RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 GTF2E1P29083 439 aaPredicted RBP16.44■□□□□ 0.22
ITM2C-209ENST00000543957 NOGQ13253 232 aa16.44■□□□□ 0.22
ITM2C-209ENST00000543957 GLIS2Q9BZE0 524 aaPredicted RBP16.44■□□□□ 0.22
ITM2C-209ENST00000543957 GPRC5DQ9NZD1 345 aa16.44■□□□□ 0.22
ITM2C-209ENST00000543957 USP16Q9Y5T5 823 aa16.44■□□□□ 0.22
ITM2C-209ENST00000543957 GNAT3A8MTJ3 354 aa16.43■□□□□ 0.22
ITM2C-209ENST00000543957 KCNQ3O43525 872 aa16.43■□□□□ 0.22
ITM2C-209ENST00000543957 GRIPAP1Q4V328 841 aa16.43■□□□□ 0.22
ITM2C-209ENST00000543957 NIM1KQ8IY84 436 aa16.43■□□□□ 0.22
ITM2C-209ENST00000543957 ZIC5Q96T25 663 aa16.43■□□□□ 0.22
ITM2C-209ENST00000543957 ZNF408Q9H9D4 720 aa16.43■□□□□ 0.22
ITM2C-209ENST00000543957 RGL2O15211 777 aa16.42■□□□□ 0.22
ITM2C-209ENST00000543957 CRY2Q49AN0 593 aa16.42■□□□□ 0.22
ITM2C-209ENST00000543957 PGAP2Q9UHJ9 254 aa16.41■□□□□ 0.22
ITM2C-209ENST00000543957 KNSTRNQ9Y448 316 aa16.41■□□□□ 0.22
ITM2C-209ENST00000543957 BTBD11A6QL63 1104 aa16.4■□□□□ 0.22
ITM2C-209ENST00000543957 DIAPH1O60610 1272 aaKnown RBP16.4■□□□□ 0.22
ITM2C-209ENST00000543957 GAS2L2Q8NHY3 880 aa16.4■□□□□ 0.22
ITM2C-209ENST00000543957 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
ITM2C-209ENST00000543957 PPIP5K2O43314 1243 aa16.39■□□□□ 0.21
ITM2C-209ENST00000543957 CDC37L1Q7L3B6 337 aa16.39■□□□□ 0.21
ITM2C-209ENST00000543957 ZC3H15Q8WU90 426 aaKnown RBP16.39■□□□□ 0.21
ITM2C-209ENST00000543957 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.21
ITM2C-209ENST00000543957 HOXA10P31260 410 aaPredicted RBP16.38■□□□□ 0.21
ITM2C-209ENST00000543957 GMPSP49915 693 aaPredicted RBP16.38■□□□□ 0.21
ITM2C-209ENST00000543957 HUNKP57058 714 aa16.38■□□□□ 0.21
ITM2C-209ENST00000543957 CXCL9Q07325 125 aa16.38■□□□□ 0.21
ITM2C-209ENST00000543957 HLFQ16534 295 aa16.38■□□□□ 0.21
ITM2C-209ENST00000543957 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
ITM2C-209ENST00000543957 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
ITM2C-209ENST00000543957 TIMELESSQ9UNS1 1208 aa16.38■□□□□ 0.21
ITM2C-209ENST00000543957 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
ITM2C-209ENST00000543957 SIPA1L3O60292 1781 aaPredicted RBP16.37■□□□□ 0.21
ITM2C-209ENST00000543957 NBPF26B4DH59 902 aa16.37■□□□□ 0.21
ITM2C-209ENST00000543957 TCERG1O14776 1098 aaKnown RBP16.37■□□□□ 0.21
ITM2C-209ENST00000543957 SNRPA1P09661 255 aaKnown RBP16.37■□□□□ 0.21
ITM2C-209ENST00000543957 AOC3Q16853 763 aa16.37■□□□□ 0.21
ITM2C-209ENST00000543957 NBPF10Q6P3W6 841 aaKnown RBP16.37■□□□□ 0.21
ITM2C-209ENST00000543957 NBPF15Q8N660 670 aa16.37■□□□□ 0.21
ITM2C-209ENST00000543957 NYXQ9GZU5 481 aa16.37■□□□□ 0.21
ITM2C-209ENST00000543957 CEMIPQ8WUJ3 1361 aa16.37■□□□□ 0.21
ITM2C-209ENST00000543957 ABCC12Q96J65 1359 aa16.37■□□□□ 0.21
ITM2C-209ENST00000543957 PPEF1O14829 653 aaPredicted RBP16.36■□□□□ 0.21
ITM2C-209ENST00000543957 HIRAP54198 1017 aaPredicted RBP16.36■□□□□ 0.21
ITM2C-209ENST00000543957 SLC51AQ86UW1 340 aa16.36■□□□□ 0.21
ITM2C-209ENST00000543957 ZNRF3Q9ULT6 936 aa16.36■□□□□ 0.21
ITM2C-209ENST00000543957 TRPA1O75762 1119 aa16.35■□□□□ 0.21
ITM2C-209ENST00000543957 AMER1Q5JTC6 1135 aaPredicted RBP16.35■□□□□ 0.21
ITM2C-209ENST00000543957 RBM17Q96I25 401 aaKnown RBP16.35■□□□□ 0.21
ITM2C-209ENST00000543957 CRAMP1Q96RY5 1269 aa16.35■□□□□ 0.21
ITM2C-209ENST00000543957 VPS33BQ9H267 617 aa16.35■□□□□ 0.21
ITM2C-209ENST00000543957 RNF186Q9NXI6 227 aa16.35■□□□□ 0.21
ITM2C-209ENST00000543957 KIF7Q2M1P5 1343 aa16.35■□□□□ 0.21
ITM2C-209ENST00000543957 FAM155AB1AL88 458 aaPredicted RBP16.34■□□□□ 0.21
ITM2C-209ENST00000543957 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
ITM2C-209ENST00000543957 RGMBQ6NW40 437 aa16.34■□□□□ 0.21
ITM2C-209ENST00000543957 CTU1Q7Z7A3 348 aaKnown RBP16.34■□□□□ 0.21
ITM2C-209ENST00000543957 USP48Q86UV5 1035 aa16.34■□□□□ 0.21
ITM2C-209ENST00000543957 BCL2L13Q9BXK5 485 aa16.34■□□□□ 0.21
ITM2C-209ENST00000543957 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
ITM2C-209ENST00000543957 CDHR2Q9BYE9 1310 aa16.34■□□□□ 0.21
ITM2C-209ENST00000543957 CCER1Q8TC90 406 aaPredicted RBP16.33■□□□□ 0.2
ITM2C-209ENST00000543957 TRPM4Q8TD43 1214 aa16.33■□□□□ 0.2
ITM2C-209ENST00000543957 CCDC102AQ96A19 550 aa16.33■□□□□ 0.2
ITM2C-209ENST00000543957 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
ITM2C-209ENST00000543957 GCC1Q96CN9 775 aa16.32■□□□□ 0.2
ITM2C-209ENST00000543957 RIC1Q4ADV7 1423 aa16.31■□□□□ 0.2
ITM2C-209ENST00000543957 DLK2Q6UY11 383 aa16.31■□□□□ 0.2
ITM2C-209ENST00000543957 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
ITM2C-209ENST00000543957 CNOT7Q9UIV1 285 aaKnown RBP16.31■□□□□ 0.2
ITM2C-209ENST00000543957 HPS5Q9UPZ3 1129 aa16.31■□□□□ 0.2
ITM2C-209ENST00000543957 H7C1D1 291 aa16.3■□□□□ 0.2
ITM2C-209ENST00000543957 RAD17O75943 681 aa16.3■□□□□ 0.2
ITM2C-209ENST00000543957 ZNF157P51786 506 aaPredicted RBP16.3■□□□□ 0.2
ITM2C-209ENST00000543957 EIF4G2P78344 907 aaKnown RBP eCLIP16.3■□□□□ 0.2
ITM2C-209ENST00000543957 TNIP1Q15025 636 aa16.3■□□□□ 0.2
ITM2C-209ENST00000543957 C2orf69Q8N8R5 385 aa16.3■□□□□ 0.2
ITM2C-209ENST00000543957 GBA2Q9HCG7 927 aaPredicted RBP16.3■□□□□ 0.2
ITM2C-209ENST00000543957 ATP6V0A2Q9Y487 856 aa16.3■□□□□ 0.2
ITM2C-209ENST00000543957 SHTN1A0MZ66 631 aa16.29■□□□□ 0.2
ITM2C-209ENST00000543957 ERVV-1B6SEH8 477 aa16.29■□□□□ 0.2
ITM2C-209ENST00000543957 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
ITM2C-209ENST00000543957 NGEFQ8N5V2 710 aa16.29■□□□□ 0.2
ITM2C-209ENST00000543957 RTFDC1Q9BY42 306 aaPredicted RBP16.29■□□□□ 0.2
ITM2C-209ENST00000543957 GPTP24298 496 aa16.28■□□□□ 0.2
ITM2C-209ENST00000543957 SUSD4Q5VX71 490 aa16.28■□□□□ 0.2
ITM2C-209ENST00000543957 C3orf67Q6ZVT6 689 aa16.28■□□□□ 0.2
ITM2C-209ENST00000543957 KRT26Q7Z3Y9 468 aa16.28■□□□□ 0.2
ITM2C-209ENST00000543957 MICALL2Q8IY33 904 aa16.28■□□□□ 0.2
ITM2C-209ENST00000543957 PHACTR3Q96KR7 559 aa16.28■□□□□ 0.2
ITM2C-209ENST00000543957 CSRNP1Q96S65 589 aa16.28■□□□□ 0.2
ITM2C-209ENST00000543957 IBTKQ9P2D0 1353 aaPredicted RBP16.27■□□□□ 0.2
ITM2C-209ENST00000543957 MAP3K15Q6ZN16 1313 aa16.27■□□□□ 0.2
ITM2C-209ENST00000543957 UBN2Q6ZU65 1347 aa16.27■□□□□ 0.2
ITM2C-209ENST00000543957 KIAA2012Q0VF49 1180 aa16.27■□□□□ 0.2
ITM2C-209ENST00000543957 PKN2Q16513 984 aaKnown RBP16.27■□□□□ 0.2
ITM2C-209ENST00000543957 DPP8Q6V1X1 898 aaPredicted RBP16.27■□□□□ 0.2
ITM2C-209ENST00000543957 SAMD7Q7Z3H4 446 aa16.26■□□□□ 0.19
ITM2C-209ENST00000543957 RTF1Q92541 710 aaKnown RBP16.26■□□□□ 0.19
ITM2C-209ENST00000543957 NLRP3Q96P20 1036 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms