RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 OTUD7AQ8TE49 926 aaPredicted RBP11.51□□□□□ -0.57
GNE-206ENST00000543356 AOX1Q06278 1338 aa11.51□□□□□ -0.57
GNE-206ENST00000543356 GSPT1P15170 499 aaKnown RBP11.51□□□□□ -0.57
GNE-206ENST00000543356 CRKLP46109 303 aaKnown RBP11.51□□□□□ -0.57
GNE-206ENST00000543356 EIF5P55010 431 aaKnown RBP11.51□□□□□ -0.57
GNE-206ENST00000543356 EPHA10Q5JZY3 1008 aa11.51□□□□□ -0.57
GNE-206ENST00000543356 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
GNE-206ENST00000543356 STAP2Q9UGK3 403 aa11.5□□□□□ -0.57
GNE-206ENST00000543356 MYH14Q7Z406 1995 aaKnown RBP11.5□□□□□ -0.57
GNE-206ENST00000543356 PDE1AP54750 535 aa11.5□□□□□ -0.57
GNE-206ENST00000543356 SEPT12Q8IYM1 358 aa11.5□□□□□ -0.57
GNE-206ENST00000543356 SEC24BO95487 1268 aa11.49□□□□□ -0.57
GNE-206ENST00000543356 MX1P20591 662 aa11.49□□□□□ -0.57
GNE-206ENST00000543356 DZIP3Q86Y13 1208 aaKnown RBP11.49□□□□□ -0.57
GNE-206ENST00000543356 QTRT2Q9H974 415 aaKnown RBP11.49□□□□□ -0.57
GNE-206ENST00000543356 SCN7AQ01118 1682 aa11.49□□□□□ -0.57
GNE-206ENST00000543356 BRWD3Q6RI45 1802 aa11.49□□□□□ -0.57
GNE-206ENST00000543356 CNTNAP4Q9C0A0 1308 aa11.49□□□□□ -0.57
GNE-206ENST00000543356 FOXO4P98177 505 aa11.49□□□□□ -0.57
GNE-206ENST00000543356 TAF1LQ8IZX4 1826 aa11.48□□□□□ -0.57
GNE-206ENST00000543356 PCCAP05165 728 aaPredicted RBP11.48□□□□□ -0.57
GNE-206ENST00000543356 RFX5P48382 616 aaPredicted RBP11.48□□□□□ -0.57
GNE-206ENST00000543356 NPM2Q86SE8 214 aaKnown RBP11.48□□□□□ -0.57
GNE-206ENST00000543356 UPF2Q9HAU5 1272 aaKnown RBP11.48□□□□□ -0.57
GNE-206ENST00000543356 COPRSQ9NQ92 184 aa11.48□□□□□ -0.57
GNE-206ENST00000543356 CDHR2Q9BYE9 1310 aa11.48□□□□□ -0.57
GNE-206ENST00000543356 USP42Q9H9J4 1324 aaKnown RBP11.48□□□□□ -0.57
GNE-206ENST00000543356 CDC45O75419 566 aa11.48□□□□□ -0.57
GNE-206ENST00000543356 OS9Q13438 667 aaPredicted RBP11.48□□□□□ -0.57
GNE-206ENST00000543356 HLFQ16534 295 aa11.48□□□□□ -0.57
GNE-206ENST00000543356 JARID2Q92833 1246 aaPredicted RBP11.48□□□□□ -0.57
GNE-206ENST00000543356 PA2G4Q9UQ80 394 aaKnown RBP11.48□□□□□ -0.57
GNE-206ENST00000543356 ZBTB38Q8NAP3 1195 aaPredicted RBP11.47□□□□□ -0.57
GNE-206ENST00000543356 PLA2G12BQ9BX93 195 aa11.47□□□□□ -0.57
GNE-206ENST00000543356 IL1RAPL2Q9NP60 686 aa11.47□□□□□ -0.57
GNE-206ENST00000543356 LAMB2P55268 1798 aa11.47□□□□□ -0.57
GNE-206ENST00000543356 G3BP1Q13283 466 aaKnown RBP eCLIP11.47□□□□□ -0.57
GNE-206ENST00000543356 NLRP10Q86W26 655 aa11.47□□□□□ -0.57
GNE-206ENST00000543356 LINC00116Q8NCU8 138 aa11.47□□□□□ -0.57
GNE-206ENST00000543356 PTF1AQ7RTS3 328 aa11.46□□□□□ -0.57
GNE-206ENST00000543356 MYH3P11055 1940 aa11.46□□□□□ -0.58
GNE-206ENST00000543356 RGL2O15211 777 aa11.46□□□□□ -0.58
GNE-206ENST00000543356 SDSP20132 328 aa11.46□□□□□ -0.58
GNE-206ENST00000543356 PTPN12Q05209 780 aaKnown RBP11.46□□□□□ -0.58
GNE-206ENST00000543356 RC3H1Q5TC82 1133 aaKnown RBP11.46□□□□□ -0.58
GNE-206ENST00000543356 LMBR1LQ6UX01 489 aa11.46□□□□□ -0.58
GNE-206ENST00000543356 TBC1D9Q6ZT07 1266 aa11.46□□□□□ -0.58
GNE-206ENST00000543356 ZNF34Q8IZ26 560 aa11.46□□□□□ -0.58
GNE-206ENST00000543356 CLASRPQ8N2M8 674 aaKnown RBP11.46□□□□□ -0.58
GNE-206ENST00000543356 IPO9Q96P70 1041 aaKnown RBP11.46□□□□□ -0.58
GNE-206ENST00000543356 TTC41PQ6P2S7 1318 aa11.45□□□□□ -0.58
GNE-206ENST00000543356 SASH1O94885 1247 aa11.45□□□□□ -0.58
GNE-206ENST00000543356 CAMTA2O94983 1202 aa11.45□□□□□ -0.58
GNE-206ENST00000543356 ZNF772Q68DY9 489 aaPredicted RBP11.45□□□□□ -0.58
GNE-206ENST00000543356 DDRGK1Q96HY6 314 aa11.45□□□□□ -0.58
GNE-206ENST00000543356 TBC1D32Q96NH3 1257 aa11.45□□□□□ -0.58
GNE-206ENST00000543356 TBC1D2BQ9UPU7 963 aa11.45□□□□□ -0.58
GNE-206ENST00000543356 C4BP0C0L5 1744 aa11.45□□□□□ -0.58
GNE-206ENST00000543356 FAM182BQ5T319 152 aa11.45□□□□□ -0.58
GNE-206ENST00000543356 BCL11BQ9C0K0 894 aaPredicted RBP11.45□□□□□ -0.58
GNE-206ENST00000543356 KCNA4P22459 653 aa11.44□□□□□ -0.58
GNE-206ENST00000543356 NUTM1Q86Y26 1132 aa11.44□□□□□ -0.58
GNE-206ENST00000543356 UBN2Q6ZU65 1347 aa11.44□□□□□ -0.58
GNE-206ENST00000543356 GPTP24298 496 aa11.44□□□□□ -0.58
GNE-206ENST00000543356 PI4K2BQ8TCG2 481 aa11.44□□□□□ -0.58
GNE-206ENST00000543356 AK9Q5TCS8 1911 aa11.44□□□□□ -0.58
GNE-206ENST00000543356 DDX60Q8IY21 1712 aaKnown RBP11.43□□□□□ -0.58
GNE-206ENST00000543356 MFAP1P55081 439 aaKnown RBP11.43□□□□□ -0.58
GNE-206ENST00000543356 CASC1Q6TDU7 716 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 KLHDC4Q8TBB5 520 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 GPATCH3Q96I76 525 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 CCNL1Q9UK58 526 aaPredicted RBP11.43□□□□□ -0.58
GNE-206ENST00000543356 LRP5O75197 1615 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 CSF1RP07333 972 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 RBM6P78332 1123 aaKnown RBP11.43□□□□□ -0.58
GNE-206ENST00000543356 PARP10Q53GL7 1025 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 RTL5Q5HYW3 569 aaPredicted RBP11.43□□□□□ -0.58
GNE-206ENST00000543356 TSHZ3Q63HK5 1081 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 FAM196AQ6ZSG2 479 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 KRT27Q7Z3Y8 459 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 FAM89AQ96GI7 184 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 AK7Q96M32 723 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 SIL1Q9H173 461 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 ZNF652Q9Y2D9 606 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 C4AP0C0L4 1744 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 COL24A1Q17RW2 1714 aa11.43□□□□□ -0.58
GNE-206ENST00000543356 CIAO1O76071 339 aa11.42□□□□□ -0.58
GNE-206ENST00000543356 IFIT2P09913 472 aaKnown RBP11.42□□□□□ -0.58
GNE-206ENST00000543356 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
GNE-206ENST00000543356 CHMP3Q9Y3E7 222 aa11.42□□□□□ -0.58
GNE-206ENST00000543356 CLEC4GQ6UXB4 293 aa11.42□□□□□ -0.58
GNE-206ENST00000543356 AACSQ86V21 672 aa11.42□□□□□ -0.58
GNE-206ENST00000543356 C22orf23Q9BZE7 217 aa11.42□□□□□ -0.58
GNE-206ENST00000543356 ERC2O15083 957 aa11.41□□□□□ -0.58
GNE-206ENST00000543356 RPS6KA4O75676 772 aa11.41□□□□□ -0.58
GNE-206ENST00000543356 GLRX3O76003 335 aaKnown RBP11.41□□□□□ -0.58
GNE-206ENST00000543356 ECHDC1Q9NTX5 307 aa11.41□□□□□ -0.58
GNE-206ENST00000543356 TRMT112Q9UI30 125 aaKnown RBP11.41□□□□□ -0.58
GNE-206ENST00000543356 RBM25P49756 843 aaKnown RBP11.41□□□□□ -0.58
GNE-206ENST00000543356 CTSWP56202 376 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms