RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 RHOXF2Q9BQY4 288 aa12.73□□□□□ -0.37
ERBB2-204ENST00000541774 TRIM29Q14134 588 aa12.73□□□□□ -0.37
ERBB2-204ENST00000541774 MMS22LQ6ZRQ5 1243 aa12.73□□□□□ -0.37
ERBB2-204ENST00000541774 CCDC121Q6ZUS5 278 aa12.73□□□□□ -0.37
ERBB2-204ENST00000541774 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
ERBB2-204ENST00000541774 USP19O94966 1318 aa12.73□□□□□ -0.37
ERBB2-204ENST00000541774 CTAGE15A4D2H0 777 aa12.73□□□□□ -0.37
ERBB2-204ENST00000541774 CTAGE8P0CG41 777 aa12.73□□□□□ -0.37
ERBB2-204ENST00000541774 CTAGE6Q86UF2 777 aa12.73□□□□□ -0.37
ERBB2-204ENST00000541774 CTAGE4Q8IX94 777 aa12.73□□□□□ -0.37
ERBB2-204ENST00000541774 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
ERBB2-204ENST00000541774 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.73□□□□□ -0.37
ERBB2-204ENST00000541774 RPGRIP1LQ68CZ1 1315 aa12.73□□□□□ -0.37
ERBB2-204ENST00000541774 RTEL1-TNFRSF6BF6WH68 1400 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 FRMD3A2A2Y4 597 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 BIN1O00499 593 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 ANKLE2Q86XL3 938 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 JPH2Q9BR39 696 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-204ENST00000541774 CAPN7Q9Y6W3 813 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 SLFN14P0C7P3 912 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 SYT1P21579 422 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 GJB2P29033 226 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 ZNF75DP51815 510 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 SATB1Q01826 763 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 FAM76AQ8TAV0 307 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 NDUFAB1O14561 156 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 MAP4K4O95819 1239 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-204ENST00000541774 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-204ENST00000541774 ZNF710Q8N1W2 664 aa12.72□□□□□ -0.37
ERBB2-204ENST00000541774 MICAL1Q8TDZ2 1067 aa12.71□□□□□ -0.37
ERBB2-204ENST00000541774 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
ERBB2-204ENST00000541774 YEATS2Q9ULM3 1422 aa12.71□□□□□ -0.37
ERBB2-204ENST00000541774 EFCAB13Q8IY85 973 aa12.71□□□□□ -0.37
ERBB2-204ENST00000541774 DDX54Q8TDD1 881 aaKnown RBP12.71□□□□□ -0.37
ERBB2-204ENST00000541774 ANKRD1Q15327 319 aa12.71□□□□□ -0.37
ERBB2-204ENST00000541774 MSL1Q68DK7 614 aa12.71□□□□□ -0.37
ERBB2-204ENST00000541774 B4GALNT4Q76KP1 1039 aa12.71□□□□□ -0.37
ERBB2-204ENST00000541774 CPLX3Q8WVH0 158 aa12.71□□□□□ -0.37
ERBB2-204ENST00000541774 RAD50Q92878 1312 aa12.71□□□□□ -0.38
ERBB2-204ENST00000541774 FBXO18Q8NFZ0 1043 aa12.71□□□□□ -0.38
ERBB2-204ENST00000541774 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.38
ERBB2-204ENST00000541774 TTC37Q6PGP7 1564 aa12.71□□□□□ -0.38
ERBB2-204ENST00000541774 ATF3P18847 181 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 EIF2S2P20042 333 aaKnown RBP12.7□□□□□ -0.38
ERBB2-204ENST00000541774 GUCY2CP25092 1073 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 GYS2P54840 703 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 NEDD9Q14511 834 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 PRAG1Q86YV5 1406 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 A0A087WUV0 522 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-204ENST00000541774 FOXO3O43524 673 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 F13A1P00488 732 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 BLOC1S2Q6QNY1 142 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 SURF6O75683 361 aaKnown RBP12.7□□□□□ -0.38
ERBB2-204ENST00000541774 SULT6B1Q6IMI4 303 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 AOPEPQ8N6M6 819 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 SUDS3Q9H7L9 328 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-204ENST00000541774 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-204ENST00000541774 EMILIN1Q9Y6C2 1016 aa12.7□□□□□ -0.38
ERBB2-204ENST00000541774 CCDC175P0C221 793 aa12.69□□□□□ -0.38
ERBB2-204ENST00000541774 CEP85LQ5SZL2 805 aa12.69□□□□□ -0.38
ERBB2-204ENST00000541774 TTC22Q5TAA0 569 aa12.69□□□□□ -0.38
ERBB2-204ENST00000541774 ODF2LQ9ULJ1 636 aa12.69□□□□□ -0.38
ERBB2-204ENST00000541774 PNMA6AP0CW24 399 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-204ENST00000541774 TWISTNBQ3B726 338 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-204ENST00000541774 ZNHIT6Q9NWK9 470 aaKnown RBP12.69□□□□□ -0.38
ERBB2-204ENST00000541774 ARHGEF12Q9NZN5 1544 aa12.69□□□□□ -0.38
ERBB2-204ENST00000541774 GOLGA6L10A0A0M3HER8 536 aa12.69□□□□□ -0.38
ERBB2-204ENST00000541774 CWC27Q6UX04 472 aaKnown RBP12.69□□□□□ -0.38
ERBB2-204ENST00000541774 RPAP2Q8IXW5 612 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-204ENST00000541774 CEP89Q96ST8 783 aa12.69□□□□□ -0.38
ERBB2-204ENST00000541774 SEC31AO94979 1220 aaKnown RBP12.69□□□□□ -0.38
ERBB2-204ENST00000541774 HSPA2P54652 639 aa12.69□□□□□ -0.38
ERBB2-204ENST00000541774 MAP2K1Q02750 393 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-204ENST00000541774 KMT5BQ4FZB7 885 aa12.69□□□□□ -0.38
ERBB2-204ENST00000541774 N4BP2L2Q92802 583 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-204ENST00000541774 CYP2C19P33261 490 aa12.68□□□□□ -0.38
ERBB2-204ENST00000541774 CLCN6P51797 869 aa12.68□□□□□ -0.38
ERBB2-204ENST00000541774 FSIP1Q8NA03 581 aa12.68□□□□□ -0.38
ERBB2-204ENST00000541774 EXOC4Q96A65 974 aa12.68□□□□□ -0.38
ERBB2-204ENST00000541774 CBX8Q9HC52 389 aa12.68□□□□□ -0.38
ERBB2-204ENST00000541774 ST7Q9NRC1 585 aa12.68□□□□□ -0.38
ERBB2-204ENST00000541774 SH2B1Q9NRF2 756 aaPredicted RBP12.68□□□□□ -0.38
ERBB2-204ENST00000541774 EIF3CLB5ME19 914 aaKnown RBP12.68□□□□□ -0.38
ERBB2-204ENST00000541774 SDSP20132 328 aa12.68□□□□□ -0.38
ERBB2-204ENST00000541774 LRRFIP1Q32MZ4 808 aaKnown RBP12.68□□□□□ -0.38
ERBB2-204ENST00000541774 EIF3CQ99613 913 aaKnown RBP12.68□□□□□ -0.38
ERBB2-204ENST00000541774 UTP14AQ9BVJ6 771 aaKnown RBP12.68□□□□□ -0.38
ERBB2-204ENST00000541774 SRCIN1Q9C0H9 1055 aa12.68□□□□□ -0.38
ERBB2-204ENST00000541774 WDHD1O75717 1129 aaPredicted RBP12.67□□□□□ -0.38
ERBB2-204ENST00000541774 KIF5BP33176 963 aa12.67□□□□□ -0.38
ERBB2-204ENST00000541774 UBASH3AP57075 661 aa12.67□□□□□ -0.38
ERBB2-204ENST00000541774 ZC3H6P61129 1189 aaKnown RBP12.67□□□□□ -0.38
ERBB2-204ENST00000541774 KARSQ15046 597 aaKnown RBP12.67□□□□□ -0.38
ERBB2-204ENST00000541774 IRAK4Q9NWZ3 460 aa12.67□□□□□ -0.38
ERBB2-204ENST00000541774 DACH1Q9UI36 760 aa12.67□□□□□ -0.38
ERBB2-204ENST00000541774 ELP1O95163 1332 aa12.67□□□□□ -0.38
ERBB2-204ENST00000541774 INTS4Q96HW7 963 aaKnown RBP12.67□□□□□ -0.38
ERBB2-204ENST00000541774 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms