RNA–Protein interactions for RNA: ENST00000536144.1

MRE11-206, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 3

Gene MRE11, Length 619 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-206ENST00000536144 NBR1Q14596 966 aa11.76□□□□□ -0.53
MRE11-206ENST00000536144 DNAJC10Q8IXB1 793 aa11.76□□□□□ -0.53
MRE11-206ENST00000536144 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
MRE11-206ENST00000536144 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
MRE11-206ENST00000536144 PNPLA7Q6ZV29 1317 aa11.76□□□□□ -0.53
MRE11-206ENST00000536144 GNPATO15228 680 aa11.75□□□□□ -0.53
MRE11-206ENST00000536144 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
MRE11-206ENST00000536144 CRKLP46109 303 aaKnown RBP11.75□□□□□ -0.53
MRE11-206ENST00000536144 EIF4A1P60842 406 aaKnown RBP11.75□□□□□ -0.53
MRE11-206ENST00000536144 LSM11P83369 360 aaKnown RBP eCLIP11.75□□□□□ -0.53
MRE11-206ENST00000536144 INTS5Q6P9B9 1019 aaKnown RBP11.75□□□□□ -0.53
MRE11-206ENST00000536144 COL23A1Q86Y22 540 aaPredicted RBP11.75□□□□□ -0.53
MRE11-206ENST00000536144 PDGFDQ9GZP0 370 aaPredicted RBP11.75□□□□□ -0.53
MRE11-206ENST00000536144 TSPYL4Q9UJ04 414 aa11.75□□□□□ -0.53
MRE11-206ENST00000536144 RTCBQ9Y3I0 505 aaKnown RBP11.75□□□□□ -0.53
MRE11-206ENST00000536144 SIPA1L3O60292 1781 aaPredicted RBP11.74□□□□□ -0.53
MRE11-206ENST00000536144 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
MRE11-206ENST00000536144 TRAPPC3LQ5T215 181 aa11.74□□□□□ -0.53
MRE11-206ENST00000536144 WWC1Q8IX03 1113 aa11.74□□□□□ -0.53
MRE11-206ENST00000536144 MTFR1LQ9H019 292 aa11.74□□□□□ -0.53
MRE11-206ENST00000536144 CCDC87Q9NVE4 849 aa11.74□□□□□ -0.53
MRE11-206ENST00000536144 CICQ96RK0 1608 aaPredicted RBP11.74□□□□□ -0.53
MRE11-206ENST00000536144 C5P01031 1676 aa11.74□□□□□ -0.53
MRE11-206ENST00000536144 C4BP0C0L5 1744 aa11.74□□□□□ -0.53
MRE11-206ENST00000536144 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
MRE11-206ENST00000536144 GIGYF1O75420 1035 aaPredicted RBP11.73□□□□□ -0.53
MRE11-206ENST00000536144 DMRTA1Q5VZB9 504 aa11.73□□□□□ -0.53
MRE11-206ENST00000536144 AMIGO3Q86WK7 504 aa11.73□□□□□ -0.53
MRE11-206ENST00000536144 SPON1Q9HCB6 807 aa11.73□□□□□ -0.53
MRE11-206ENST00000536144 IFT57Q9NWB7 429 aa11.73□□□□□ -0.53
MRE11-206ENST00000536144 DLG5Q8TDM6 1919 aa11.72□□□□□ -0.53
MRE11-206ENST00000536144 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
MRE11-206ENST00000536144 SRCAPQ6ZRS2 3230 aa11.72□□□□□ -0.53
MRE11-206ENST00000536144 IL16Q14005 1332 aa11.72□□□□□ -0.53
MRE11-206ENST00000536144 GNAI1P63096 354 aa11.72□□□□□ -0.53
MRE11-206ENST00000536144 USP16Q9Y5T5 823 aa11.72□□□□□ -0.53
MRE11-206ENST00000536144 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
MRE11-206ENST00000536144 ZBTB7AO95365 584 aa11.71□□□□□ -0.53
MRE11-206ENST00000536144 SPNS2Q8IVW8 549 aa11.71□□□□□ -0.53
MRE11-206ENST00000536144 WDR63Q8IWG1 891 aa11.71□□□□□ -0.53
MRE11-206ENST00000536144 LAS1LQ9Y4W2 734 aaKnown RBP11.71□□□□□ -0.53
MRE11-206ENST00000536144 VIRMAQ69YN4 1812 aaKnown RBP11.71□□□□□ -0.54
MRE11-206ENST00000536144 TAF1LQ8IZX4 1826 aa11.71□□□□□ -0.54
MRE11-206ENST00000536144 PRAMEF22A3QJZ6 481 aa11.7□□□□□ -0.54
MRE11-206ENST00000536144 MAP3K7O43318 606 aa11.7□□□□□ -0.54
MRE11-206ENST00000536144 A1BGP04217 495 aa11.7□□□□□ -0.54
MRE11-206ENST00000536144 RFC4P35249 363 aa11.7□□□□□ -0.54
MRE11-206ENST00000536144 IL6STP40189 918 aaPredicted RBP11.7□□□□□ -0.54
MRE11-206ENST00000536144 EIF5P55010 431 aaKnown RBP11.7□□□□□ -0.54
MRE11-206ENST00000536144 SMIM5Q71RC9 77 aa11.7□□□□□ -0.54
MRE11-206ENST00000536144 MBIPQ9NS73 344 aa11.7□□□□□ -0.54
MRE11-206ENST00000536144 ZBTB1Q9Y2K1 713 aa11.7□□□□□ -0.54
MRE11-206ENST00000536144 CASZ1Q86V15 1759 aa11.69□□□□□ -0.54
MRE11-206ENST00000536144 COL5A3P25940 1745 aaPredicted RBP11.69□□□□□ -0.54
MRE11-206ENST00000536144 TJP1Q07157 1748 aa11.69□□□□□ -0.54
MRE11-206ENST00000536144 QSER1Q2KHR3 1735 aa11.69□□□□□ -0.54
MRE11-206ENST00000536144 SEMA3EO15041 775 aa11.69□□□□□ -0.54
MRE11-206ENST00000536144 HOXB7P09629 217 aa11.69□□□□□ -0.54
MRE11-206ENST00000536144 MLLT3P42568 568 aaPredicted RBP11.69□□□□□ -0.54
MRE11-206ENST00000536144 C6orf132Q5T0Z8 1188 aa11.69□□□□□ -0.54
MRE11-206ENST00000536144 A0A087WZG4 1122 aa11.68□□□□□ -0.54
MRE11-206ENST00000536144 CANXP27824 592 aaKnown RBP11.68□□□□□ -0.54
MRE11-206ENST00000536144 NLGN1Q8N2Q7 840 aa11.68□□□□□ -0.54
MRE11-206ENST00000536144 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
MRE11-206ENST00000536144 ERBB4Q15303 1308 aa11.67□□□□□ -0.54
MRE11-206ENST00000536144 ZNF521Q96K83 1311 aa11.67□□□□□ -0.54
MRE11-206ENST00000536144 SENP3-EIF4A1A0A087X0R7 540 aa11.67□□□□□ -0.54
MRE11-206ENST00000536144 POLD1P28340 1107 aa11.67□□□□□ -0.54
MRE11-206ENST00000536144 NARFQ9UHQ1 456 aa11.67□□□□□ -0.54
MRE11-206ENST00000536144 SALL2Q9Y467 1007 aaPredicted RBP11.67□□□□□ -0.54
MRE11-206ENST00000536144 COL15A1P39059 1388 aa11.67□□□□□ -0.54
MRE11-206ENST00000536144 USP42Q9H9J4 1324 aaKnown RBP11.66□□□□□ -0.54
MRE11-206ENST00000536144 UBR3Q6ZT12 1888 aa11.66□□□□□ -0.54
MRE11-206ENST00000536144 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
MRE11-206ENST00000536144 ZPR1O75312 459 aa11.66□□□□□ -0.54
MRE11-206ENST00000536144 GYS1P13807 737 aa11.66□□□□□ -0.54
MRE11-206ENST00000536144 OSBPP22059 807 aa11.66□□□□□ -0.54
MRE11-206ENST00000536144 NBPF10Q6P3W6 841 aaKnown RBP11.66□□□□□ -0.54
MRE11-206ENST00000536144 ADGRD1Q6QNK2 874 aa11.66□□□□□ -0.54
MRE11-206ENST00000536144 NPM2Q86SE8 214 aaKnown RBP11.66□□□□□ -0.54
MRE11-206ENST00000536144 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
MRE11-206ENST00000536144 CHMP4AQ9BY43 222 aa11.66□□□□□ -0.54
MRE11-206ENST00000536144 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.54
MRE11-206ENST00000536144 LRP5O75197 1615 aa11.65□□□□□ -0.54
MRE11-206ENST00000536144 KRT24Q2M2I5 525 aa11.65□□□□□ -0.54
MRE11-206ENST00000536144 DUSP27Q5VZP5 1158 aa11.65□□□□□ -0.54
MRE11-206ENST00000536144 TK2O00142 265 aa11.64□□□□□ -0.55
MRE11-206ENST00000536144 EIF2S2P20042 333 aaKnown RBP11.64□□□□□ -0.55
MRE11-206ENST00000536144 COL9A1P20849 921 aa11.64□□□□□ -0.55
MRE11-206ENST00000536144 TSR1Q2NL82 804 aaKnown RBP11.64□□□□□ -0.55
MRE11-206ENST00000536144 MSL1Q68DK7 614 aa11.64□□□□□ -0.55
MRE11-206ENST00000536144 ARXQ96QS3 562 aa11.64□□□□□ -0.55
MRE11-206ENST00000536144 SRP68Q9UHB9 627 aaKnown RBP11.64□□□□□ -0.55
MRE11-206ENST00000536144 TUBGCP6Q96RT7 1819 aa11.63□□□□□ -0.55
MRE11-206ENST00000536144 PPP1R3GB7ZBB8 358 aa11.63□□□□□ -0.55
MRE11-206ENST00000536144 TM4SF1P30408 202 aa11.63□□□□□ -0.55
MRE11-206ENST00000536144 PIP4K2AP48426 406 aaPredicted RBP11.63□□□□□ -0.55
MRE11-206ENST00000536144 USPL1Q5W0Q7 1092 aa11.63□□□□□ -0.55
MRE11-206ENST00000536144 LRP10Q7Z4F1 713 aa11.63□□□□□ -0.55
MRE11-206ENST00000536144 C8orf58Q8NAV2 365 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms