RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 C9orf131Q5VYM1 1079 aa13.96□□□□□ -0.17
SLC3A2-215ENST00000539891 PRPF40BQ6NWY9 871 aaKnown RBP13.96□□□□□ -0.17
SLC3A2-215ENST00000539891 NLRP10Q86W26 655 aa13.96□□□□□ -0.17
SLC3A2-215ENST00000539891 C7orf43Q8WVR3 580 aa13.96□□□□□ -0.17
SLC3A2-215ENST00000539891 NFKBIEO00221 500 aa13.95□□□□□ -0.18
SLC3A2-215ENST00000539891 C21orf2O43822 256 aa13.95□□□□□ -0.18
SLC3A2-215ENST00000539891 ALDH1B1P30837 517 aa13.95□□□□□ -0.18
SLC3A2-215ENST00000539891 HOXA10P31260 410 aaPredicted RBP13.95□□□□□ -0.18
SLC3A2-215ENST00000539891 SOGA3Q5TF21 947 aa13.95□□□□□ -0.18
SLC3A2-215ENST00000539891 LTBP3Q9NS15 1303 aa13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 FANCIQ9NVI1 1328 aa13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 ZC3H4Q9UPT8 1303 aaKnown RBP13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 CCER2I3L3R5 266 aa13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 LMNB1P20700 586 aa13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 RASSF7Q02833 373 aa13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 TRIM28Q13263 835 aaKnown RBP13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 TWISTNBQ3B726 338 aaPredicted RBP13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 ISCA1Q9BUE6 129 aa13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 PHAXQ9H814 394 aaKnown RBP13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 GPBP1L1Q9HC44 474 aaPredicted RBP13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 RNF181Q9P0P0 153 aa13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 TIAM2Q8IVF5 1701 aa13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 DDX60Q8IY21 1712 aaKnown RBP13.94□□□□□ -0.18
SLC3A2-215ENST00000539891 PRELPP51888 382 aa13.93□□□□□ -0.18
SLC3A2-215ENST00000539891 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
SLC3A2-215ENST00000539891 NLRP3Q96P20 1036 aa13.93□□□□□ -0.18
SLC3A2-215ENST00000539891 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
SLC3A2-215ENST00000539891 ZNF521Q96K83 1311 aa13.93□□□□□ -0.18
SLC3A2-215ENST00000539891 RIC3Q7Z5B4 369 aa13.92□□□□□ -0.18
SLC3A2-215ENST00000539891 RPGRQ92834 1020 aaKnown RBP13.92□□□□□ -0.18
SLC3A2-215ENST00000539891 CRAMP1Q96RY5 1269 aa13.92□□□□□ -0.18
SLC3A2-215ENST00000539891 ZNF219Q9P2Y4 722 aaPredicted RBP13.92□□□□□ -0.18
SLC3A2-215ENST00000539891 TRMT112Q9UI30 125 aaKnown RBP13.92□□□□□ -0.18
SLC3A2-215ENST00000539891 DDX58O95786 925 aaKnown RBP13.91□□□□□ -0.18
SLC3A2-215ENST00000539891 CCDC93Q567U6 631 aa13.91□□□□□ -0.18
SLC3A2-215ENST00000539891 C3orf67Q6ZVT6 689 aa13.91□□□□□ -0.18
SLC3A2-215ENST00000539891 STK31Q9BXU1 1019 aa13.91□□□□□ -0.18
SLC3A2-215ENST00000539891 TAOK3Q9H2K8 898 aa13.91□□□□□ -0.18
SLC3A2-215ENST00000539891 MYH16Q9H6N6 1097 aa13.91□□□□□ -0.18
SLC3A2-215ENST00000539891 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
SLC3A2-215ENST00000539891 ATP5J2-PTCD1G3V325 749 aa13.9□□□□□ -0.18
SLC3A2-215ENST00000539891 VAMP4O75379 141 aa13.9□□□□□ -0.18
SLC3A2-215ENST00000539891 SNED1Q8TER0 1413 aa13.9□□□□□ -0.18
SLC3A2-215ENST00000539891 ZNF526Q8TF50 670 aaPredicted RBP13.9□□□□□ -0.18
SLC3A2-215ENST00000539891 RBM17Q96I25 401 aaKnown RBP13.9□□□□□ -0.18
SLC3A2-215ENST00000539891 TAF1P21675 1872 aa13.9□□□□□ -0.18
SLC3A2-215ENST00000539891 C1QTNF8P60827 252 aa13.9□□□□□ -0.19
SLC3A2-215ENST00000539891 EXOSC9Q06265 439 aaKnown RBP13.9□□□□□ -0.19
SLC3A2-215ENST00000539891 CC2D2BQ6DHV5 1058 aa13.9□□□□□ -0.19
SLC3A2-215ENST00000539891 KSR2Q6VAB6 950 aa13.9□□□□□ -0.19
SLC3A2-215ENST00000539891 RTKN2Q8IZC4 609 aa13.9□□□□□ -0.19
SLC3A2-215ENST00000539891 SYNE4Q8N205 404 aa13.9□□□□□ -0.19
SLC3A2-215ENST00000539891 METTL22Q9BUU2 404 aaPredicted RBP13.9□□□□□ -0.19
SLC3A2-215ENST00000539891 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
SLC3A2-215ENST00000539891 HCLS1P14317 486 aaPredicted RBP13.89□□□□□ -0.19
SLC3A2-215ENST00000539891 GRIPAP1Q4V328 841 aa13.89□□□□□ -0.19
SLC3A2-215ENST00000539891 KDM2BQ8NHM5 1336 aa13.88□□□□□ -0.19
SLC3A2-215ENST00000539891 KIF3CO14782 793 aa13.88□□□□□ -0.19
SLC3A2-215ENST00000539891 FKBP4Q02790 459 aaKnown RBP eCLIP13.88□□□□□ -0.19
SLC3A2-215ENST00000539891 CCDC191Q8NCU4 936 aa13.88□□□□□ -0.19
SLC3A2-215ENST00000539891 FAM89AQ96GI7 184 aa13.88□□□□□ -0.19
SLC3A2-215ENST00000539891 MYD88Q99836 296 aa13.88□□□□□ -0.19
SLC3A2-215ENST00000539891 MAP3K2Q9Y2U5 619 aa13.88□□□□□ -0.19
SLC3A2-215ENST00000539891 MYH3P11055 1940 aa13.88□□□□□ -0.19
SLC3A2-215ENST00000539891 ABCC4O15439 1325 aa13.87□□□□□ -0.19
SLC3A2-215ENST00000539891 PI4KAP2A4QPH2 592 aa13.87□□□□□ -0.19
SLC3A2-215ENST00000539891 GLTPD2A6NH11 291 aa13.87□□□□□ -0.19
SLC3A2-215ENST00000539891 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
SLC3A2-215ENST00000539891 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
SLC3A2-215ENST00000539891 OLFM4Q6UX06 510 aa13.87□□□□□ -0.19
SLC3A2-215ENST00000539891 G2E3Q7L622 706 aa13.87□□□□□ -0.19
SLC3A2-215ENST00000539891 PI4KAP1Q8N8J0 262 aa13.87□□□□□ -0.19
SLC3A2-215ENST00000539891 ZBTB38Q8NAP3 1195 aaPredicted RBP13.87□□□□□ -0.19
SLC3A2-215ENST00000539891 PSMD1Q99460 953 aa13.87□□□□□ -0.19
SLC3A2-215ENST00000539891 PPEF1O14829 653 aaPredicted RBP13.86□□□□□ -0.19
SLC3A2-215ENST00000539891 BBOX1O75936 387 aa13.86□□□□□ -0.19
SLC3A2-215ENST00000539891 PCCAP05165 728 aaPredicted RBP13.86□□□□□ -0.19
SLC3A2-215ENST00000539891 HSP90B1P14625 803 aaKnown RBP13.86□□□□□ -0.19
SLC3A2-215ENST00000539891 FLIIQ13045 1269 aa13.86□□□□□ -0.19
SLC3A2-215ENST00000539891 NMRK2Q9NPI5 230 aa13.86□□□□□ -0.19
SLC3A2-215ENST00000539891 CWC25Q9NXE8 425 aaPredicted RBP13.86□□□□□ -0.19
SLC3A2-215ENST00000539891 LRRC37AA6NMS7 1700 aa13.85□□□□□ -0.19
SLC3A2-215ENST00000539891 WDR90Q96KV7 1748 aa13.85□□□□□ -0.19
SLC3A2-215ENST00000539891 IRS4O14654 1257 aaPredicted RBP13.85□□□□□ -0.19
SLC3A2-215ENST00000539891 IGKV5-2P06315 115 aa13.85□□□□□ -0.19
SLC3A2-215ENST00000539891 DDX46Q7L014 1031 aaKnown RBP13.85□□□□□ -0.19
SLC3A2-215ENST00000539891 ZNF428Q96B54 188 aa13.85□□□□□ -0.19
SLC3A2-215ENST00000539891 ATP6V0A2Q9Y487 856 aa13.85□□□□□ -0.19
SLC3A2-215ENST00000539891 E9PSI1 815 aa13.84□□□□□ -0.19
SLC3A2-215ENST00000539891 NEXNQ0ZGT2 675 aa13.84□□□□□ -0.19
SLC3A2-215ENST00000539891 GRAPQ13588 217 aa13.84□□□□□ -0.19
SLC3A2-215ENST00000539891 DIEXFQ68CQ4 756 aaKnown RBP13.84□□□□□ -0.19
SLC3A2-215ENST00000539891 DPY19L2Q6NUT2 758 aa13.84□□□□□ -0.19
SLC3A2-215ENST00000539891 TMC4Q7Z404 712 aa13.84□□□□□ -0.19
SLC3A2-215ENST00000539891 GRAPLQ8TC17 118 aaPredicted RBP13.84□□□□□ -0.19
SLC3A2-215ENST00000539891 CDHR2Q9BYE9 1310 aa13.83□□□□□ -0.19
SLC3A2-215ENST00000539891 SLFN5Q08AF3 891 aa13.83□□□□□ -0.2
SLC3A2-215ENST00000539891 RTL5Q5HYW3 569 aaPredicted RBP13.83□□□□□ -0.2
SLC3A2-215ENST00000539891 SP8Q8IXZ3 490 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms