RNA–Protein interactions for RNA: ENST00000542550.5

CAPRIN2-213, Transcript of caprin family member 2, human

TSL 3

Gene CAPRIN2, Length 770 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN2-213	ENST00000542550	C8orf58	Q8NAV2	365 aa		33.95	■■■■□ 3.03
CAPRIN2-213	ENST00000542550	RRAGC	Q9HB90	399 aa		33.95	■■■■□ 3.03
CAPRIN2-213	ENST00000542550	TNRC6C	Q9HCJ0	1690 aa	Known RBP	33.95	■■■■□ 3.03
CAPRIN2-213	ENST00000542550	LTBP3	Q9NS15	1303 aa		33.95	■■■■□ 3.03
CAPRIN2-213	ENST00000542550	CCDC27	Q2M243	656 aa		33.94	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	WWC1	Q8IX03	1113 aa		33.94	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	PLBD2	Q8NHP8	589 aa		33.94	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	C3orf67	Q6ZVT6	689 aa		33.93	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	CACNA1S	Q13698	1873 aa		33.93	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	TSR2	Q969E8	191 aa	Known RBP	33.92	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	ZNF428	Q96B54	188 aa		33.92	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	NLRP3	Q96P20	1036 aa		33.92	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	SALL2	Q9Y467	1007 aa	Predicted RBP	33.92	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	RIC1	Q4ADV7	1423 aa		33.92	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	TOMM70	O94826	608 aa		33.91	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	C16orf71	Q8IYS4	520 aa	Predicted RBP	33.91	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	TRMT112	Q9UI30	125 aa	Known RBP	33.91	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	GLTPD2	A6NH11	291 aa		33.9	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	RBM17	Q96I25	401 aa	Known RBP	33.9	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	HOXA10	P31260	410 aa	Predicted RBP	33.89	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	SLC10A5	Q5PT55	438 aa		33.89	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	ARFGEF2	Q9Y6D5	1785 aa		33.89	■■■■□ 3.02
CAPRIN2-213	ENST00000542550	FER1L6	Q2WGJ9	1857 aa		33.88	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	RTKN2	Q8IZC4	609 aa		33.88	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	SYNE4	Q8N205	404 aa		33.88	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	PHAX	Q9H814	394 aa	Known RBP	33.88	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	RNF123	Q5XPI4	1314 aa		33.87	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	HCLS1	P14317	486 aa	Predicted RBP	33.87	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.87	■■■■□ 3.01	7e-7	■■■■□ 25.7
CAPRIN2-213	ENST00000542550	DPY19L2	Q6NUT2	758 aa		33.87	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	FAM9B	Q8IZU0	186 aa		33.87	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	TSPYL6	Q8N831	410 aa		33.87	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	ATP5J2-PTCD1	G3V325	749 aa		33.86	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	CRAMP1	Q96RY5	1269 aa		33.86	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	TCERG1	O14776	1098 aa	Known RBP	33.85	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	GOLGA2	Q08379	1002 aa		33.85	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	CCDC30	Q5VVM6	783 aa		33.85	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	RIC3	Q7Z5B4	369 aa		33.85	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.85	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	SH3TC1	Q8TE82	1336 aa		33.84	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	ISCA1	Q9BUE6	129 aa		33.84	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	CCDC88A	Q3V6T2	1871 aa		33.84	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	HSPA6	P17066	643 aa		33.83	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	NCBP3	Q53F19	620 aa	Known RBP	33.83	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	CHMP4A	Q9BY43	222 aa		33.83	■■■■□ 3.01
CAPRIN2-213	ENST00000542550	TIAM2	Q8IVF5	1701 aa		33.82	■■■■□ 3
CAPRIN2-213	ENST00000542550	PPEF1	O14829	653 aa	Predicted RBP	33.82	■■■■□ 3
CAPRIN2-213	ENST00000542550	IL16	Q14005	1332 aa		33.81	■■■■□ 3
CAPRIN2-213	ENST00000542550	ANKRD36C	Q5JPF3	1778 aa		33.8	■■■■□ 3
CAPRIN2-213	ENST00000542550	VEGFA	P15692	232 aa	Predicted RBP	33.8	■■■■□ 3
CAPRIN2-213	ENST00000542550	CC2D2B	Q6DHV5	1058 aa		33.8	■■■■□ 3
CAPRIN2-213	ENST00000542550	RBM46	Q8TBY0	533 aa	Known RBP	33.8	■■■■□ 3
CAPRIN2-213	ENST00000542550	SLC51A	Q86UW1	340 aa		33.79	■■■■□ 3
CAPRIN2-213	ENST00000542550	FAM89A	Q96GI7	184 aa		33.79	■■■■□ 3
CAPRIN2-213	ENST00000542550	TWISTNB	Q3B726	338 aa	Predicted RBP	33.77	■■■■□ 3
CAPRIN2-213	ENST00000542550	RTL5	Q5HYW3	569 aa	Predicted RBP	33.77	■■■■□ 3
CAPRIN2-213	ENST00000542550	ABCC4	O15439	1325 aa		33.77	■■■■□ 3
CAPRIN2-213	ENST00000542550	DDN	O94850	711 aa	Predicted RBP	33.76	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	IARS	P41252	1262 aa	Known RBP	33.76	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	WDR63	Q8IWG1	891 aa		33.76	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	PSMD1	Q99460	953 aa		33.76	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	MYD88	Q99836	296 aa		33.76	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	STK31	Q9BXU1	1019 aa		33.76	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	TMX4	Q9H1E5	349 aa	Predicted RBP	33.76	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	DDX58	O95786	925 aa	Known RBP	33.75	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	DDX46	Q7L014	1031 aa	Known RBP	33.75	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	TRIM28	Q13263	835 aa	Known RBP	33.74	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	FANCI	Q9NVI1	1328 aa		33.74	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	SNED1	Q8TER0	1413 aa		33.73	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	POTEC	B2RU33	542 aa		33.73	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	GRIPAP1	Q4V328	841 aa		33.73	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	ATP6V0A2	Q9Y487	856 aa		33.72	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	DICER1	Q9UPY3	1922 aa	Known RBP	33.72	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	BBOX1	O75936	387 aa		33.71	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	FSTL1	Q12841	308 aa		33.7	■■■□□ 2.99
CAPRIN2-213	ENST00000542550	IRS4	O14654	1257 aa	Predicted RBP	33.69	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	GRAP	Q13588	217 aa		33.69	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	SMC1B	Q8NDV3	1235 aa		33.69	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	GRAPL	Q8TC17	118 aa	Predicted RBP	33.69	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	JDP2	Q8WYK2	163 aa		33.69	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	METTL22	Q9BUU2	404 aa	Predicted RBP	33.69	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	MAP3K2	Q9Y2U5	619 aa		33.69	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	SLC4A2	P04920	1241 aa		33.68	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	ZNF541	Q9H0D2	1346 aa		33.68	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	33.67	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	CCDC191	Q8NCU4	936 aa		33.67	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	PI4KAP2	A4QPH2	592 aa		33.66	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	APLP1	P51693	650 aa		33.66	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	KSR2	Q6VAB6	950 aa		33.66	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	SP8	Q8IXZ3	490 aa		33.66	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	LARGE2	Q8N3Y3	721 aa		33.66	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	PI4KAP1	Q8N8J0	262 aa		33.66	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.66	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	CWC25	Q9NXE8	425 aa	Predicted RBP	33.66	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	WDR90	Q96KV7	1748 aa		33.65	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	FZD9	O00144	591 aa		33.65	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	EXOSC9	Q06265	439 aa	Known RBP	33.65	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	SF3B3	Q15393	1217 aa	Known RBP	33.65	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	G2E3	Q7L622	706 aa		33.65	■■■□□ 2.98
CAPRIN2-213	ENST00000542550	JARID2	Q92833	1246 aa	Predicted RBP	33.64	■■■□□ 2.98

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms