RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 MYBBP1AQ9BQG0 1328 aaKnown RBP22.68■■□□□ 1.22
PDCD2-207ENST00000539212 NEUROD2Q15784 382 aa22.68■■□□□ 1.22
PDCD2-207ENST00000539212 KRT24Q2M2I5 525 aa22.68■■□□□ 1.22
PDCD2-207ENST00000539212 GIGYF2Q6Y7W6 1299 aaKnown RBP22.68■■□□□ 1.22
PDCD2-207ENST00000539212 RTKN2Q8IZC4 609 aa22.68■■□□□ 1.22
PDCD2-207ENST00000539212 SYNE4Q8N205 404 aa22.68■■□□□ 1.22
PDCD2-207ENST00000539212 TAF1P21675 1872 aa22.68■■□□□ 1.22
PDCD2-207ENST00000539212 LTBP1Q14766 1721 aa22.68■■□□□ 1.22
PDCD2-207ENST00000539212 IARSP41252 1262 aaKnown RBP22.67■■□□□ 1.22
PDCD2-207ENST00000539212 RPGRQ92834 1020 aaKnown RBP22.67■■□□□ 1.22
PDCD2-207ENST00000539212 TCERG1O14776 1098 aaKnown RBP22.66■■□□□ 1.22
PDCD2-207ENST00000539212 L3MBTL3Q96JM7 780 aaPredicted RBP22.66■■□□□ 1.22
PDCD2-207ENST00000539212 TAF1DQ9H5J8 278 aaPredicted RBP22.66■■□□□ 1.22
PDCD2-207ENST00000539212 RNF123Q5XPI4 1314 aa22.64■■□□□ 1.22
PDCD2-207ENST00000539212 HOXA10P31260 410 aaPredicted RBP22.64■■□□□ 1.21
PDCD2-207ENST00000539212 DDX60Q8IY21 1712 aaKnown RBP22.63■■□□□ 1.21
PDCD2-207ENST00000539212 IQCA1LA6NCM1 817 aa22.63■■□□□ 1.21
PDCD2-207ENST00000539212 LMOD3Q0VAK6 560 aa22.63■■□□□ 1.21
PDCD2-207ENST00000539212 COL13A1Q5TAT6 717 aaPredicted RBP22.63■■□□□ 1.21
PDCD2-207ENST00000539212 ZNF428Q96B54 188 aa22.63■■□□□ 1.21
PDCD2-207ENST00000539212 FZD9O00144 591 aa22.62■■□□□ 1.21
PDCD2-207ENST00000539212 PPEF1O14829 653 aaPredicted RBP22.62■■□□□ 1.21
PDCD2-207ENST00000539212 AIMP1Q12904 312 aaKnown RBP22.62■■□□□ 1.21
PDCD2-207ENST00000539212 EAPPQ56P03 285 aaPredicted RBP22.62■■□□□ 1.21
PDCD2-207ENST00000539212 XAGE3Q8WTP9 111 aa22.62■■□□□ 1.21
PDCD2-207ENST00000539212 PSMD1Q99460 953 aa22.62■■□□□ 1.21
PDCD2-207ENST00000539212 TRIM35Q9UPQ4 493 aa22.62■■□□□ 1.21
PDCD2-207ENST00000539212 LAS1LQ9Y4W2 734 aaKnown RBP22.62■■□□□ 1.21
PDCD2-207ENST00000539212 PPP1R42Q7Z4L9 355 aa22.61■■□□□ 1.21
PDCD2-207ENST00000539212 LDHDQ86WU2 507 aa22.61■■□□□ 1.21
PDCD2-207ENST00000539212 RBM17Q96I25 401 aaKnown RBP22.61■■□□□ 1.21
PDCD2-207ENST00000539212 BABAM1Q9NWV8 329 aa22.61■■□□□ 1.21
PDCD2-207ENST00000539212 MKRN1Q9UHC7 482 aaKnown RBP22.61■■□□□ 1.21
PDCD2-207ENST00000539212 HSPA1AP0DMV8 641 aaKnown RBP22.6■■□□□ 1.21
PDCD2-207ENST00000539212 HSPA1BP0DMV9 641 aaKnown RBP22.6■■□□□ 1.21
PDCD2-207ENST00000539212 PARP10Q53GL7 1025 aa22.6■■□□□ 1.21
PDCD2-207ENST00000539212 COPS6Q7L5N1 327 aa22.6■■□□□ 1.21
PDCD2-207ENST00000539212 UTP14AQ9BVJ6 771 aaKnown RBP22.6■■□□□ 1.21
PDCD2-207ENST00000539212 HACL1Q9UJ83 578 aa22.6■■□□□ 1.21
PDCD2-207ENST00000539212 PASKQ96RG2 1323 aa22.59■■□□□ 1.21
PDCD2-207ENST00000539212 EPHX2P34913 555 aa22.59■■□□□ 1.21
PDCD2-207ENST00000539212 WDR43Q15061 677 aaKnown RBP eCLIP22.59■■□□□ 1.21
PDCD2-207ENST00000539212 RUNDC1Q96C34 613 aa22.59■■□□□ 1.21
PDCD2-207ENST00000539212 CRAMP1Q96RY5 1269 aa22.59■■□□□ 1.21
PDCD2-207ENST00000539212 CREBZFQ9NS37 354 aa22.59■■□□□ 1.21
PDCD2-207ENST00000539212 ABCC4O15439 1325 aa22.58■■□□□ 1.21
PDCD2-207ENST00000539212 CHL1O00533 1208 aa22.58■■□□□ 1.21
PDCD2-207ENST00000539212 GJA3Q9Y6H8 435 aa22.58■■□□□ 1.21
PDCD2-207ENST00000539212 CC2D2BQ6DHV5 1058 aa22.57■■□□□ 1.2
PDCD2-207ENST00000539212 NLRP10Q86W26 655 aa22.57■■□□□ 1.2
PDCD2-207ENST00000539212 GPC2Q8N158 579 aa22.57■■□□□ 1.2
PDCD2-207ENST00000539212 JDP2Q8WYK2 163 aa22.57■■□□□ 1.2
PDCD2-207ENST00000539212 NLRP3Q96P20 1036 aa22.57■■□□□ 1.2
PDCD2-207ENST00000539212 CHPF2Q9P2E5 772 aa22.57■■□□□ 1.2
PDCD2-207ENST00000539212 ADAMTS8Q9UP79 889 aa22.57■■□□□ 1.2
PDCD2-207ENST00000539212 CLEC11AQ9Y240 323 aa22.57■■□□□ 1.2
PDCD2-207ENST00000539212 COL4A1P02462 1669 aa22.56■■□□□ 1.2
PDCD2-207ENST00000539212 HCLS1P14317 486 aaPredicted RBP22.56■■□□□ 1.2
PDCD2-207ENST00000539212 LARGE2Q8N3Y3 721 aa22.56■■□□□ 1.2
PDCD2-207ENST00000539212 LRRC37AA6NMS7 1700 aa22.55■■□□□ 1.2
PDCD2-207ENST00000539212 ITGBL1O95965 494 aaPredicted RBP22.55■■□□□ 1.2
PDCD2-207ENST00000539212 SLC10A5Q5PT55 438 aa22.55■■□□□ 1.2
PDCD2-207ENST00000539212 MAP1SQ66K74 1059 aaPredicted RBP22.55■■□□□ 1.2
PDCD2-207ENST00000539212 DDX21Q9NR30 783 aaKnown RBP eCLIP22.55■■□□□ 1.2
PDCD2-207ENST00000539212 EIF6P56537 245 aaKnown RBP22.54■■□□□ 1.2
PDCD2-207ENST00000539212 CNTNAP1P78357 1384 aa22.53■■□□□ 1.2
PDCD2-207ENST00000539212 TCIRG1Q13488 830 aa22.53■■□□□ 1.2
PDCD2-207ENST00000539212 AOC3Q16853 763 aa22.53■■□□□ 1.2
PDCD2-207ENST00000539212 HDGFL1Q5TGJ6 251 aa22.53■■□□□ 1.2
PDCD2-207ENST00000539212 ATP6V0A2Q9Y487 856 aa22.53■■□□□ 1.2
PDCD2-207ENST00000539212 DUOX1Q9NRD9 1551 aa22.53■■□□□ 1.2
PDCD2-207ENST00000539212 PPIP5K2O43314 1243 aa22.52■■□□□ 1.2
PDCD2-207ENST00000539212 SCNN1DP51172 638 aa22.52■■□□□ 1.2
PDCD2-207ENST00000539212 HSP90AB3PQ58FF7 597 aa22.52■■□□□ 1.2
PDCD2-207ENST00000539212 TRMT112Q9UI30 125 aaKnown RBP22.52■■□□□ 1.2
PDCD2-207ENST00000539212 NIM1KQ8IY84 436 aa22.51■■□□□ 1.19
PDCD2-207ENST00000539212 TRPM7Q96QT4 1865 aa22.5■■□□□ 1.19
PDCD2-207ENST00000539212 EPS15P42566 896 aa22.5■■□□□ 1.19
PDCD2-207ENST00000539212 PNMA8AQ86V59 439 aaPredicted RBP22.5■■□□□ 1.19
PDCD2-207ENST00000539212 PRKRIP1Q9H875 184 aaPredicted RBP22.5■■□□□ 1.19
PDCD2-207ENST00000539212 SH3TC1Q8TE82 1336 aa22.5■■□□□ 1.19
PDCD2-207ENST00000539212 TMEM88BA6NKF7 163 aa22.49■■□□□ 1.19
PDCD2-207ENST00000539212 FMR1Q06787 632 aaKnown RBP eCLIP22.49■■□□□ 1.194e-6■■■□□ 17.2
PDCD2-207ENST00000539212 GRIPAP1Q4V328 841 aa22.49■■□□□ 1.19
PDCD2-207ENST00000539212 CNTROBQ8N137 903 aa22.49■■□□□ 1.19
PDCD2-207ENST00000539212 MBIPQ9NS73 344 aa22.49■■□□□ 1.19
PDCD2-207ENST00000539212 ATP5J2-PTCD1G3V325 749 aa22.48■■□□□ 1.19
PDCD2-207ENST00000539212 CAPN15O75808 1086 aa22.48■■□□□ 1.19
PDCD2-207ENST00000539212 LMOD1P29536 600 aaPredicted RBP22.48■■□□□ 1.19
PDCD2-207ENST00000539212 TNS4Q8IZW8 715 aa22.48■■□□□ 1.19
PDCD2-207ENST00000539212 DUSP27Q5VZP5 1158 aa22.47■■□□□ 1.19
PDCD2-207ENST00000539212 PLBD2Q8NHP8 589 aa22.47■■□□□ 1.19
PDCD2-207ENST00000539212 CFAP44Q96MT7 982 aa22.47■■□□□ 1.19
PDCD2-207ENST00000539212 VEGFBP49765 207 aa22.46■■□□□ 1.19
PDCD2-207ENST00000539212 GRAPQ13588 217 aa22.46■■□□□ 1.19
PDCD2-207ENST00000539212 RTL5Q5HYW3 569 aaPredicted RBP22.46■■□□□ 1.19
PDCD2-207ENST00000539212 DPP8Q6V1X1 898 aaPredicted RBP22.46■■□□□ 1.19
PDCD2-207ENST00000539212 DDX46Q7L014 1031 aaKnown RBP22.46■■□□□ 1.19
PDCD2-207ENST00000539212 GRAPLQ8TC17 118 aaPredicted RBP22.46■■□□□ 1.19
PDCD2-207ENST00000539212 TMX4Q9H1E5 349 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms