RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 RBM8AQ9Y5S9 174 aaKnown RBP4.55□□□□□ -1.68
BRCA2-206ENST00000544455 HSPA4P34932 840 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 FAM89AQ96GI7 184 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 BABAM1Q9NWV8 329 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 RBSNQ9H1K0 784 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 BTG4Q9NY30 223 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 FSD2A1L4K1 749 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 PRIM1P49642 420 aaKnown RBP4.54□□□□□ -1.68
BRCA2-206ENST00000544455 PLCB2Q00722 1185 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 DDX11Q96FC9 970 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 DBNLQ9UJU6 430 aaKnown RBP4.54□□□□□ -1.68
BRCA2-206ENST00000544455 ALDH1L1O75891 902 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 GLRX3O76003 335 aaKnown RBP4.54□□□□□ -1.68
BRCA2-206ENST00000544455 ST3GAL1Q11201 340 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 ACSBG1Q96GR2 724 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 PDRG1Q9NUG6 133 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 SLAIN2Q9P270 581 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 NUTM2BA6NNL0 878 aaPredicted RBP4.54□□□□□ -1.68
BRCA2-206ENST00000544455 NUTM2EB1AL46 878 aaPredicted RBP4.54□□□□□ -1.68
BRCA2-206ENST00000544455 GOLIM4O00461 696 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 HSP90AB4PQ58FF6 505 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 NUTM2AQ8IVF1 878 aaPredicted RBP4.54□□□□□ -1.68
BRCA2-206ENST00000544455 STK11IPQ8N1F8 1099 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 CYP2E1P05181 493 aaPredicted RBP4.54□□□□□ -1.68
BRCA2-206ENST00000544455 MRE11P49959 708 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 LRP10Q7Z4F1 713 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 ME3Q16798 604 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 CIZ1Q9ULV3 898 aaPredicted RBP4.54□□□□□ -1.68
BRCA2-206ENST00000544455 HOXB7P09629 217 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 HEG1Q9ULI3 1381 aa4.54□□□□□ -1.68
BRCA2-206ENST00000544455 LRRC37A3O60309 1634 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 SNAP23O00161 211 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 NUCB2P80303 420 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 KLHL40Q2TBA0 621 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 TNNI3KQ59H18 835 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 FPGT-TNNI3KV9GXZ4 949 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 USP48Q86UV5 1035 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 RAD50Q92878 1312 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 ADAMTS2O95450 1211 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 RFX5P48382 616 aaPredicted RBP4.53□□□□□ -1.68
BRCA2-206ENST00000544455 TPCN1Q9ULQ1 816 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 FIBPO43427 364 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 NECTIN1Q15223 517 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 CADPS2Q86UW7 1296 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 SLC27A2O14975 620 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 DNAJC10Q8IXB1 793 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 TBC1D2BQ9UPU7 963 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 TNS3Q68CZ2 1445 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 MARF1Q9Y4F3 1742 aaKnown RBP4.53□□□□□ -1.68
BRCA2-206ENST00000544455 HSP90B1P14625 803 aaKnown RBP4.53□□□□□ -1.68
BRCA2-206ENST00000544455 CEBPZQ03701 1054 aaKnown RBP4.53□□□□□ -1.68
BRCA2-206ENST00000544455 CYP46A1Q9Y6A2 500 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 FKBP4Q02790 459 aaKnown RBP eCLIP4.53□□□□□ -1.68
BRCA2-206ENST00000544455 CAMK4Q16566 473 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 CREB3L3Q68CJ9 461 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 TTLL5Q6EMB2 1281 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 EVI5LQ96CN4 794 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 SLIT3O75094 1523 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 COL15A1P39059 1388 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 BRD1O95696 1058 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 DNM1Q05193 864 aaKnown RBP4.53□□□□□ -1.68
BRCA2-206ENST00000544455 MTX1Q13505 466 aa4.53□□□□□ -1.68
BRCA2-206ENST00000544455 HELBQ8NG08 1087 aaPredicted RBP4.53□□□□□ -1.68
BRCA2-206ENST00000544455 CCDC171Q6TFL3 1326 aa4.53□□□□□ -1.69
BRCA2-206ENST00000544455 SYT1P21579 422 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 FOXO4P98177 505 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 SMC3Q9UQE7 1217 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 PXDNLA1KZ92 1463 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 SKOR2Q2VWA4 1001 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-206ENST00000544455 PLBD2Q8NHP8 589 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 CWC22Q9HCG8 908 aaKnown RBP4.52□□□□□ -1.69
BRCA2-206ENST00000544455 TTC41PQ6P2S7 1318 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 TRIM44Q96DX7 344 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-206ENST00000544455 TMOD3Q9NYL9 352 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 DLG5Q8TDM6 1919 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 TTC14Q96N46 770 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 HAND2P61296 217 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 HLFQ16534 295 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 RPAP1Q9BWH6 1393 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-206ENST00000544455 PCDH11XQ9BZA7 1347 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 PCDH11YQ9BZA8 1340 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 KDM4FA0A1W2PPD8 638 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 IL2RBP14784 551 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 GPATCH3Q96I76 525 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 FAM182BQ5T319 152 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 TFIP11Q9UBB9 837 aaKnown RBP4.52□□□□□ -1.69
BRCA2-206ENST00000544455 WDR17Q8IZU2 1322 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 ATG9AQ7Z3C6 839 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 NASPP49321 788 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-206ENST00000544455 GUCY1B3Q02153 619 aa4.52□□□□□ -1.69
BRCA2-206ENST00000544455 GPHNQ9NQX3 736 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-206ENST00000544455 FAM208AQ9UK61 1670 aaKnown RBP4.52□□□□□ -1.69
BRCA2-206ENST00000544455 STX6O43752 255 aa4.51□□□□□ -1.69
BRCA2-206ENST00000544455 NAP1L5Q96NT1 182 aaPredicted RBP4.51□□□□□ -1.69
BRCA2-206ENST00000544455 NCOA5Q9HCD5 579 aaKnown RBP4.51□□□□□ -1.69
BRCA2-206ENST00000544455 CUL4AQ13619 759 aa4.51□□□□□ -1.69
BRCA2-206ENST00000544455 SCARF1Q14162 830 aa4.51□□□□□ -1.69
BRCA2-206ENST00000544455 RUFY2Q8WXA3 655 aa4.51□□□□□ -1.69
BRCA2-206ENST00000544455 CDC37L1Q7L3B6 337 aa4.51□□□□□ -1.69
BRCA2-206ENST00000544455 FTOQ9C0B1 505 aaKnown RBP eCLIP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms