RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 GOLGA6L4A6NEF3 574 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 HCLS1P14317 486 aaPredicted RBP9.36□□□□□ -0.91
LRP6-206ENST00000543091 GIGYF2Q6Y7W6 1299 aaKnown RBP9.36□□□□□ -0.91
LRP6-206ENST00000543091 FNBP4Q8N3X1 1017 aaPredicted RBP9.36□□□□□ -0.91
LRP6-206ENST00000543091 ZGPATQ8N5A5 531 aaKnown RBP9.36□□□□□ -0.91
LRP6-206ENST00000543091 MARCH10Q8NA82 808 aaPredicted RBP9.36□□□□□ -0.91
LRP6-206ENST00000543091 KDRP35968 1356 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 GCKRQ14397 625 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 ADGRB2O60241 1585 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 MSL1Q68DK7 614 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 NFXL1Q6ZNB6 911 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 AIDAQ96BJ3 306 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 CCDC8Q9H0W5 538 aaPredicted RBP9.36□□□□□ -0.91
LRP6-206ENST00000543091 ECHDC1Q9NTX5 307 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 CTNNA3Q9UI47 895 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 ERVV-1B6SEH8 477 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 PSMA5P28066 241 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 SUPT20HQ8NEM7 779 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 HDAC9Q9UKV0 1011 aa9.36□□□□□ -0.91
LRP6-206ENST00000543091 CD163L1Q9NR16 1453 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 DHX16O60231 1041 aaKnown RBP9.35□□□□□ -0.91
LRP6-206ENST00000543091 TTLL7Q6ZT98 887 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 CCDC125Q86Z20 511 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 ZNF853P0CG23 659 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 RHPN1Q8TCX5 695 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 CWC22Q9HCG8 908 aaKnown RBP9.35□□□□□ -0.91
LRP6-206ENST00000543091 KNDC1Q76NI1 1749 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 CPLX1O14810 134 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 OGFOD1Q8N543 542 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 CNKSR1Q969H4 720 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 PDE4AP27815 886 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 BOLA2Q9H3K6 86 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 ZNF287Q9HBT7 754 aa9.35□□□□□ -0.91
LRP6-206ENST00000543091 IFT172Q9UG01 1749 aa9.34□□□□□ -0.91
LRP6-206ENST00000543091 KCNQ2O43526 872 aa9.34□□□□□ -0.91
LRP6-206ENST00000543091 CLEC4GQ6UXB4 293 aa9.34□□□□□ -0.91
LRP6-206ENST00000543091 PCCAP05165 728 aaPredicted RBP9.34□□□□□ -0.91
LRP6-206ENST00000543091 TDO2P48775 406 aa9.34□□□□□ -0.91
LRP6-206ENST00000543091 GSTO1P78417 241 aa9.34□□□□□ -0.91
LRP6-206ENST00000543091 MYO1BO43795 1136 aa9.34□□□□□ -0.91
LRP6-206ENST00000543091 BAG3O95817 575 aa9.34□□□□□ -0.91
LRP6-206ENST00000543091 ITGA6P23229 1130 aa9.34□□□□□ -0.91
LRP6-206ENST00000543091 NOL8Q76FK4 1167 aaKnown RBP9.34□□□□□ -0.91
LRP6-206ENST00000543091 NEURL1BA8MQ27 555 aa9.33□□□□□ -0.92
LRP6-206ENST00000543091 KCNQ4P56696 695 aa9.33□□□□□ -0.92
LRP6-206ENST00000543091 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
LRP6-206ENST00000543091 BICC1Q9H694 974 aaKnown RBP9.33□□□□□ -0.92
LRP6-206ENST00000543091 USP5P45974 858 aa9.33□□□□□ -0.92
LRP6-206ENST00000543091 ZBTB38Q8NAP3 1195 aaPredicted RBP9.33□□□□□ -0.92
LRP6-206ENST00000543091 HDAC1Q13547 482 aaPredicted RBP9.33□□□□□ -0.92
LRP6-206ENST00000543091 SOGA3Q5TF21 947 aa9.33□□□□□ -0.92
LRP6-206ENST00000543091 FAM184AQ8NB25 1140 aa9.33□□□□□ -0.92
LRP6-206ENST00000543091 EYA2O00167 538 aa9.33□□□□□ -0.92
LRP6-206ENST00000543091 SMARCA5O60264 1052 aaPredicted RBP9.33□□□□□ -0.92
LRP6-206ENST00000543091 SERPINB2P05120 415 aa9.33□□□□□ -0.92
LRP6-206ENST00000543091 NKX1-1Q15270 411 aaPredicted RBP9.33□□□□□ -0.92
LRP6-206ENST00000543091 C2CD5Q86YS7 1000 aa9.33□□□□□ -0.92
LRP6-206ENST00000543091 GGA1Q9UJY5 639 aa9.33□□□□□ -0.92
LRP6-206ENST00000543091 SSFA2P28290 1259 aa9.32□□□□□ -0.92
LRP6-206ENST00000543091 DPP8Q6V1X1 898 aaPredicted RBP9.32□□□□□ -0.92
LRP6-206ENST00000543091 NARFQ9UHQ1 456 aa9.32□□□□□ -0.92
LRP6-206ENST00000543091 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.32□□□□□ -0.92
LRP6-206ENST00000543091 COL5A2P05997 1499 aaPredicted RBP9.32□□□□□ -0.92
LRP6-206ENST00000543091 RPS8P62241 208 aaKnown RBP9.32□□□□□ -0.92
LRP6-206ENST00000543091 WWC3Q9ULE0 1092 aa9.32□□□□□ -0.92
LRP6-206ENST00000543091 UFL1O94874 794 aa9.32□□□□□ -0.92
LRP6-206ENST00000543091 MAP4K4O95819 1239 aaPredicted RBP9.32□□□□□ -0.92
LRP6-206ENST00000543091 TMC4Q7Z404 712 aa9.32□□□□□ -0.92
LRP6-206ENST00000543091 XRN1Q8IZH2 1706 aaKnown RBP9.32□□□□□ -0.92
LRP6-206ENST00000543091 IKQ13123 557 aaPredicted RBP9.31□□□□□ -0.92
LRP6-206ENST00000543091 TRIM29Q14134 588 aa9.31□□□□□ -0.92
LRP6-206ENST00000543091 GPR162Q16538 588 aa9.31□□□□□ -0.92
LRP6-206ENST00000543091 RRP12Q5JTH9 1297 aaKnown RBP9.31□□□□□ -0.92
LRP6-206ENST00000543091 RC3H1Q5TC82 1133 aaKnown RBP9.31□□□□□ -0.92
LRP6-206ENST00000543091 CRACR2BQ8N4Y2 399 aaPredicted RBP9.31□□□□□ -0.92
LRP6-206ENST00000543091 FMN2Q9NZ56 1722 aa9.31□□□□□ -0.92
LRP6-206ENST00000543091 IQSEC2Q5JU85 1478 aa9.31□□□□□ -0.92
LRP6-206ENST00000543091 CEP85Q6P2H3 762 aa9.31□□□□□ -0.92
LRP6-206ENST00000543091 EVI5LQ96CN4 794 aa9.31□□□□□ -0.92
LRP6-206ENST00000543091 CHD2O14647 1828 aaKnown RBP9.31□□□□□ -0.92
LRP6-206ENST00000543091 MARCH6O60337 910 aa9.31□□□□□ -0.92
LRP6-206ENST00000543091 WDHD1O75717 1129 aaPredicted RBP9.31□□□□□ -0.92
LRP6-206ENST00000543091 POLR3DP05423 398 aaPredicted RBP9.31□□□□□ -0.92
LRP6-206ENST00000543091 ZFYP08048 801 aaPredicted RBP9.31□□□□□ -0.92
LRP6-206ENST00000543091 CYP19A1P11511 503 aaPredicted RBP9.31□□□□□ -0.92
LRP6-206ENST00000543091 LMOD1P29536 600 aaPredicted RBP9.31□□□□□ -0.92
LRP6-206ENST00000543091 CTSWP56202 376 aa9.31□□□□□ -0.92
LRP6-206ENST00000543091 CCDC34Q96HJ3 373 aa9.31□□□□□ -0.92
LRP6-206ENST00000543091 ZBTB40Q9NUA8 1239 aa9.31□□□□□ -0.92
LRP6-206ENST00000543091 BCS1LQ9Y276 419 aa9.31□□□□□ -0.92
LRP6-206ENST00000543091 NBR1Q14596 966 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 LARGE2Q8N3Y3 721 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 CCDC24Q8N4L8 307 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 HELBQ8NG08 1087 aaPredicted RBP9.3□□□□□ -0.92
LRP6-206ENST00000543091 NWD1Q149M9 1564 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 GOLIM4O00461 696 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 MMP10P09238 476 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 PROSER3Q2NL68 480 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 MPNDQ8N594 471 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 IPO9Q96P70 1041 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms