RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 TTLL6Q8N841 843 aa27.98■■■□□ 2.07
OTUB1-212ENST00000543988 ZNF622Q969S3 477 aaKnown RBP eCLIP27.98■■■□□ 2.074e-7■■□□□ 11.5
OTUB1-212ENST00000543988 ISCA1Q9BUE6 129 aa27.98■■■□□ 2.07
OTUB1-212ENST00000543988 ARFGEF2Q9Y6D5 1785 aa27.97■■■□□ 2.07
OTUB1-212ENST00000543988 ZNF428Q96B54 188 aa27.97■■■□□ 2.07
OTUB1-212ENST00000543988 DDX58O95786 925 aaKnown RBP27.96■■■□□ 2.07
OTUB1-212ENST00000543988 STYK1Q6J9G0 422 aa27.96■■■□□ 2.07
OTUB1-212ENST00000543988 RNF123Q5XPI4 1314 aa27.95■■■□□ 2.07
OTUB1-212ENST00000543988 MASTLQ96GX5 879 aa27.95■■■□□ 2.06
OTUB1-212ENST00000543988 ADCY9O60503 1353 aa27.95■■■□□ 2.06
OTUB1-212ENST00000543988 C3orf67Q6ZVT6 689 aa27.94■■■□□ 2.06
OTUB1-212ENST00000543988 TRMT112Q9UI30 125 aaKnown RBP27.94■■■□□ 2.06
OTUB1-212ENST00000543988 NPR1P16066 1061 aa27.93■■■□□ 2.06
OTUB1-212ENST00000543988 FLIIQ13045 1269 aa27.93■■■□□ 2.06
OTUB1-212ENST00000543988 CRY2Q49AN0 593 aa27.93■■■□□ 2.06
OTUB1-212ENST00000543988 ARHGAP27Q6ZUM4 889 aa27.93■■■□□ 2.06
OTUB1-212ENST00000543988 SYNE4Q8N205 404 aa27.93■■■□□ 2.06
OTUB1-212ENST00000543988 MYD88Q99836 296 aa27.93■■■□□ 2.06
OTUB1-212ENST00000543988 MAP3K2Q9Y2U5 619 aa27.93■■■□□ 2.06
OTUB1-212ENST00000543988 PI4KAP2A4QPH2 592 aa27.92■■■□□ 2.06
OTUB1-212ENST00000543988 TRIM28Q13263 835 aaKnown RBP27.92■■■□□ 2.06
OTUB1-212ENST00000543988 KSR2Q6VAB6 950 aa27.92■■■□□ 2.06
OTUB1-212ENST00000543988 PI4KAP1Q8N8J0 262 aa27.92■■■□□ 2.06
OTUB1-212ENST00000543988 ARFGEF1Q9Y6D6 1849 aa27.92■■■□□ 2.06
OTUB1-212ENST00000543988 PRPF40BQ6NWY9 871 aaKnown RBP27.91■■■□□ 2.06
OTUB1-212ENST00000543988 TRMT2AQ8IZ69 625 aaKnown RBP27.91■■■□□ 2.06
OTUB1-212ENST00000543988 CNKSR1Q969H4 720 aa27.91■■■□□ 2.06
OTUB1-212ENST00000543988 METTL22Q9BUU2 404 aaPredicted RBP27.91■■■□□ 2.06
OTUB1-212ENST00000543988 SH3TC1Q8TE82 1336 aa27.91■■■□□ 2.06
OTUB1-212ENST00000543988 HNRNPUQ00839 825 aaKnown RBP eCLIP27.9■■■□□ 2.06
OTUB1-212ENST00000543988 SLC10A5Q5PT55 438 aa27.9■■■□□ 2.06
OTUB1-212ENST00000543988 HCLS1P14317 486 aaPredicted RBP27.89■■■□□ 2.06
OTUB1-212ENST00000543988 FKBP5Q13451 457 aaPredicted RBP27.88■■■□□ 2.05
OTUB1-212ENST00000543988 ZNF219Q9P2Y4 722 aaPredicted RBP27.88■■■□□ 2.05
OTUB1-212ENST00000543988 CHD4Q14839 1912 aa27.87■■■□□ 2.05
OTUB1-212ENST00000543988 FAM89AQ96GI7 184 aa27.87■■■□□ 2.05
OTUB1-212ENST00000543988 C21orf2O43822 256 aa27.86■■■□□ 2.05
OTUB1-212ENST00000543988 RPGRQ92834 1020 aaKnown RBP27.86■■■□□ 2.05
OTUB1-212ENST00000543988 IGKV5-2P06315 115 aa27.85■■■□□ 2.05
OTUB1-212ENST00000543988 HOXA10P31260 410 aaPredicted RBP27.85■■■□□ 2.05
OTUB1-212ENST00000543988 CCDC191Q8NCU4 936 aa27.85■■■□□ 2.05
OTUB1-212ENST00000543988 NLRP3Q96P20 1036 aa27.85■■■□□ 2.05
OTUB1-212ENST00000543988 CWC25Q9NXE8 425 aaPredicted RBP27.85■■■□□ 2.05
OTUB1-212ENST00000543988 RTL5Q5HYW3 569 aaPredicted RBP27.84■■■□□ 2.05
OTUB1-212ENST00000543988 SLX4Q8IY92 1834 aa27.83■■■□□ 2.05
OTUB1-212ENST00000543988 RASSF7Q02833 373 aa27.83■■■□□ 2.05
OTUB1-212ENST00000543988 NEXNQ0ZGT2 675 aa27.83■■■□□ 2.05
OTUB1-212ENST00000543988 NFKBIEO00221 500 aa27.82■■■□□ 2.04
OTUB1-212ENST00000543988 CWF19L2Q2TBE0 894 aaKnown RBP27.82■■■□□ 2.04
OTUB1-212ENST00000543988 ZBTB38Q8NAP3 1195 aaPredicted RBP27.82■■■□□ 2.04
OTUB1-212ENST00000543988 C7orf43Q8WVR3 580 aa27.82■■■□□ 2.04
OTUB1-212ENST00000543988 DNAAF4Q8WXU2 420 aa27.82■■■□□ 2.04
OTUB1-212ENST00000543988 ALDH1B1P30837 517 aa27.81■■■□□ 2.04
OTUB1-212ENST00000543988 SSH1Q8WYL5 1049 aa27.81■■■□□ 2.04
OTUB1-212ENST00000543988 NEURL1BA8MQ27 555 aa27.8■■■□□ 2.04
OTUB1-212ENST00000543988 F6X3S4 739 aa27.8■■■□□ 2.04
OTUB1-212ENST00000543988 IRS4O14654 1257 aaPredicted RBP27.8■■■□□ 2.04
OTUB1-212ENST00000543988 PCCAP05165 728 aaPredicted RBP27.8■■■□□ 2.04
OTUB1-212ENST00000543988 MRPL50Q8N5N7 158 aaKnown RBP27.8■■■□□ 2.04
OTUB1-212ENST00000543988 RBM17Q96I25 401 aaKnown RBP27.8■■■□□ 2.04
OTUB1-212ENST00000543988 CRAMP1Q96RY5 1269 aa27.8■■■□□ 2.04
OTUB1-212ENST00000543988 OLFM4Q6UX06 510 aa27.79■■■□□ 2.04
OTUB1-212ENST00000543988 JARID2Q92833 1246 aaPredicted RBP27.79■■■□□ 2.04
OTUB1-212ENST00000543988 PRELPP51888 382 aa27.78■■■□□ 2.04
OTUB1-212ENST00000543988 SOGA3Q5TF21 947 aa27.78■■■□□ 2.04
OTUB1-212ENST00000543988 C9orf131Q5VYM1 1079 aa27.78■■■□□ 2.04
OTUB1-212ENST00000543988 ZNF784Q8NCA9 323 aaPredicted RBP27.78■■■□□ 2.04
OTUB1-212ENST00000543988 BCL2L13Q9BXK5 485 aa27.78■■■□□ 2.04
OTUB1-212ENST00000543988 DDX60Q8IY21 1712 aaKnown RBP27.78■■■□□ 2.04
OTUB1-212ENST00000543988 ABCC4O15439 1325 aa27.77■■■□□ 2.04
OTUB1-212ENST00000543988 SLC51AQ86UW1 340 aa27.77■■■□□ 2.04
OTUB1-212ENST00000543988 CACNA1SQ13698 1873 aa27.76■■■□□ 2.04
OTUB1-212ENST00000543988 CT47B1P0C2W7 299 aaPredicted RBP27.76■■■□□ 2.03
OTUB1-212ENST00000543988 CCDC93Q567U6 631 aa27.76■■■□□ 2.03
OTUB1-212ENST00000543988 LINS1Q8NG48 757 aa27.76■■■□□ 2.03
OTUB1-212ENST00000543988 RNF181Q9P0P0 153 aa27.76■■■□□ 2.03
OTUB1-212ENST00000543988 CACNA1FO60840 1977 aa27.76■■■□□ 2.03
OTUB1-212ENST00000543988 LAMB2P55268 1798 aa27.76■■■□□ 2.03
OTUB1-212ENST00000543988 ZBED9Q6R2W3 1325 aa27.74■■■□□ 2.03
OTUB1-212ENST00000543988 PPEF1O14829 653 aaPredicted RBP27.74■■■□□ 2.03
OTUB1-212ENST00000543988 GCKRQ14397 625 aa27.74■■■□□ 2.03
OTUB1-212ENST00000543988 SF3B3Q15393 1217 aaKnown RBP27.74■■■□□ 2.03
OTUB1-212ENST00000543988 ALDH1L2Q3SY69 923 aa27.74■■■□□ 2.03
OTUB1-212ENST00000543988 TAOK3Q9H2K8 898 aa27.74■■■□□ 2.03
OTUB1-212ENST00000543988 SMC4Q9NTJ3 1288 aa27.74■■■□□ 2.03
OTUB1-212ENST00000543988 CDHR2Q9BYE9 1310 aa27.73■■■□□ 2.03
OTUB1-212ENST00000543988 LTBP3Q9NS15 1303 aa27.73■■■□□ 2.03
OTUB1-212ENST00000543988 LMNB1P20700 586 aa27.73■■■□□ 2.03
OTUB1-212ENST00000543988 BEND3Q5T5X7 828 aa27.73■■■□□ 2.03
OTUB1-212ENST00000543988 DDX46Q7L014 1031 aaKnown RBP27.73■■■□□ 2.03
OTUB1-212ENST00000543988 SNED1Q8TER0 1413 aa27.73■■■□□ 2.03
OTUB1-212ENST00000543988 UBE3BQ7Z3V4 1068 aa27.72■■■□□ 2.03
OTUB1-212ENST00000543988 HSP90B1P14625 803 aaKnown RBP27.71■■■□□ 2.03
OTUB1-212ENST00000543988 GRAPQ13588 217 aa27.7■■■□□ 2.02
OTUB1-212ENST00000543988 GRAPLQ8TC17 118 aaPredicted RBP27.7■■■□□ 2.02
OTUB1-212ENST00000543988 FER1L6Q2WGJ9 1857 aa27.7■■■□□ 2.02
OTUB1-212ENST00000543988 PTPRCP08575 1304 aa27.69■■■□□ 2.02
OTUB1-212ENST00000543988 H7C1W4 665 aa27.69■■■□□ 2.02
OTUB1-212ENST00000543988 PDE8AO60658 829 aa27.69■■■□□ 2.02
OTUB1-212ENST00000543988 SLC4A10Q6U841 1118 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms