RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 COPS6Q7L5N1 327 aa11.99□□□□□ -0.49
NUP85-203ENST00000540768 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
NUP85-203ENST00000540768 TTC14Q96N46 770 aa11.99□□□□□ -0.49
NUP85-203ENST00000540768 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
NUP85-203ENST00000540768 A0A0G2JS52 829 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 ONECUT3O60422 494 aaPredicted RBP11.98□□□□□ -0.49
NUP85-203ENST00000540768 SNRPA1P09661 255 aaKnown RBP11.98□□□□□ -0.49
NUP85-203ENST00000540768 ZNF445P59923 1031 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 AACSQ86V21 672 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 KCNB2Q92953 911 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 EAF2Q96CJ1 260 aaPredicted RBP11.98□□□□□ -0.49
NUP85-203ENST00000540768 GPATCH3Q96I76 525 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 RRAGDQ9NQL2 400 aaPredicted RBP11.98□□□□□ -0.49
NUP85-203ENST00000540768 BTG4Q9NY30 223 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 GLI3P10071 1580 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 PRPF40AO75400 957 aaKnown RBP11.98□□□□□ -0.49
NUP85-203ENST00000540768 NEXNQ0ZGT2 675 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 G3BP1Q13283 466 aaKnown RBP eCLIP11.98□□□□□ -0.49
NUP85-203ENST00000540768 EPHA10Q5JZY3 1008 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 NOL8Q76FK4 1167 aaKnown RBP11.98□□□□□ -0.49
NUP85-203ENST00000540768 GPT2Q8TD30 523 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 RUFY2Q8WXA3 655 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 EVI5LQ96CN4 794 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 CHAMP1Q96JM3 812 aa11.98□□□□□ -0.49
NUP85-203ENST00000540768 SF3B2Q13435 895 aaKnown RBP11.97□□□□□ -0.49
NUP85-203ENST00000540768 ANKRD13DQ6ZTN6 518 aa11.97□□□□□ -0.49
NUP85-203ENST00000540768 KIAA1211Q6ZU35 1233 aa11.97□□□□□ -0.49
NUP85-203ENST00000540768 MYD88Q99836 296 aa11.97□□□□□ -0.49
NUP85-203ENST00000540768 DIAPH3Q9NSV4 1193 aa11.97□□□□□ -0.49
NUP85-203ENST00000540768 PTH1RQ03431 593 aa11.96□□□□□ -0.49
NUP85-203ENST00000540768 KRT27Q7Z3Y8 459 aa11.96□□□□□ -0.49
NUP85-203ENST00000540768 DEFB132Q7Z7B7 95 aa11.96□□□□□ -0.49
NUP85-203ENST00000540768 FMNL2Q96PY5 1086 aa11.96□□□□□ -0.49
NUP85-203ENST00000540768 PARP4Q9UKK3 1724 aaKnown RBP11.96□□□□□ -0.49
NUP85-203ENST00000540768 COL15A1P39059 1388 aa11.96□□□□□ -0.5
NUP85-203ENST00000540768 FAM98CQ17RN3 349 aaKnown RBP11.96□□□□□ -0.5
NUP85-203ENST00000540768 ZSCAN23Q3MJ62 389 aa11.96□□□□□ -0.5
NUP85-203ENST00000540768 CAVIN1Q6NZI2 390 aaKnown RBP11.96□□□□□ -0.5
NUP85-203ENST00000540768 TTC5Q8N0Z6 440 aa11.96□□□□□ -0.5
NUP85-203ENST00000540768 CCDC8Q9H0W5 538 aaPredicted RBP11.96□□□□□ -0.5
NUP85-203ENST00000540768 SNRKQ9NRH2 765 aa11.96□□□□□ -0.5
NUP85-203ENST00000540768 RFX5P48382 616 aaPredicted RBP11.95□□□□□ -0.5
NUP85-203ENST00000540768 AK2P54819 239 aa11.95□□□□□ -0.5
NUP85-203ENST00000540768 FOXD4L5Q5VV16 416 aaPredicted RBP11.95□□□□□ -0.5
NUP85-203ENST00000540768 RUFY3Q7L099 469 aa11.95□□□□□ -0.5
NUP85-203ENST00000540768 KLHDC4Q8TBB5 520 aa11.95□□□□□ -0.5
NUP85-203ENST00000540768 FOXD4L4Q8WXT5 416 aaPredicted RBP11.95□□□□□ -0.5
NUP85-203ENST00000540768 TLR7Q9NYK1 1049 aaKnown RBP11.95□□□□□ -0.5
NUP85-203ENST00000540768 NCLP19338 710 aaKnown RBP11.94□□□□□ -0.5
NUP85-203ENST00000540768 PIP4K2AP48426 406 aaPredicted RBP11.94□□□□□ -0.5
NUP85-203ENST00000540768 CABP4P57796 275 aa11.94□□□□□ -0.5
NUP85-203ENST00000540768 RABL6Q3YEC7 729 aaPredicted RBP11.94□□□□□ -0.5
NUP85-203ENST00000540768 COPRSQ9NQ92 184 aa11.94□□□□□ -0.5
NUP85-203ENST00000540768 LIMCH1Q9UPQ0 1083 aa11.94□□□□□ -0.5
NUP85-203ENST00000540768 LAMB4A4D0S4 1761 aa11.94□□□□□ -0.5
NUP85-203ENST00000540768 ARFGEF2Q9Y6D5 1785 aa11.94□□□□□ -0.5
NUP85-203ENST00000540768 NECTIN1Q15223 517 aa11.94□□□□□ -0.5
NUP85-203ENST00000540768 TM6SF1Q9BZW5 370 aa11.94□□□□□ -0.5
NUP85-203ENST00000540768 SIL1Q9H173 461 aa11.94□□□□□ -0.5
NUP85-203ENST00000540768 PRDM11Q9NQV5 511 aa11.94□□□□□ -0.5
NUP85-203ENST00000540768 NSFL1CQ9UNZ2 370 aaKnown RBP11.94□□□□□ -0.5
NUP85-203ENST00000540768 RPAP1Q9BWH6 1393 aaPredicted RBP11.93□□□□□ -0.5
NUP85-203ENST00000540768 CCDC171Q6TFL3 1326 aa11.93□□□□□ -0.5
NUP85-203ENST00000540768 HIP1O00291 1037 aa11.93□□□□□ -0.5
NUP85-203ENST00000540768 CASP7P55210 303 aa11.93□□□□□ -0.5
NUP85-203ENST00000540768 ADCK5Q3MIX3 580 aa11.93□□□□□ -0.5
NUP85-203ENST00000540768 PRPF40BQ6NWY9 871 aaKnown RBP11.93□□□□□ -0.5
NUP85-203ENST00000540768 FAM227BQ96M60 508 aa11.93□□□□□ -0.5
NUP85-203ENST00000540768 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
NUP85-203ENST00000540768 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
NUP85-203ENST00000540768 AFDNP55196 1824 aaKnown RBP11.92□□□□□ -0.5
NUP85-203ENST00000540768 CPA1P15085 419 aa11.92□□□□□ -0.5
NUP85-203ENST00000540768 CASTP20810 708 aaKnown RBP11.92□□□□□ -0.5
NUP85-203ENST00000540768 PTPN12Q05209 780 aaKnown RBP11.92□□□□□ -0.5
NUP85-203ENST00000540768 NMIQ13287 307 aaPredicted RBP11.92□□□□□ -0.5
NUP85-203ENST00000540768 PLBD2Q8NHP8 589 aa11.92□□□□□ -0.5
NUP85-203ENST00000540768 MAP4K1Q92918 833 aa11.92□□□□□ -0.5
NUP85-203ENST00000540768 TMEM63CQ9P1W3 806 aa11.92□□□□□ -0.5
NUP85-203ENST00000540768 WDR33Q9C0J8 1336 aaKnown RBP11.92□□□□□ -0.5
NUP85-203ENST00000540768 NASPP49321 788 aaPredicted RBP11.92□□□□□ -0.5
NUP85-203ENST00000540768 VPS53Q5VIR6 699 aa11.92□□□□□ -0.5
NUP85-203ENST00000540768 JARID2Q92833 1246 aaPredicted RBP11.92□□□□□ -0.5
NUP85-203ENST00000540768 PPP1R9BQ96SB3 815 aa11.92□□□□□ -0.5
NUP85-203ENST00000540768 BOLA2Q9H3K6 86 aa11.92□□□□□ -0.5
NUP85-203ENST00000540768 ERBB4Q15303 1308 aa11.91□□□□□ -0.5
NUP85-203ENST00000540768 WDR17Q8IZU2 1322 aa11.91□□□□□ -0.5
NUP85-203ENST00000540768 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
NUP85-203ENST00000540768 MBD3O95983 291 aa11.91□□□□□ -0.5
NUP85-203ENST00000540768 FAM182BQ5T319 152 aa11.91□□□□□ -0.5
NUP85-203ENST00000540768 NBPF14Q5TI25 921 aa11.91□□□□□ -0.5
NUP85-203ENST00000540768 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
NUP85-203ENST00000540768 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
NUP85-203ENST00000540768 JAKMIP1Q96N16 626 aaKnown RBP11.91□□□□□ -0.5
NUP85-203ENST00000540768 RBM8AQ9Y5S9 174 aaKnown RBP11.91□□□□□ -0.5
NUP85-203ENST00000540768 MED23Q9ULK4 1368 aa11.91□□□□□ -0.5
NUP85-203ENST00000540768 UBR2Q8IWV8 1755 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 A0A0D9SFI3 127 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 ATP5J2-PTCD1G3V325 749 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 PTCD1O75127 700 aaKnown RBP11.9□□□□□ -0.5
NUP85-203ENST00000540768 LARGE1O95461 756 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms