RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 PDIA6Q15084 440 aa36.07■■■■□ 3.36
PDCD2-211ENST00000544336 TCERG1O14776 1098 aaKnown RBP36.06■■■■□ 3.36
PDCD2-211ENST00000544336 SNED1Q8TER0 1413 aa36.06■■■■□ 3.36
PDCD2-211ENST00000544336 EAPPQ56P03 285 aaPredicted RBP36.05■■■■□ 3.36
PDCD2-211ENST00000544336 C3orf67Q6ZVT6 689 aa36.05■■■■□ 3.36
PDCD2-211ENST00000544336 LRP10Q7Z4F1 713 aa36.05■■■■□ 3.36
PDCD2-211ENST00000544336 PPP1R42Q7Z4L9 355 aa36.05■■■■□ 3.36
PDCD2-211ENST00000544336 SLC51AQ86UW1 340 aa36.05■■■■□ 3.36
PDCD2-211ENST00000544336 MYBBP1AQ9BQG0 1328 aaKnown RBP36.05■■■■□ 3.36
PDCD2-211ENST00000544336 HOXA10P31260 410 aaPredicted RBP36.04■■■■□ 3.36
PDCD2-211ENST00000544336 COL13A1Q5TAT6 717 aaPredicted RBP36.04■■■■□ 3.36
PDCD2-211ENST00000544336 LDHDQ86WU2 507 aa36.04■■■■□ 3.36
PDCD2-211ENST00000544336 RBM17Q96I25 401 aaKnown RBP36.04■■■■□ 3.36
PDCD2-211ENST00000544336 PSMD1Q99460 953 aa36.04■■■■□ 3.36
PDCD2-211ENST00000544336 PCNTO95613 3336 aa36.04■■■■□ 3.36
PDCD2-211ENST00000544336 BABAM1Q9NWV8 329 aa36.03■■■■□ 3.36
PDCD2-211ENST00000544336 HACL1Q9UJ83 578 aa36.03■■■■□ 3.36
PDCD2-211ENST00000544336 FZD9O00144 591 aa36.02■■■■□ 3.36
PDCD2-211ENST00000544336 PARP10Q53GL7 1025 aa36.02■■■■□ 3.36
PDCD2-211ENST00000544336 JDP2Q8WYK2 163 aa36.02■■■■□ 3.36
PDCD2-211ENST00000544336 RNF123Q5XPI4 1314 aa36.02■■■■□ 3.36
PDCD2-211ENST00000544336 PPEF1O14829 653 aaPredicted RBP36.01■■■■□ 3.36
PDCD2-211ENST00000544336 CC2D2BQ6DHV5 1058 aa36.01■■■■□ 3.36
PDCD2-211ENST00000544336 CREBZFQ9NS37 354 aa36.01■■■■□ 3.36
PDCD2-211ENST00000544336 ANKRD36CQ5JPF3 1778 aa36.01■■■■□ 3.35
PDCD2-211ENST00000544336 COL4A5P29400 1685 aa36■■■■□ 3.35
PDCD2-211ENST00000544336 AIMP1Q12904 312 aaKnown RBP36■■■■□ 3.35
PDCD2-211ENST00000544336 CRAMP1Q96RY5 1269 aa36■■■■□ 3.35
PDCD2-211ENST00000544336 MKRN1Q9UHC7 482 aaKnown RBP36■■■■□ 3.35
PDCD2-211ENST00000544336 CLEC11AQ9Y240 323 aa36■■■■□ 3.35
PDCD2-211ENST00000544336 LAS1LQ9Y4W2 734 aaKnown RBP36■■■■□ 3.35
PDCD2-211ENST00000544336 HSPA1AP0DMV8 641 aaKnown RBP35.99■■■■□ 3.35
PDCD2-211ENST00000544336 HSPA1BP0DMV9 641 aaKnown RBP35.99■■■■□ 3.35
PDCD2-211ENST00000544336 EPHX2P34913 555 aa35.99■■■■□ 3.35
PDCD2-211ENST00000544336 UTP14AQ9BVJ6 771 aaKnown RBP35.99■■■■□ 3.35
PDCD2-211ENST00000544336 KRT24Q2M2I5 525 aa35.98■■■■□ 3.35
PDCD2-211ENST00000544336 NLRP3Q96P20 1036 aa35.98■■■■□ 3.35
PDCD2-211ENST00000544336 WDR43Q15061 677 aaKnown RBP eCLIP35.97■■■■□ 3.35
PDCD2-211ENST00000544336 COPS6Q7L5N1 327 aa35.97■■■■□ 3.35
PDCD2-211ENST00000544336 XAGE3Q8WTP9 111 aa35.97■■■■□ 3.35
PDCD2-211ENST00000544336 GJA3Q9Y6H8 435 aa35.97■■■■□ 3.35
PDCD2-211ENST00000544336 GPC2Q8N158 579 aa35.96■■■■□ 3.35
PDCD2-211ENST00000544336 PASKQ96RG2 1323 aa35.96■■■■□ 3.35
PDCD2-211ENST00000544336 EIF6P56537 245 aaKnown RBP35.95■■■■□ 3.35
PDCD2-211ENST00000544336 LARGE2Q8N3Y3 721 aa35.95■■■■□ 3.35
PDCD2-211ENST00000544336 LAMB2P55268 1798 aa35.94■■■■□ 3.34
PDCD2-211ENST00000544336 ADAMTSL1Q8N6G6 1762 aa35.94■■■■□ 3.34
PDCD2-211ENST00000544336 RUNDC1Q96C34 613 aa35.94■■■■□ 3.34
PDCD2-211ENST00000544336 TRIM35Q9UPQ4 493 aa35.93■■■■□ 3.34
PDCD2-211ENST00000544336 GRIPAP1Q4V328 841 aa35.92■■■■□ 3.34
PDCD2-211ENST00000544336 CHL1O00533 1208 aa35.91■■■■□ 3.34
PDCD2-211ENST00000544336 HSP90AB3PQ58FF7 597 aa35.91■■■■□ 3.34
PDCD2-211ENST00000544336 SLC10A5Q5PT55 438 aa35.91■■■■□ 3.34
PDCD2-211ENST00000544336 PNMA8AQ86V59 439 aaPredicted RBP35.91■■■■□ 3.34
PDCD2-211ENST00000544336 ZNF428Q96B54 188 aa35.91■■■■□ 3.34
PDCD2-211ENST00000544336 ABCC4O15439 1325 aa35.9■■■■□ 3.34
PDCD2-211ENST00000544336 ITGBL1O95965 494 aaPredicted RBP35.9■■■■□ 3.34
PDCD2-211ENST00000544336 NLRP10Q86W26 655 aa35.9■■■■□ 3.34
PDCD2-211ENST00000544336 TMX4Q9H1E5 349 aaPredicted RBP35.9■■■■□ 3.34
PDCD2-211ENST00000544336 DDX21Q9NR30 783 aaKnown RBP eCLIP35.9■■■■□ 3.34
PDCD2-211ENST00000544336 HCLS1P14317 486 aaPredicted RBP35.89■■■■□ 3.34
PDCD2-211ENST00000544336 MAP1SQ66K74 1059 aaPredicted RBP35.89■■■■□ 3.34
PDCD2-211ENST00000544336 CHPF2Q9P2E5 772 aa35.89■■■■□ 3.34
PDCD2-211ENST00000544336 ADAMTS8Q9UP79 889 aa35.89■■■■□ 3.34
PDCD2-211ENST00000544336 LTBP1Q14766 1721 aa35.88■■■■□ 3.34
PDCD2-211ENST00000544336 PPIP5K2O43314 1243 aa35.87■■■■□ 3.33
PDCD2-211ENST00000544336 TCIRG1Q13488 830 aa35.87■■■■□ 3.33
PDCD2-211ENST00000544336 NIM1KQ8IY84 436 aa35.87■■■■□ 3.33
PDCD2-211ENST00000544336 TNS4Q8IZW8 715 aa35.87■■■■□ 3.33
PDCD2-211ENST00000544336 TRMT112Q9UI30 125 aaKnown RBP35.87■■■■□ 3.33
PDCD2-211ENST00000544336 ATP6V0A2Q9Y487 856 aa35.87■■■■□ 3.33
PDCD2-211ENST00000544336 CNTNAP1P78357 1384 aa35.87■■■■□ 3.33
PDCD2-211ENST00000544336 TMEM88BA6NKF7 163 aa35.86■■■■□ 3.33
PDCD2-211ENST00000544336 LMOD1P29536 600 aaPredicted RBP35.86■■■■□ 3.33
PDCD2-211ENST00000544336 AOC3Q16853 763 aa35.85■■■■□ 3.33
PDCD2-211ENST00000544336 HDGFL1Q5TGJ6 251 aa35.85■■■■□ 3.33
PDCD2-211ENST00000544336 CNTROBQ8N137 903 aa35.85■■■■□ 3.33
PDCD2-211ENST00000544336 TAF1P21675 1872 aa35.83■■■■□ 3.33
PDCD2-211ENST00000544336 CAPN15O75808 1086 aa35.82■■■■□ 3.32
PDCD2-211ENST00000544336 EPS15P42566 896 aa35.82■■■■□ 3.32
PDCD2-211ENST00000544336 SCNN1DP51172 638 aa35.82■■■■□ 3.32
PDCD2-211ENST00000544336 SH3TC1Q8TE82 1336 aa35.82■■■■□ 3.32
PDCD2-211ENST00000544336 DDX46Q7L014 1031 aaKnown RBP35.8■■■■□ 3.32
PDCD2-211ENST00000544336 DPP8Q6V1X1 898 aaPredicted RBP35.79■■■■□ 3.32
PDCD2-211ENST00000544336 DDX60Q8IY21 1712 aaKnown RBP35.78■■■■□ 3.32
PDCD2-211ENST00000544336 BBOX1O75936 387 aa35.78■■■■□ 3.32
PDCD2-211ENST00000544336 VEGFBP49765 207 aa35.78■■■■□ 3.32
PDCD2-211ENST00000544336 SUPT20HQ8NEM7 779 aa35.78■■■■□ 3.32
PDCD2-211ENST00000544336 SP8Q8IXZ3 490 aa35.77■■■■□ 3.32
PDCD2-211ENST00000544336 PLBD2Q8NHP8 589 aa35.77■■■■□ 3.32
PDCD2-211ENST00000544336 HOXB7P09629 217 aa35.76■■■■□ 3.32
PDCD2-211ENST00000544336 ANKRD13DQ6ZTN6 518 aa35.76■■■■□ 3.32
PDCD2-211ENST00000544336 MPNDQ8N594 471 aa35.76■■■■□ 3.32
PDCD2-211ENST00000544336 CFAP44Q96MT7 982 aa35.76■■■■□ 3.32
PDCD2-211ENST00000544336 PRKRIP1Q9H875 184 aaPredicted RBP35.76■■■■□ 3.32
PDCD2-211ENST00000544336 DBF4Q9UBU7 674 aaPredicted RBP35.76■■■■□ 3.32
PDCD2-211ENST00000544336 GRAPQ13588 217 aa35.75■■■■□ 3.31
PDCD2-211ENST00000544336 DUSP27Q5VZP5 1158 aa35.75■■■■□ 3.31
PDCD2-211ENST00000544336 GRAPLQ8TC17 118 aaPredicted RBP35.75■■■■□ 3.31
PDCD2-211ENST00000544336 RTFDC1Q9BY42 306 aaPredicted RBP35.75■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms