RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 PTPRCP08575 1304 aa10.23□□□□□ -0.77
FNDC3A-206ENST00000541916 NOD1Q9Y239 953 aa10.23□□□□□ -0.77
FNDC3A-206ENST00000541916 POLR3AO14802 1390 aaPredicted RBP10.23□□□□□ -0.77
FNDC3A-206ENST00000541916 RNF181Q9P0P0 153 aa10.23□□□□□ -0.77
FNDC3A-206ENST00000541916 ADCY10Q96PN6 1610 aa10.23□□□□□ -0.77
FNDC3A-206ENST00000541916 CTCFLQ8NI51 663 aaPredicted RBP10.23□□□□□ -0.77
FNDC3A-206ENST00000541916 TSHZ2Q9NRE2 1034 aa10.23□□□□□ -0.77
FNDC3A-206ENST00000541916 SERPINB2P05120 415 aa10.22□□□□□ -0.77
FNDC3A-206ENST00000541916 MSNP26038 577 aaKnown RBP10.22□□□□□ -0.77
FNDC3A-206ENST00000541916 TNFAIP1Q13829 316 aa10.22□□□□□ -0.77
FNDC3A-206ENST00000541916 ERFEQ4G0M1 354 aa10.22□□□□□ -0.77
FNDC3A-206ENST00000541916 FAM89AQ96GI7 184 aa10.22□□□□□ -0.77
FNDC3A-206ENST00000541916 IPO9Q96P70 1041 aaKnown RBP10.22□□□□□ -0.77
FNDC3A-206ENST00000541916 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.22□□□□□ -0.776e-7■■■■■ 167.7
FNDC3A-206ENST00000541916 ROBO2Q9HCK4 1378 aa10.22□□□□□ -0.77
FNDC3A-206ENST00000541916 SSBP05455 408 aaKnown RBP eCLIP10.22□□□□□ -0.77
FNDC3A-206ENST00000541916 CRKLP46109 303 aaKnown RBP10.22□□□□□ -0.77
FNDC3A-206ENST00000541916 CCDC125Q86Z20 511 aa10.22□□□□□ -0.77
FNDC3A-206ENST00000541916 MMP10P09238 476 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 TSPY3P0CV98 308 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 TSPY8P0CW00 308 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 ALDH1L2Q3SY69 923 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 CCDC93Q567U6 631 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 CT47A1Q5JQC4 288 aaPredicted RBP10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 SH2D4AQ9H788 454 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 ZFYVE9O95405 1425 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 PHKG2P15735 406 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 RFX1P22670 979 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 ODF2Q5BJF6 829 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 CWC27Q6UX04 472 aaKnown RBP10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 DRC1Q96MC2 740 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 NOL7Q9UMY1 257 aaKnown RBP10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 GOLIM4O00461 696 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 PDE8AO60658 829 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 CDKL5O76039 1030 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 HIBADHP31937 336 aaKnown RBP10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 TTLL6Q8N841 843 aa10.21□□□□□ -0.77
FNDC3A-206ENST00000541916 PPP1R12BO60237 982 aaPredicted RBP10.21□□□□□ -0.78
FNDC3A-206ENST00000541916 VAT1LQ9HCJ6 419 aa10.21□□□□□ -0.78
FNDC3A-206ENST00000541916 TPM1P09493 284 aa10.21□□□□□ -0.78
FNDC3A-206ENST00000541916 DEKP35659 375 aaKnown RBP10.21□□□□□ -0.78
FNDC3A-206ENST00000541916 IL27Q8NEV9 243 aa10.21□□□□□ -0.78
FNDC3A-206ENST00000541916 KAT14Q9H8E8 782 aa10.21□□□□□ -0.78
FNDC3A-206ENST00000541916 VPS72Q15906 364 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 BRDTQ58F21 947 aaPredicted RBP10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 USP48Q86UV5 1035 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 DNAI2Q9GZS0 605 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 ARHGEF5Q12774 1597 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 FANCIQ9NVI1 1328 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 GRM8O00222 908 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 TXNRD1Q16881 649 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 PLBD2Q8NHP8 589 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 BICD2Q8TD16 824 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 MAP3K4Q9Y6R4 1608 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 ARAP3Q8WWN8 1544 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 IRX3P78415 501 aaPredicted RBP10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 TRAF1Q13077 416 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 SLC27A3Q5K4L6 730 aa10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 GPHNQ9NQX3 736 aaPredicted RBP10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 PPEF1O14829 653 aaPredicted RBP10.2□□□□□ -0.78
FNDC3A-206ENST00000541916 ALDH1L1O75891 902 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 GLRX3O76003 335 aaKnown RBP10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 PDE4AP27815 886 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 MAP3K9P80192 1104 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 ARMC9Q7Z3E5 817 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 ILDR1Q86SU0 546 aaPredicted RBP10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 KDM2BQ8NHM5 1336 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 ZNF213O14771 459 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 IL15P40933 162 aaPredicted RBP10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 LGR6Q9HBX8 967 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 U3KPZ7 1027 aaPredicted RBP10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 TPM3P06753 285 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 STX8Q9UNK0 236 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 PRKAG2Q9UGJ0 569 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 DENND2AQ9ULE3 1009 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 CAMSAP1Q5T5Y3 1602 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 RIMS1Q86UR5 1692 aaKnown RBP10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 STK3Q13188 491 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 TMEM57Q8N5G2 664 aa10.19□□□□□ -0.78
FNDC3A-206ENST00000541916 PDE3AQ14432 1141 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 ADGRL2O95490 1459 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 RAB3GAP1Q15042 981 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 TAOK3Q9H2K8 898 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 SAMM50Q9Y512 469 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 CYP46A1Q9Y6A2 500 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 ITGA6P23229 1130 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 DOK7Q18PE1 504 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 ZFYVE27Q5T4F4 411 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 TRMT1LQ7Z2T5 733 aaKnown RBP10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 CATIPQ7Z7H3 387 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 BMP2KQ9NSY1 1161 aaPredicted RBP10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 SLC5A4Q9NY91 659 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 MAGEB6P1A0A0J9YX57 407 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 ARHGEF25Q86VW2 580 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 C2orf69Q8N8R5 385 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 WASF1Q92558 559 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 PPM1FP49593 454 aaPredicted RBP10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 DCAF15Q66K64 600 aa10.18□□□□□ -0.78
FNDC3A-206ENST00000541916 CKAP2LQ8IYA6 745 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms