RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 NTSR2O95665 410 aa11.85□□□□□ -0.51
SNHG1-215ENST00000540904 SRGNP10124 158 aa11.85□□□□□ -0.51
SNHG1-215ENST00000540904 ARHGAP27Q6ZUM4 889 aa11.85□□□□□ -0.51
SNHG1-215ENST00000540904 NLRP10Q86W26 655 aa11.85□□□□□ -0.51
SNHG1-215ENST00000540904 GOLGB1Q14789 3259 aaKnown RBP11.85□□□□□ -0.51
SNHG1-215ENST00000540904 ABCC12Q96J65 1359 aa11.84□□□□□ -0.51
SNHG1-215ENST00000540904 IBTKQ9P2D0 1353 aaPredicted RBP11.84□□□□□ -0.51
SNHG1-215ENST00000540904 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
SNHG1-215ENST00000540904 SLFN5Q08AF3 891 aa11.84□□□□□ -0.51
SNHG1-215ENST00000540904 CDCA7LQ96GN5 454 aa11.84□□□□□ -0.51
SNHG1-215ENST00000540904 NPR1P16066 1061 aa11.83□□□□□ -0.52
SNHG1-215ENST00000540904 STYK1Q6J9G0 422 aa11.83□□□□□ -0.52
SNHG1-215ENST00000540904 G2E3Q7L622 706 aa11.83□□□□□ -0.52
SNHG1-215ENST00000540904 CNKSR1Q969H4 720 aa11.83□□□□□ -0.52
SNHG1-215ENST00000540904 MASTLQ96GX5 879 aa11.83□□□□□ -0.52
SNHG1-215ENST00000540904 ISCA1Q9BUE6 129 aa11.83□□□□□ -0.52
SNHG1-215ENST00000540904 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
SNHG1-215ENST00000540904 TRMT112Q9UI30 125 aaKnown RBP11.83□□□□□ -0.52
SNHG1-215ENST00000540904 UTRNP46939 3433 aa11.82□□□□□ -0.52
SNHG1-215ENST00000540904 NUP98P52948 1817 aa11.82□□□□□ -0.52
SNHG1-215ENST00000540904 KLRG2A4D1S0 409 aaPredicted RBP11.82□□□□□ -0.52
SNHG1-215ENST00000540904 PI4KAP2A4QPH2 592 aa11.82□□□□□ -0.52
SNHG1-215ENST00000540904 ABCB7O75027 752 aa11.82□□□□□ -0.52
SNHG1-215ENST00000540904 FLIIQ13045 1269 aa11.82□□□□□ -0.52
SNHG1-215ENST00000540904 SYNE4Q8N205 404 aa11.82□□□□□ -0.52
SNHG1-215ENST00000540904 PI4KAP1Q8N8J0 262 aa11.82□□□□□ -0.52
SNHG1-215ENST00000540904 MYD88Q99836 296 aa11.82□□□□□ -0.52
SNHG1-215ENST00000540904 MAP3K2Q9Y2U5 619 aa11.82□□□□□ -0.52
SNHG1-215ENST00000540904 SH3TC1Q8TE82 1336 aa11.82□□□□□ -0.52
SNHG1-215ENST00000540904 ANKRD31Q8N7Z5 1873 aa11.81□□□□□ -0.52
SNHG1-215ENST00000540904 C21orf2O43822 256 aa11.81□□□□□ -0.52
SNHG1-215ENST00000540904 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
SNHG1-215ENST00000540904 HNRNPUQ00839 825 aaKnown RBP eCLIP11.81□□□□□ -0.52
SNHG1-215ENST00000540904 FKBP5Q13451 457 aaPredicted RBP11.81□□□□□ -0.52
SNHG1-215ENST00000540904 CRY2Q49AN0 593 aa11.81□□□□□ -0.52
SNHG1-215ENST00000540904 RTL5Q5HYW3 569 aaPredicted RBP11.81□□□□□ -0.52
SNHG1-215ENST00000540904 PRPF40BQ6NWY9 871 aaKnown RBP11.81□□□□□ -0.52
SNHG1-215ENST00000540904 KSR2Q6VAB6 950 aa11.81□□□□□ -0.52
SNHG1-215ENST00000540904 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
SNHG1-215ENST00000540904 RPGRQ92834 1020 aaKnown RBP11.81□□□□□ -0.52
SNHG1-215ENST00000540904 FAM89AQ96GI7 184 aa11.81□□□□□ -0.52
SNHG1-215ENST00000540904 NLRP3Q96P20 1036 aa11.81□□□□□ -0.52
SNHG1-215ENST00000540904 METTL22Q9BUU2 404 aaPredicted RBP11.81□□□□□ -0.52
SNHG1-215ENST00000540904 RNF123Q5XPI4 1314 aa11.81□□□□□ -0.52
SNHG1-215ENST00000540904 ADCY9O60503 1353 aa11.8□□□□□ -0.52
SNHG1-215ENST00000540904 TRIM28Q13263 835 aaKnown RBP11.8□□□□□ -0.52
SNHG1-215ENST00000540904 SLC10A5Q5PT55 438 aa11.8□□□□□ -0.52
SNHG1-215ENST00000540904 BRCA1P38398 1863 aaKnown RBP11.79□□□□□ -0.52
SNHG1-215ENST00000540904 ALDH1B1P30837 517 aa11.79□□□□□ -0.52
SNHG1-215ENST00000540904 NEXNQ0ZGT2 675 aa11.79□□□□□ -0.52
SNHG1-215ENST00000540904 CCDC191Q8NCU4 936 aa11.79□□□□□ -0.52
SNHG1-215ENST00000540904 CWC25Q9NXE8 425 aaPredicted RBP11.79□□□□□ -0.52
SNHG1-215ENST00000540904 COL11A2P13942 1736 aaPredicted RBP11.79□□□□□ -0.52
SNHG1-215ENST00000540904 RIC1Q4ADV7 1423 aa11.78□□□□□ -0.52
SNHG1-215ENST00000540904 IGKV5-2P06315 115 aa11.78□□□□□ -0.52
SNHG1-215ENST00000540904 RASSF7Q02833 373 aa11.78□□□□□ -0.52
SNHG1-215ENST00000540904 CWF19L2Q2TBE0 894 aaKnown RBP11.78□□□□□ -0.52
SNHG1-215ENST00000540904 TRMT2AQ8IZ69 625 aaKnown RBP11.78□□□□□ -0.52
SNHG1-215ENST00000540904 ZBTB38Q8NAP3 1195 aaPredicted RBP11.78□□□□□ -0.52
SNHG1-215ENST00000540904 JARID2Q92833 1246 aaPredicted RBP11.78□□□□□ -0.52
SNHG1-215ENST00000540904 RBM17Q96I25 401 aaKnown RBP11.78□□□□□ -0.52
SNHG1-215ENST00000540904 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
SNHG1-215ENST00000540904 DLEC1Q9Y238 1755 aa11.77□□□□□ -0.52
SNHG1-215ENST00000540904 F6X3S4 739 aa11.77□□□□□ -0.53
SNHG1-215ENST00000540904 IRS4O14654 1257 aaPredicted RBP11.77□□□□□ -0.53
SNHG1-215ENST00000540904 HOXA10P31260 410 aaPredicted RBP11.77□□□□□ -0.53
SNHG1-215ENST00000540904 C9orf131Q5VYM1 1079 aa11.77□□□□□ -0.53
SNHG1-215ENST00000540904 ZNF784Q8NCA9 323 aaPredicted RBP11.77□□□□□ -0.53
SNHG1-215ENST00000540904 DNAAF4Q8WXU2 420 aa11.77□□□□□ -0.53
SNHG1-215ENST00000540904 BCL2L13Q9BXK5 485 aa11.77□□□□□ -0.53
SNHG1-215ENST00000540904 ARFGEF2Q9Y6D5 1785 aa11.77□□□□□ -0.53
SNHG1-215ENST00000540904 NEURL1BA8MQ27 555 aa11.76□□□□□ -0.53
SNHG1-215ENST00000540904 NFKBIEO00221 500 aa11.76□□□□□ -0.53
SNHG1-215ENST00000540904 PCCAP05165 728 aaPredicted RBP11.76□□□□□ -0.53
SNHG1-215ENST00000540904 SOGA3Q5TF21 947 aa11.76□□□□□ -0.53
SNHG1-215ENST00000540904 OLFM4Q6UX06 510 aa11.76□□□□□ -0.53
SNHG1-215ENST00000540904 C7orf43Q8WVR3 580 aa11.76□□□□□ -0.53
SNHG1-215ENST00000540904 SSH1Q8WYL5 1049 aa11.76□□□□□ -0.53
SNHG1-215ENST00000540904 CRAMP1Q96RY5 1269 aa11.76□□□□□ -0.53
SNHG1-215ENST00000540904 RNF181Q9P0P0 153 aa11.76□□□□□ -0.53
SNHG1-215ENST00000540904 ANKRD36CQ5JPF3 1778 aa11.76□□□□□ -0.53
SNHG1-215ENST00000540904 ARFGEF1Q9Y6D6 1849 aa11.75□□□□□ -0.53
SNHG1-215ENST00000540904 PPEF1O14829 653 aaPredicted RBP11.75□□□□□ -0.53
SNHG1-215ENST00000540904 HSP90B1P14625 803 aaKnown RBP11.75□□□□□ -0.53
SNHG1-215ENST00000540904 LMNB1P20700 586 aa11.75□□□□□ -0.53
SNHG1-215ENST00000540904 CCDC93Q567U6 631 aa11.75□□□□□ -0.53
SNHG1-215ENST00000540904 DDX46Q7L014 1031 aaKnown RBP11.75□□□□□ -0.53
SNHG1-215ENST00000540904 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
SNHG1-215ENST00000540904 LINS1Q8NG48 757 aa11.75□□□□□ -0.53
SNHG1-215ENST00000540904 ABCC4O15439 1325 aa11.75□□□□□ -0.53
SNHG1-215ENST00000540904 CT47B1P0C2W7 299 aaPredicted RBP11.74□□□□□ -0.53
SNHG1-215ENST00000540904 PRELPP51888 382 aa11.74□□□□□ -0.53
SNHG1-215ENST00000540904 SLC4A10Q6U841 1118 aa11.74□□□□□ -0.53
SNHG1-215ENST00000540904 UBE3BQ7Z3V4 1068 aa11.74□□□□□ -0.53
SNHG1-215ENST00000540904 ZNF526Q8TF50 670 aaPredicted RBP11.74□□□□□ -0.53
SNHG1-215ENST00000540904 TAOK3Q9H2K8 898 aa11.74□□□□□ -0.53
SNHG1-215ENST00000540904 SMC4Q9NTJ3 1288 aa11.74□□□□□ -0.53
SNHG1-215ENST00000540904 SLX4Q8IY92 1834 aa11.74□□□□□ -0.53
SNHG1-215ENST00000540904 CHD4Q14839 1912 aa11.74□□□□□ -0.53
SNHG1-215ENST00000540904 PDE8AO60658 829 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 521.1 ms