203ENST00000546873 MKL2Q9ULH7 1088 aa11.13□□□□□ -0.63
CHPT1-203ENST00000546873 PPRC1Q5VV67 1664 aaKnown RBP11.13□□□□□ -0.63
CHPT1-203ENST00000546873 GOLGA3Q08378 1498 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 SHISA8B8ZZ34 492 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L10C9JJH3 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L21D6R901 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L17D6RBQ6 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L19D6RCP7 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L20D6RJB6 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 PIK3R2O00459 728 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 USP17L24Q0WX57 530 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 PTK7Q13308 1070 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 HIF1AQ16665 826 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 CRTC2Q53ET0 693 aaPredicted RBP11.12□□□□□ -0.63
CHPT1-203ENST00000546873 SH3PXD2AQ5TCZ1 1133 aa11.12□□□□□ -0.63
CHPT1-203ENST00000546873 KIF27Q86VH2 1401 aa11.11□□□□□ -0.63
CHPT1-203ENST00000546873 DKK1O94907 266 aa11.11□□□□□ -0.63
CHPT1-203ENST00000546873 STAG2Q8N3U4 1231 aa11.11□□□□□ -0.63
CHPT1-203ENST00000546873 EFSO43281 561 aa11.1□□□□□ -0.63
CHPT1-203ENST00000546873 EPXP11678 715 aa11.1□□□□□ -0.63
CHPT1-203ENST00000546873 RFX1P22670 979 aa11.1□□□□□ -0.63
CHPT1-203ENST00000546873 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
CHPT1-203ENST00000546873 CEP63Q96MT8 703 aa11.1□□□□□ -0.63
CHPT1-203ENST00000546873 RUSC2Q8N2Y8 1516 aa11.09□□□□□ -0.63
CHPT1-203ENST00000546873 LOC105371045A0A1W2PR82 267 aa11.09□□□□□ -0.63
CHPT1-203ENST00000546873 ZNF468Q5VIY5 522 aaPredicted RBP11.09□□□□□ -0.63
CHPT1-203ENST00000546873 POTEAQ6S8J7 498 aa11.09□□□□□ -0.63
CHPT1-203ENST00000546873 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
CHPT1-203ENST00000546873 C21orf2O43822 256 aa11.08□□□□□ -0.64
CHPT1-203ENST00000546873 ALDH16A1Q8IZ83 802 aa11.08□□□□□ -0.64
CHPT1-203ENST00000546873 PCBP4P57723 403 aaKnown RBP11.07□□□□□ -0.64
CHPT1-203ENST00000546873 FAM200AQ8TCP9 573 aa11.07□□□□□ -0.64
CHPT1-203ENST00000546873 NGLY1Q96IV0 654 aa11.07□□□□□ -0.64
CHPT1-203ENST00000546873 BTBD6Q96KE9 485 aa11.07□□□□□ -0.64
CHPT1-203ENST00000546873 C2orf49Q9BVC5 232 aaPredicted RBP11.07□□□□□ -0.64
CHPT1-203ENST00000546873 ERICH3Q5RHP9 1530 aa11.06□□□□□ -0.64
CHPT1-203ENST00000546873 IGFBP4P22692 258 aa11.06□□□□□ -0.64
CHPT1-203ENST00000546873 SNRPNP63162 240 aaKnown RBP11.06□□□□□ -0.64
CHPT1-203ENST00000546873 CFAP70Q5T0N1 1121 aa11.06□□□□□ -0.64
CHPT1-203ENST00000546873 C7orf43Q8WVR3 580 aa11.06□□□□□ -0.64
CHPT1-203ENST00000546873 VTI1AQ96AJ9 217 aa11.06□□□□□ -0.64
CHPT1-203ENST00000546873 HSH2DQ96JZ2 352 aa11.06□□□□□ -0.64
CHPT1-203ENST00000546873 SUSD3Q96L08 255 aa11.06□□□□□ -0.64
CHPT1-203ENST00000546873 STRN4Q9NRL3 753 aa11.06□□□□□ -0.64
CHPT1-203ENST00000546873 TTBK1Q5TCY1 1321 aaPredicted RBP11.06□□□□□ -0.64
CHPT1-203ENST00000546873 DISP3Q9P2K9 1392 aa11.05□□□□□ -0.64
CHPT1-203ENST00000546873 ALAS2P22557 587 aa11.05□□□□□ -0.64
CHPT1-203ENST00000546873 ASXL2Q76L83 1435 aa11.05□□□□□ -0.64
CHPT1-203ENST00000546873 BRD7Q9NPI1 651 aa11.05□□□□□ -0.64
CHPT1-203ENST00000546873 IGHA1P01876 353 aa11.04□□□□□ -0.64
CHPT1-203ENST00000546873 GLI2P10070 1586 aa11.03□□□□□ -0.64
CHPT1-203ENST00000546873 SFSWAPQ12872 951 aaKnown RBP11.03□□□□□ -0.64
CHPT1-203ENST00000546873 RTN1Q16799 776 aa11.03□□□□□ -0.64
CHPT1-203ENST00000546873 CDCA8Q53HL2 280 aa11.03□□□□□ -0.64
CHPT1-203ENST00000546873 GPAT2Q6NUI2 795 aa11.03□□□□□ -0.64
CHPT1-203ENST00000546873 SYT9Q86SS6 491 aa11.03□□□□□ -0.64
CHPT1-203ENST00000546873 ALYREFQ86V81 257 aaKnown RBP11.03□□□□□ -0.64
CHPT1-203ENST00000546873 DCAF5Q96JK2 942 aa11.03□□□□□ -0.64
CHPT1-203ENST00000546873 ZMYND15Q9H091 742 aa11.03□□□□□ -0.64
CHPT1-203ENST00000546873 HCN2Q9UL51 889 aa11.03□□□□□ -0.64
CHPT1-203ENST00000546873 KCNH4Q9UQ05 1017 aa11.03□□□□□ -0.64
CHPT1-203ENST00000546873 LGR5O75473 907 aa11.02□□□□□ -0.65
CHPT1-203ENST00000546873 SPEM2Q0P670 501 aa11.02□□□□□ -0.65
CHPT1-203ENST00000546873 CHSY3Q70JA7 882 aa11.02□□□□□ -0.65
CHPT1-203ENST00000546873 FCHSD1Q86WN1 690 aa11.02□□□□□ -0.65
CHPT1-203ENST00000546873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
CHPT1-203ENST00000546873 KLF15Q9UIH9 416 aa11.02□□□□□ -0.65
CHPT1-203ENST00000546873 TNIKQ9UKE5 1360 aa11.02□□□□□ -0.65
CHPT1-203ENST00000546873 GNB5O14775 395 aa11.01□□□□□ -0.65
CHPT1-203ENST00000546873 ZNF280CQ8ND82 737 aa11.01□□□□□ -0.65
CHPT1-203ENST00000546873 ABCC2Q92887 1545 aa11□□□□□ -0.65
CHPT1-203ENST00000546873 ELOA3CA0A087WX78 387 aaPredicted RBP11□□□□□ -0.65
CHPT1-203ENST00000546873 ELOA3DA6NLF2 546 aaPredicted RBP11□□□□□ -0.65
CHPT1-203ENST00000546873 SIN3BO75182 1162 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms