RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 USP44Q9H0E7 712 aa9.6□□□□□ -0.87
PRKAB1-207ENST00000542698 BABAM1Q9NWV8 329 aa9.6□□□□□ -0.87
PRKAB1-207ENST00000542698 AOX1Q06278 1338 aa9.6□□□□□ -0.87
PRKAB1-207ENST00000542698 GOLIM4O00461 696 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 EPB41L2O43491 1005 aaKnown RBP9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 TYRO3Q06418 890 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 NMIQ13287 307 aaPredicted RBP9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 CCAR1Q8IX12 1150 aaKnown RBP9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 GPT2Q8TD30 523 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 CHAMP1Q96JM3 812 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 PALD1Q9ULE6 856 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 LAMC1P11047 1609 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 KIF13AQ9H1H9 1805 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 MAP3K5Q99683 1374 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 RAD50Q92878 1312 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 PPFIA3O75145 1194 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 NBPF7P0C2Y1 421 aaPredicted RBP9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 FILIP1LQ4L180 1135 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 CERKQ8TCT0 537 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 UBXN4Q92575 508 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 OSBPL3Q9H4L5 887 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 HOXC9P31274 260 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 STX1AQ16623 288 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 TOM1L2Q6ZVM7 507 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 DDX46Q7L014 1031 aaKnown RBP9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 COPS6Q7L5N1 327 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 PCMTD1Q96MG8 357 aaPredicted RBP9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 LRRC2Q9BYS8 371 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 BRMS1Q9HCU9 246 aa9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 CCDC47Q96A33 483 aaKnown RBP9.59□□□□□ -0.87
PRKAB1-207ENST00000542698 CCDC171Q6TFL3 1326 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 PLEKHG3A1L390 1219 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 MARCH6O60337 910 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 IDH1O75874 414 aaKnown RBP9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 CCDC70Q6NSX1 233 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 AKAP2Q9Y2D5 859 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 PAXBP1Q9Y5B6 917 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 SLC3A2P08195 630 aaKnown RBP9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 HSP90B2PQ58FF3 399 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 STK11IPQ8N1F8 1099 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 XAGE3Q8WTP9 111 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 DNAJC25Q9H1X3 360 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 ZNF500O60304 480 aaPredicted RBP9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 GSDMDP57764 484 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 SSH3Q8TE77 659 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 ANKRD24Q8TF21 1146 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 NACAP1Q9BZK3 213 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 DACH1Q9UI36 760 aa9.58□□□□□ -0.88
PRKAB1-207ENST00000542698 CCDC69A6NI79 296 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 MCMDC2Q4G0Z9 681 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 Q6ZUG5 572 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 KIF1BO60333 1816 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 MAP3K4Q9Y6R4 1608 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 ARAP3Q8WWN8 1544 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 SBNO1A3KN83 1393 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 AATKQ6ZMQ8 1374 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 IBTKQ9P2D0 1353 aaPredicted RBP9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 SPDYE4A6NLX3 237 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 ZNF213O14771 459 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 POLR3DP05423 398 aaPredicted RBP9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 SNRPA1P09661 255 aaKnown RBP9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 SLC39A6Q13433 755 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 TTLL5Q6EMB2 1281 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 FAM173BQ6P4H8 233 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 LUZP1Q86V48 1076 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 ORC3Q9UBD5 711 aaPredicted RBP9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 BIN1O00499 593 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 DTNBO60941 627 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 ADRA2BP18089 450 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 PPFIBP1Q86W92 1011 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 LRRC59Q96AG4 307 aaKnown RBP9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 PRDM11Q9NQV5 511 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 USP16Q9Y5T5 823 aa9.57□□□□□ -0.88
PRKAB1-207ENST00000542698 CLTCL1P53675 1640 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 HOXB7P09629 217 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 SKILP12757 684 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 PTGS1P23219 599 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 IFNL2Q8IZJ0 200 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 PIBF1Q8WXW3 757 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 STRN4Q9NRL3 753 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 CGNQ9P2M7 1197 aaKnown RBP9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 METTL24Q5JXM2 366 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 CEP135Q66GS9 1140 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 SIRT1Q96EB6 747 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 SNRKQ9NRH2 765 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 GOLGA8BA8MQT2 603 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 NUP133Q8WUM0 1156 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 SMARCE1Q969G3 411 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 ACBD3Q9H3P7 528 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 TET3O43151 1660 aa9.56□□□□□ -0.88
PRKAB1-207ENST00000542698 HAND2P61296 217 aa9.55□□□□□ -0.88
PRKAB1-207ENST00000542698 LMBR1LQ6UX01 489 aa9.55□□□□□ -0.88
PRKAB1-207ENST00000542698 IL17REQ8NFR9 667 aa9.55□□□□□ -0.88
PRKAB1-207ENST00000542698 IP6K1Q92551 441 aa9.55□□□□□ -0.88
PRKAB1-207ENST00000542698 MPHOSPH8Q99549 860 aa9.55□□□□□ -0.88
PRKAB1-207ENST00000542698 LGR6Q9HBX8 967 aa9.55□□□□□ -0.88
PRKAB1-207ENST00000542698 STAP2Q9UGK3 403 aa9.55□□□□□ -0.88
PRKAB1-207ENST00000542698 ZFYVE16Q7Z3T8 1539 aa9.55□□□□□ -0.88
PRKAB1-207ENST00000542698 MADDQ8WXG6 1647 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms