RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 ZSWIM6Q9HCJ5 1215 aa21.34■■□□□ 1.01
SCARB1-208ENST00000544327 JCADQ9P266 1359 aa21.33■■□□□ 1.01
SCARB1-208ENST00000544327 NUP188Q5SRE5 1749 aa21.33■■□□□ 1.01
SCARB1-208ENST00000544327 PCDH11XQ9BZA7 1347 aa21.33■■□□□ 1.01
SCARB1-208ENST00000544327 PCDH11YQ9BZA8 1340 aa21.33■■□□□ 1.01
SCARB1-208ENST00000544327 CASP7P55210 303 aa21.33■■□□□ 1.01
SCARB1-208ENST00000544327 BRINP3Q76B58 766 aa21.33■■□□□ 1.01
SCARB1-208ENST00000544327 RFX7Q2KHR2 1363 aa21.33■■□□□ 1
SCARB1-208ENST00000544327 MAP4K1Q92918 833 aa21.32■■□□□ 1
SCARB1-208ENST00000544327 TLR7Q9NYK1 1049 aaKnown RBP21.32■■□□□ 1
SCARB1-208ENST00000544327 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.32■■□□□ 1
SCARB1-208ENST00000544327 MED23Q9ULK4 1368 aa21.32■■□□□ 1
SCARB1-208ENST00000544327 ERVV-2B6SEH9 535 aa21.32■■□□□ 1
SCARB1-208ENST00000544327 NCLP19338 710 aaKnown RBP21.32■■□□□ 1
SCARB1-208ENST00000544327 NASPP49321 788 aaPredicted RBP21.32■■□□□ 1
SCARB1-208ENST00000544327 PTPN12Q05209 780 aaKnown RBP21.32■■□□□ 1
SCARB1-208ENST00000544327 NKX1-1Q15270 411 aaPredicted RBP21.32■■□□□ 1
SCARB1-208ENST00000544327 ZSCAN31Q96LW9 406 aaPredicted RBP21.32■■□□□ 1
SCARB1-208ENST00000544327 PPP1R9BQ96SB3 815 aa21.32■■□□□ 1
SCARB1-208ENST00000544327 KCPQ6ZWJ8 1503 aa21.31■■□□□ 1
SCARB1-208ENST00000544327 COL5A2P05997 1499 aaPredicted RBP21.31■■□□□ 1
SCARB1-208ENST00000544327 ABCA3Q99758 1704 aa21.31■■□□□ 1
SCARB1-208ENST00000544327 SOS2Q07890 1332 aaPredicted RBP21.31■■□□□ 1
SCARB1-208ENST00000544327 CASTP20810 708 aaKnown RBP21.31■■□□□ 1
SCARB1-208ENST00000544327 CCDC173Q0VFZ6 552 aa21.31■■□□□ 1
SCARB1-208ENST00000544327 NMIQ13287 307 aaPredicted RBP21.31■■□□□ 1
SCARB1-208ENST00000544327 PRPF40BQ6NWY9 871 aaKnown RBP21.31■■□□□ 1
SCARB1-208ENST00000544327 SIL1Q9H173 461 aa21.31■■□□□ 1
SCARB1-208ENST00000544327 TMEM87AQ8NBN3 555 aa21.3■■□□□ 1
SCARB1-208ENST00000544327 DNAJC5Q9H3Z4 198 aa21.3■■□□□ 1
SCARB1-208ENST00000544327 SH2B1Q9NRF2 756 aaPredicted RBP21.3■■□□□ 1
SCARB1-208ENST00000544327 SHANK3Q9BYB0 1731 aa21.3■■□□□ 1
SCARB1-208ENST00000544327 ATP5JP18859 108 aa21.29■■□□□ 1
SCARB1-208ENST00000544327 KLHDC4Q8TBB5 520 aa21.29■■□□□ 1
SCARB1-208ENST00000544327 ZCRB1Q8TBF4 217 aaKnown RBP21.29■■□□□ 1
SCARB1-208ENST00000544327 FAM227BQ96M60 508 aa21.29■■□□□ 1
SCARB1-208ENST00000544327 PDRG1Q9NUG6 133 aa21.29■■□□□ 1
SCARB1-208ENST00000544327 RBM8AQ9Y5S9 174 aaKnown RBP21.29■■□□□ 1
SCARB1-208ENST00000544327 CYP46A1Q9Y6A2 500 aa21.29■■□□□ 1
SCARB1-208ENST00000544327 ZKSCAN1P17029 563 aaPredicted RBP21.29■■□□□ 1
SCARB1-208ENST00000544327 CREB3L3Q68CJ9 461 aa21.29■■□□□ 1
SCARB1-208ENST00000544327 CHAMP1Q96JM3 812 aa21.29■■□□□ 1
SCARB1-208ENST00000544327 JAKMIP1Q96N16 626 aaKnown RBP21.29■■□□□ 1
SCARB1-208ENST00000544327 ADCK5Q3MIX3 580 aa21.28■■□□□ 1
SCARB1-208ENST00000544327 TNNI3KQ59H18 835 aa21.28■■□□□ 1
SCARB1-208ENST00000544327 FOXD4L5Q5VV16 416 aaPredicted RBP21.28■■□□□ 1
SCARB1-208ENST00000544327 UBE3BQ7Z3V4 1068 aa21.28■■□□□ 1
SCARB1-208ENST00000544327 FOXD4L4Q8WXT5 416 aaPredicted RBP21.28■■□□□ 1
SCARB1-208ENST00000544327 FSD1Q9BTV5 496 aa21.28■■□□□ 1
SCARB1-208ENST00000544327 BOLA2Q9H3K6 86 aa21.28■■□□□ 1
SCARB1-208ENST00000544327 TMEM63CQ9P1W3 806 aa21.28■■□□□ 1
SCARB1-208ENST00000544327 FPGT-TNNI3KV9GXZ4 949 aa21.28■■□□□ 1
SCARB1-208ENST00000544327 TJP1Q07157 1748 aa21.28■■□□□ 1
SCARB1-208ENST00000544327 TNS2Q63HR2 1409 aa21.28■■□□□ 1
SCARB1-208ENST00000544327 H7C1W4 665 aa21.27■■□□□ 1
SCARB1-208ENST00000544327 ALDH8A1Q9H2A2 487 aaPredicted RBP21.27■■□□□ 1
SCARB1-208ENST00000544327 PRDM11Q9NQV5 511 aa21.27■■□□□ 1
SCARB1-208ENST00000544327 A0A087WZG4 1122 aa21.27■□□□□ 0.99
SCARB1-208ENST00000544327 NBPF26B4DH59 902 aa21.27■□□□□ 0.99
SCARB1-208ENST00000544327 CLCN1P35523 988 aa21.27■□□□□ 0.99
SCARB1-208ENST00000544327 NBPF14Q5TI25 921 aa21.27■□□□□ 0.99
SCARB1-208ENST00000544327 NBPF10Q6P3W6 841 aaKnown RBP21.27■□□□□ 0.99
SCARB1-208ENST00000544327 LRSAM1Q6UWE0 723 aa21.27■□□□□ 0.99
SCARB1-208ENST00000544327 NBPF15Q8N660 670 aa21.27■□□□□ 0.99
SCARB1-208ENST00000544327 RBM27Q9P2N5 1060 aaKnown RBP21.27■□□□□ 0.99
SCARB1-208ENST00000544327 A0A0D9SFI3 127 aa21.26■□□□□ 0.99
SCARB1-208ENST00000544327 ZSCAN22P10073 491 aaPredicted RBP21.26■□□□□ 0.99
SCARB1-208ENST00000544327 PSMA5P28066 241 aa21.26■□□□□ 0.99
SCARB1-208ENST00000544327 PIP4K2AP48426 406 aaPredicted RBP21.26■□□□□ 0.99
SCARB1-208ENST00000544327 TSGA10IPQ3SY00 556 aa21.26■□□□□ 0.99
SCARB1-208ENST00000544327 CARD10Q9BWT7 1032 aa21.26■□□□□ 0.99
SCARB1-208ENST00000544327 DBNLQ9UJU6 430 aaKnown RBP21.26■□□□□ 0.99
SCARB1-208ENST00000544327 NSFL1CQ9UNZ2 370 aaKnown RBP21.26■□□□□ 0.99
SCARB1-208ENST00000544327 SLC27A2O14975 620 aa21.25■□□□□ 0.99
SCARB1-208ENST00000544327 SMC3Q9UQE7 1217 aa21.25■□□□□ 0.99
SCARB1-208ENST00000544327 TFCP2Q12800 502 aa21.25■□□□□ 0.99
SCARB1-208ENST00000544327 RNF20Q5VTR2 975 aa21.25■□□□□ 0.99
SCARB1-208ENST00000544327 TOM1L2Q6ZVM7 507 aa21.25■□□□□ 0.99
SCARB1-208ENST00000544327 TICAM2Q86XR7 235 aa21.25■□□□□ 0.99
SCARB1-208ENST00000544327 ANP32BQ92688 251 aaKnown RBP21.25■□□□□ 0.99
SCARB1-208ENST00000544327 HMG20BQ9P0W2 317 aa21.25■□□□□ 0.99
SCARB1-208ENST00000544327 ATP5J2-PTCD1G3V325 749 aa21.24■□□□□ 0.99
SCARB1-208ENST00000544327 STX6O43752 255 aa21.24■□□□□ 0.99
SCARB1-208ENST00000544327 PTCD1O75127 700 aaKnown RBP21.24■□□□□ 0.99
SCARB1-208ENST00000544327 CPA1P15085 419 aa21.24■□□□□ 0.99
SCARB1-208ENST00000544327 PRIM1P49642 420 aaKnown RBP21.24■□□□□ 0.99
SCARB1-208ENST00000544327 FOXO4P98177 505 aa21.24■□□□□ 0.99
SCARB1-208ENST00000544327 SYAP1Q96A49 352 aaPredicted RBP21.24■□□□□ 0.99
SCARB1-208ENST00000544327 STRCQ7RTU9 1775 aa21.24■□□□□ 0.99
SCARB1-208ENST00000544327 LARGE1O95461 756 aa21.23■□□□□ 0.99
SCARB1-208ENST00000544327 SYT1P21579 422 aa21.23■□□□□ 0.99
SCARB1-208ENST00000544327 TRIM44Q96DX7 344 aaPredicted RBP21.23■□□□□ 0.99
SCARB1-208ENST00000544327 RBSNQ9H1K0 784 aa21.23■□□□□ 0.99
SCARB1-208ENST00000544327 PDIA4P13667 645 aaKnown RBP21.22■□□□□ 0.99
SCARB1-208ENST00000544327 IL2RBP14784 551 aa21.22■□□□□ 0.99
SCARB1-208ENST00000544327 HSPA2P54652 639 aa21.22■□□□□ 0.99
SCARB1-208ENST00000544327 USPL1Q5W0Q7 1092 aa21.22■□□□□ 0.99
SCARB1-208ENST00000544327 ESPNB1AK53 854 aa21.22■□□□□ 0.99
SCARB1-208ENST00000544327 KCNJ4P48050 445 aa21.22■□□□□ 0.99
SCARB1-208ENST00000544327 JARID2Q92833 1246 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms