RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 NLRP10Q86W26 655 aa12.58□□□□□ -0.4
CIT-218ENST00000546026 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
CIT-218ENST00000546026 ZBTB38Q8NAP3 1195 aaPredicted RBP12.58□□□□□ -0.4
CIT-218ENST00000546026 PLA2G12BQ9BX93 195 aa12.58□□□□□ -0.4
CIT-218ENST00000546026 RBM19Q9Y4C8 960 aaKnown RBP12.58□□□□□ -0.4
CIT-218ENST00000546026 ANKRD36CQ5JPF3 1778 aa12.58□□□□□ -0.4
CIT-218ENST00000546026 CDHR2Q9BYE9 1310 aa12.58□□□□□ -0.4
CIT-218ENST00000546026 SMARCA5O60264 1052 aaPredicted RBP12.57□□□□□ -0.4
CIT-218ENST00000546026 BMP2KLQ5H9B9 411 aa12.57□□□□□ -0.4
CIT-218ENST00000546026 SLC27A3Q5K4L6 730 aa12.57□□□□□ -0.4
CIT-218ENST00000546026 RHPN1Q8TCX5 695 aa12.57□□□□□ -0.4
CIT-218ENST00000546026 JARID2Q92833 1246 aaPredicted RBP12.57□□□□□ -0.4
CIT-218ENST00000546026 OSBPL3Q9H4L5 887 aa12.57□□□□□ -0.4
CIT-218ENST00000546026 COPRSQ9NQ92 184 aa12.57□□□□□ -0.4
CIT-218ENST00000546026 ZNF652Q9Y2D9 606 aa12.57□□□□□ -0.4
CIT-218ENST00000546026 APBB1O00213 710 aa12.56□□□□□ -0.4
CIT-218ENST00000546026 G3BP1Q13283 466 aaKnown RBP eCLIP12.56□□□□□ -0.4
CIT-218ENST00000546026 PARP10Q53GL7 1025 aa12.56□□□□□ -0.4
CIT-218ENST00000546026 C16orf71Q8IYS4 520 aaPredicted RBP12.56□□□□□ -0.4
CIT-218ENST00000546026 RGS17Q9UGC6 210 aaPredicted RBP12.56□□□□□ -0.4
CIT-218ENST00000546026 TAF1LQ8IZX4 1826 aa12.55□□□□□ -0.4
CIT-218ENST00000546026 TRIM37O94972 964 aa12.55□□□□□ -0.4
CIT-218ENST00000546026 GPTP24298 496 aa12.55□□□□□ -0.4
CIT-218ENST00000546026 RFX5P48382 616 aaPredicted RBP12.55□□□□□ -0.4
CIT-218ENST00000546026 LMBR1LQ6UX01 489 aa12.55□□□□□ -0.4
CIT-218ENST00000546026 AK7Q96M32 723 aa12.55□□□□□ -0.4
CIT-218ENST00000546026 RTCBQ9Y3I0 505 aaKnown RBP12.55□□□□□ -0.4
CIT-218ENST00000546026 SALL3Q9BXA9 1300 aa12.55□□□□□ -0.4
CIT-218ENST00000546026 CSF1RP07333 972 aa12.54□□□□□ -0.4
CIT-218ENST00000546026 HSP90B1P14625 803 aaKnown RBP12.54□□□□□ -0.4
CIT-218ENST00000546026 KCNQ4P56696 695 aa12.54□□□□□ -0.4
CIT-218ENST00000546026 PTPN12Q05209 780 aaKnown RBP12.54□□□□□ -0.4
CIT-218ENST00000546026 OS9Q13438 667 aaPredicted RBP12.54□□□□□ -0.4
CIT-218ENST00000546026 STAP2Q9UGK3 403 aa12.54□□□□□ -0.4
CIT-218ENST00000546026 NARFQ9UHQ1 456 aa12.54□□□□□ -0.4
CIT-218ENST00000546026 TRMT112Q9UI30 125 aaKnown RBP12.54□□□□□ -0.4
CIT-218ENST00000546026 AOX1Q06278 1338 aa12.54□□□□□ -0.4
CIT-218ENST00000546026 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
CIT-218ENST00000546026 PLSCR1O15162 318 aa12.53□□□□□ -0.4
CIT-218ENST00000546026 GNPATO15228 680 aa12.53□□□□□ -0.4
CIT-218ENST00000546026 PDE1AP54750 535 aa12.53□□□□□ -0.4
CIT-218ENST00000546026 TTC22Q5TAA0 569 aa12.53□□□□□ -0.4
CIT-218ENST00000546026 POTEAQ6S8J7 498 aa12.53□□□□□ -0.4
CIT-218ENST00000546026 FAM89AQ96GI7 184 aa12.53□□□□□ -0.4
CIT-218ENST00000546026 UTP14AQ9BVJ6 771 aaKnown RBP12.53□□□□□ -0.4
CIT-218ENST00000546026 FBXO3Q9UK99 471 aa12.53□□□□□ -0.4
CIT-218ENST00000546026 PA2G4Q9UQ80 394 aaKnown RBP12.53□□□□□ -0.4
CIT-218ENST00000546026 UBN2Q6ZU65 1347 aa12.53□□□□□ -0.4
CIT-218ENST00000546026 C4BP0C0L5 1744 aa12.53□□□□□ -0.4
CIT-218ENST00000546026 IRS4O14654 1257 aaPredicted RBP12.52□□□□□ -0.41
CIT-218ENST00000546026 PDE8AO60658 829 aa12.52□□□□□ -0.41
CIT-218ENST00000546026 ADRA2BP18089 450 aa12.52□□□□□ -0.41
CIT-218ENST00000546026 RTL5Q5HYW3 569 aaPredicted RBP12.52□□□□□ -0.41
CIT-218ENST00000546026 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
CIT-218ENST00000546026 SUSD4Q5VX71 490 aa12.52□□□□□ -0.41
CIT-218ENST00000546026 CLASRPQ8N2M8 674 aaKnown RBP12.52□□□□□ -0.41
CIT-218ENST00000546026 OTUD7AQ8TE49 926 aaPredicted RBP12.52□□□□□ -0.41
CIT-218ENST00000546026 LRRC4BQ9NT99 713 aa12.52□□□□□ -0.41
CIT-218ENST00000546026 NIP7Q9Y221 180 aaKnown RBP eCLIP12.52□□□□□ -0.41
CIT-218ENST00000546026 EIF5BO60841 1220 aaKnown RBP12.51□□□□□ -0.41
CIT-218ENST00000546026 ZPR1O75312 459 aa12.51□□□□□ -0.41
CIT-218ENST00000546026 CIAO1O76071 339 aa12.51□□□□□ -0.41
CIT-218ENST00000546026 SASH1O94885 1247 aa12.51□□□□□ -0.41
CIT-218ENST00000546026 MX1P20591 662 aa12.51□□□□□ -0.41
CIT-218ENST00000546026 IL1RAPL2Q9NP60 686 aa12.51□□□□□ -0.41
CIT-218ENST00000546026 SH3TC1Q8TE82 1336 aa12.51□□□□□ -0.41
CIT-218ENST00000546026 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
CIT-218ENST00000546026 TXNRD1Q16881 649 aa12.5□□□□□ -0.41
CIT-218ENST00000546026 CCDC57Q2TAC2 916 aa12.5□□□□□ -0.41
CIT-218ENST00000546026 TTLL11Q8NHH1 800 aa12.5□□□□□ -0.41
CIT-218ENST00000546026 ARHGEF1Q92888 912 aaKnown RBP12.5□□□□□ -0.41
CIT-218ENST00000546026 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
CIT-218ENST00000546026 CHMP3Q9Y3E7 222 aa12.5□□□□□ -0.41
CIT-218ENST00000546026 SCN7AQ01118 1682 aa12.5□□□□□ -0.41
CIT-218ENST00000546026 TTC41PQ6P2S7 1318 aa12.49□□□□□ -0.41
CIT-218ENST00000546026 EYA2O00167 538 aa12.49□□□□□ -0.41
CIT-218ENST00000546026 NTSR2O95665 410 aa12.49□□□□□ -0.41
CIT-218ENST00000546026 APBA3O96018 575 aa12.49□□□□□ -0.41
CIT-218ENST00000546026 GSPT1P15170 499 aaKnown RBP12.49□□□□□ -0.41
CIT-218ENST00000546026 RFC4P35249 363 aa12.49□□□□□ -0.41
CIT-218ENST00000546026 IL15P40933 162 aaPredicted RBP12.49□□□□□ -0.41
CIT-218ENST00000546026 CTSWP56202 376 aa12.49□□□□□ -0.41
CIT-218ENST00000546026 USPL1Q5W0Q7 1092 aa12.49□□□□□ -0.41
CIT-218ENST00000546026 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
CIT-218ENST00000546026 KLHDC4Q8TBB5 520 aa12.49□□□□□ -0.41
CIT-218ENST00000546026 SIL1Q9H173 461 aa12.49□□□□□ -0.41
CIT-218ENST00000546026 GPR108Q9NPR9 543 aa12.49□□□□□ -0.41
CIT-218ENST00000546026 ANKRD18BA2A2Z9 1011 aa12.48□□□□□ -0.41
CIT-218ENST00000546026 CDC45O75419 566 aa12.48□□□□□ -0.41
CIT-218ENST00000546026 IFIT2P09913 472 aaKnown RBP12.48□□□□□ -0.41
CIT-218ENST00000546026 SSFA2P28290 1259 aa12.48□□□□□ -0.41
CIT-218ENST00000546026 IFIT5Q13325 482 aaKnown RBP12.48□□□□□ -0.41
CIT-218ENST00000546026 SLC10A5Q5PT55 438 aa12.48□□□□□ -0.41
CIT-218ENST00000546026 NUTM1Q86Y26 1132 aa12.48□□□□□ -0.41
CIT-218ENST00000546026 PROM2Q8N271 834 aa12.48□□□□□ -0.41
CIT-218ENST00000546026 GPATCH3Q96I76 525 aa12.48□□□□□ -0.41
CIT-218ENST00000546026 NYXQ9GZU5 481 aa12.48□□□□□ -0.41
CIT-218ENST00000546026 BCL11AQ9H165 835 aa12.48□□□□□ -0.41
CIT-218ENST00000546026 MYH3P11055 1940 aa12.47□□□□□ -0.41
CIT-218ENST00000546026 ERC2O15083 957 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms