RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 TAOK3Q9H2K8 898 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 ANXA1P04083 346 aa13.25□□□□□ -0.29
NPIPB4-217ENST00000543449 ERFEQ4G0M1 354 aa13.25□□□□□ -0.29
NPIPB4-217ENST00000543449 SLC10A5Q5PT55 438 aa13.25□□□□□ -0.29
NPIPB4-217ENST00000543449 STK31Q9BXU1 1019 aa13.25□□□□□ -0.29
NPIPB4-217ENST00000543449 SH3TC1Q8TE82 1336 aa13.24□□□□□ -0.29
NPIPB4-217ENST00000543449 HOXA10P31260 410 aaPredicted RBP13.24□□□□□ -0.29
NPIPB4-217ENST00000543449 TRIM28Q13263 835 aaKnown RBP13.24□□□□□ -0.29
NPIPB4-217ENST00000543449 DPY19L2Q6NUT2 758 aa13.24□□□□□ -0.29
NPIPB4-217ENST00000543449 NUTM1Q86Y26 1132 aa13.24□□□□□ -0.29
NPIPB4-217ENST00000543449 CRAMP1Q96RY5 1269 aa13.24□□□□□ -0.29
NPIPB4-217ENST00000543449 RIC3Q7Z5B4 369 aa13.23□□□□□ -0.29
NPIPB4-217ENST00000543449 NLRP10Q86W26 655 aa13.23□□□□□ -0.29
NPIPB4-217ENST00000543449 FAM9BQ8IZU0 186 aa13.23□□□□□ -0.29
NPIPB4-217ENST00000543449 ZNF526Q8TF50 670 aaPredicted RBP13.23□□□□□ -0.29
NPIPB4-217ENST00000543449 TRMT112Q9UI30 125 aaKnown RBP13.23□□□□□ -0.29
NPIPB4-217ENST00000543449 ARFGEF2Q9Y6D5 1785 aa13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 COL11A2P13942 1736 aaPredicted RBP13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 ABCC12Q96J65 1359 aa13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 NFKBIEO00221 500 aa13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 ELL2O00472 640 aaPredicted RBP13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 RASSF7Q02833 373 aa13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 TWISTNBQ3B726 338 aaPredicted RBP13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 C16orf71Q8IYS4 520 aaPredicted RBP13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 C8orf58Q8NAV2 365 aa13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 C7orf43Q8WVR3 580 aa13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 MYH16Q9H6N6 1097 aa13.22□□□□□ -0.29
NPIPB4-217ENST00000543449 GLTPD2A6NH11 291 aa13.21□□□□□ -0.29
NPIPB4-217ENST00000543449 TMC4Q7Z404 712 aa13.21□□□□□ -0.29
NPIPB4-217ENST00000543449 ISCA1Q9BUE6 129 aa13.21□□□□□ -0.29
NPIPB4-217ENST00000543449 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
NPIPB4-217ENST00000543449 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
NPIPB4-217ENST00000543449 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
NPIPB4-217ENST00000543449 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
NPIPB4-217ENST00000543449 PSMD1Q99460 953 aa13.2□□□□□ -0.3
NPIPB4-217ENST00000543449 ANKRD36CQ5JPF3 1778 aa13.2□□□□□ -0.3
NPIPB4-217ENST00000543449 CCER2I3L3R5 266 aa13.19□□□□□ -0.3
NPIPB4-217ENST00000543449 KIF3CO14782 793 aa13.19□□□□□ -0.3
NPIPB4-217ENST00000543449 BBOX1O75936 387 aa13.19□□□□□ -0.3
NPIPB4-217ENST00000543449 TOMM70O94826 608 aa13.19□□□□□ -0.3
NPIPB4-217ENST00000543449 CCDC191Q8NCU4 936 aa13.19□□□□□ -0.3
NPIPB4-217ENST00000543449 VPS33BQ9H267 617 aa13.19□□□□□ -0.3
NPIPB4-217ENST00000543449 SLX4Q8IY92 1834 aa13.18□□□□□ -0.3
NPIPB4-217ENST00000543449 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
NPIPB4-217ENST00000543449 PPEF1O14829 653 aaPredicted RBP13.18□□□□□ -0.3
NPIPB4-217ENST00000543449 KSR2Q6VAB6 950 aa13.18□□□□□ -0.3
NPIPB4-217ENST00000543449 TSPYL6Q8N831 410 aa13.18□□□□□ -0.3
NPIPB4-217ENST00000543449 ZBTB38Q8NAP3 1195 aaPredicted RBP13.18□□□□□ -0.3
NPIPB4-217ENST00000543449 SUPT20HQ8NEM7 779 aa13.18□□□□□ -0.3
NPIPB4-217ENST00000543449 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
NPIPB4-217ENST00000543449 SBF1O95248 1867 aa13.18□□□□□ -0.3
NPIPB4-217ENST00000543449 FER1L6Q2WGJ9 1857 aa13.18□□□□□ -0.3
NPIPB4-217ENST00000543449 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
NPIPB4-217ENST00000543449 RBM46Q8TBY0 533 aaKnown RBP13.17□□□□□ -0.3
NPIPB4-217ENST00000543449 JDP2Q8WYK2 163 aa13.17□□□□□ -0.3
NPIPB4-217ENST00000543449 METTL22Q9BUU2 404 aaPredicted RBP13.17□□□□□ -0.3
NPIPB4-217ENST00000543449 SALL2Q9Y467 1007 aaPredicted RBP13.17□□□□□ -0.3
NPIPB4-217ENST00000543449 TNRC6CQ9HCJ0 1690 aaKnown RBP13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 ATP5J2-PTCD1G3V325 749 aa13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 FSTL1Q12841 308 aa13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 GRAPQ13588 217 aa13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 SF3B3Q15393 1217 aaKnown RBP13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 SYNE4Q8N205 404 aa13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 GRAPLQ8TC17 118 aaPredicted RBP13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 MYD88Q99836 296 aa13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 NMRK2Q9NPI5 230 aa13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 CWC25Q9NXE8 425 aaPredicted RBP13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 ATP6V0A2Q9Y487 856 aa13.16□□□□□ -0.3
NPIPB4-217ENST00000543449 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
NPIPB4-217ENST00000543449 IQCA1LA6NCM1 817 aa13.15□□□□□ -0.3
NPIPB4-217ENST00000543449 IRS4O14654 1257 aaPredicted RBP13.15□□□□□ -0.3
NPIPB4-217ENST00000543449 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
NPIPB4-217ENST00000543449 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
NPIPB4-217ENST00000543449 IARSP41252 1262 aaKnown RBP13.15□□□□□ -0.3
NPIPB4-217ENST00000543449 SP8Q8IXZ3 490 aa13.15□□□□□ -0.3
NPIPB4-217ENST00000543449 ABCC4O15439 1325 aa13.14□□□□□ -0.31
NPIPB4-217ENST00000543449 VAMP4O75379 141 aa13.14□□□□□ -0.31
NPIPB4-217ENST00000543449 PRELPP51888 382 aa13.14□□□□□ -0.31
NPIPB4-217ENST00000543449 EXOSC9Q06265 439 aaKnown RBP13.14□□□□□ -0.31
NPIPB4-217ENST00000543449 FAM89AQ96GI7 184 aa13.14□□□□□ -0.31
NPIPB4-217ENST00000543449 RRAGCQ9HB90 399 aa13.14□□□□□ -0.31
NPIPB4-217ENST00000543449 MAP3K2Q9Y2U5 619 aa13.14□□□□□ -0.31
NPIPB4-217ENST00000543449 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 UTRNP46939 3433 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 CACNA1SQ13698 1873 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 PI4KAP2A4QPH2 592 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 E9PSI1 815 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 PDE8AO60658 829 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 HSPA6P17066 643 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 EIF6P56537 245 aaKnown RBP13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 FLIIQ13045 1269 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 PI4KAP1Q8N8J0 262 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 SMC1BQ8NDV3 1235 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 ZNF428Q96B54 188 aa13.13□□□□□ -0.31
NPIPB4-217ENST00000543449 ZNF277Q9NRM2 450 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms