RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 USP17L12C9JPN9 530 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 USP17L11C9JVI0 530 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 USP17L21D6R901 530 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 USP17L18D6R9N7 530 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 USP17L22D6RA61 530 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 USP17L17D6RBQ6 530 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 USP17L19D6RCP7 530 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 USP17L20D6RJB6 530 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 ADH7P40394 386 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 USP17L24Q0WX57 530 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 BTLAQ7Z6A9 289 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 STARD13Q9Y3M8 1113 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 M0R082 166 aa10.27□□□□□ -0.77
VBP1-203ENST00000535916 FURINP09958 794 aa10.27□□□□□ -0.77
VBP1-203ENST00000535916 LMOD1P29536 600 aaPredicted RBP10.27□□□□□ -0.77
VBP1-203ENST00000535916 NEUROD1Q13562 356 aa10.27□□□□□ -0.77
VBP1-203ENST00000535916 LCE3BQ5TA77 95 aa10.27□□□□□ -0.77
VBP1-203ENST00000535916 ZNF417Q8TAU3 575 aa10.27□□□□□ -0.77
VBP1-203ENST00000535916 ZNF587Q96SQ5 575 aaPredicted RBP10.27□□□□□ -0.77
VBP1-203ENST00000535916 FAM196BA6NMK8 535 aa10.26□□□□□ -0.77
VBP1-203ENST00000535916 ALBP02768 609 aa10.26□□□□□ -0.77
VBP1-203ENST00000535916 ANKMY2Q8IV38 441 aa10.26□□□□□ -0.77
VBP1-203ENST00000535916 COL9A3Q14050 684 aaPredicted RBP10.25□□□□□ -0.77
VBP1-203ENST00000535916 C8orf86Q6ZUL3 223 aa10.25□□□□□ -0.77
VBP1-203ENST00000535916 BHMTQ93088 406 aa10.25□□□□□ -0.77
VBP1-203ENST00000535916 VRTNQ9H8Y1 702 aa10.25□□□□□ -0.77
VBP1-203ENST00000535916 SPATA31C1P0DKV0 1188 aa10.24□□□□□ -0.77
VBP1-203ENST00000535916 IGFBP4P22692 258 aa10.24□□□□□ -0.77
VBP1-203ENST00000535916 HIF1AQ16665 826 aa10.24□□□□□ -0.77
VBP1-203ENST00000535916 RTN1Q16799 776 aa10.24□□□□□ -0.77
VBP1-203ENST00000535916 MICALL1Q8N3F8 863 aa10.24□□□□□ -0.77
VBP1-203ENST00000535916 ARXQ96QS3 562 aa10.23□□□□□ -0.77
VBP1-203ENST00000535916 TBC1D8BQ0IIM8 1120 aa10.22□□□□□ -0.77
VBP1-203ENST00000535916 PRDM6Q9NQX0 595 aa10.22□□□□□ -0.77
VBP1-203ENST00000535916 BCS1LQ9Y276 419 aa10.22□□□□□ -0.77
VBP1-203ENST00000535916 SPDYE3A6NKU9 549 aa10.21□□□□□ -0.77
VBP1-203ENST00000535916 FAM229AH3BQW9 127 aa10.21□□□□□ -0.77
VBP1-203ENST00000535916 TGFBR3LH3BV60 316 aa10.21□□□□□ -0.77
VBP1-203ENST00000535916 CFAP70Q5T0N1 1121 aa10.21□□□□□ -0.77
VBP1-203ENST00000535916 IER5Q5VY09 327 aa10.21□□□□□ -0.77
VBP1-203ENST00000535916 PRRT3Q5FWE3 981 aa10.2□□□□□ -0.78
VBP1-203ENST00000535916 C20orf204Q6ZNR8 217 aa10.2□□□□□ -0.78
VBP1-203ENST00000535916 UBE2OQ9C0C9 1292 aaKnown RBP10.2□□□□□ -0.78
VBP1-203ENST00000535916 DMGDHQ9UI17 866 aaKnown RBP10.2□□□□□ -0.78
VBP1-203ENST00000535916 ZNF777Q9ULD5 760 aaPredicted RBP10.2□□□□□ -0.78
VBP1-203ENST00000535916 NID1P14543 1247 aa10.19□□□□□ -0.78
VBP1-203ENST00000535916 GSX2Q9BZM3 304 aa10.19□□□□□ -0.78
VBP1-203ENST00000535916 IGFLR1Q9H665 355 aa10.19□□□□□ -0.78
VBP1-203ENST00000535916 KLK14Q9P0G3 267 aa10.19□□□□□ -0.78
VBP1-203ENST00000535916 SLC6A14Q9UN76 642 aa10.19□□□□□ -0.78
VBP1-203ENST00000535916 GRNP28799 593 aaKnown RBP10.18□□□□□ -0.78
VBP1-203ENST00000535916 DOC2BQ14184 412 aa10.18□□□□□ -0.78
VBP1-203ENST00000535916 WEE1P30291 646 aa10.17□□□□□ -0.78
VBP1-203ENST00000535916 GATA4P43694 442 aa10.17□□□□□ -0.78
VBP1-203ENST00000535916 CDCA8Q53HL2 280 aa10.17□□□□□ -0.78
VBP1-203ENST00000535916 QTRT2Q9H974 415 aaKnown RBP10.17□□□□□ -0.78
VBP1-203ENST00000535916 NFKB1P19838 968 aa10.16□□□□□ -0.78
VBP1-203ENST00000535916 DGKZQ13574 1117 aa10.16□□□□□ -0.78
VBP1-203ENST00000535916 PNMA5Q96PV4 448 aa10.16□□□□□ -0.78
VBP1-203ENST00000535916 DNAJB12Q9NXW2 375 aaKnown RBP10.16□□□□□ -0.78
VBP1-203ENST00000535916 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.16□□□□□ -0.78
VBP1-203ENST00000535916 LILRB5O75023 590 aa10.15□□□□□ -0.78
VBP1-203ENST00000535916 APBA3O96018 575 aa10.15□□□□□ -0.78
VBP1-203ENST00000535916 IDH3AP50213 366 aa10.15□□□□□ -0.78
VBP1-203ENST00000535916 CCINQ13939 588 aa10.15□□□□□ -0.78
VBP1-203ENST00000535916 EFCC1Q9HA90 598 aa10.15□□□□□ -0.78
VBP1-203ENST00000535916 BTBD11A6QL63 1104 aa10.14□□□□□ -0.79
VBP1-203ENST00000535916 FOXO3O43524 673 aa10.14□□□□□ -0.79
VBP1-203ENST00000535916 INPP5BP32019 993 aa10.14□□□□□ -0.79
VBP1-203ENST00000535916 TRIM28Q13263 835 aaKnown RBP10.14□□□□□ -0.79
VBP1-203ENST00000535916 FAM200AQ8TCP9 573 aa10.14□□□□□ -0.79
VBP1-203ENST00000535916 NUDT8Q8WV74 236 aa10.14□□□□□ -0.79
VBP1-203ENST00000535916 NAGPAQ9UK23 515 aa10.14□□□□□ -0.79
VBP1-203ENST00000535916 EPB42P16452 691 aa10.13□□□□□ -0.79
VBP1-203ENST00000535916 RFX1P22670 979 aa10.13□□□□□ -0.79
VBP1-203ENST00000535916 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
VBP1-203ENST00000535916 VTI1AQ96AJ9 217 aa10.13□□□□□ -0.79
VBP1-203ENST00000535916 JPH1Q9HDC5 661 aaPredicted RBP10.13□□□□□ -0.79
VBP1-203ENST00000535916 ITGB7P26010 798 aa10.12□□□□□ -0.79
VBP1-203ENST00000535916 GRIK4Q16099 956 aa10.12□□□□□ -0.79
VBP1-203ENST00000535916 ARSDP51689 593 aa10.11□□□□□ -0.79
VBP1-203ENST00000535916 PSAPL1Q6NUJ1 521 aa10.11□□□□□ -0.79
VBP1-203ENST00000535916 MYO19Q96H55 970 aa10.11□□□□□ -0.79
VBP1-203ENST00000535916 NOVA2Q9UNW9 492 aaKnown RBP10.11□□□□□ -0.79
VBP1-203ENST00000535916 MICAL2O94851 1124 aa10.1□□□□□ -0.79
VBP1-203ENST00000535916 KRT25Q7Z3Z0 450 aa10.1□□□□□ -0.79
VBP1-203ENST00000535916 KRTAP4-12Q9BQ66 201 aa10.1□□□□□ -0.79
VBP1-203ENST00000535916 SEMA6BQ9H3T3 888 aa10.1□□□□□ -0.79
VBP1-203ENST00000535916 ZFATQ9P243 1243 aa10.1□□□□□ -0.79
VBP1-203ENST00000535916 A0A0A0MRY4 1105 aa10.09□□□□□ -0.79
VBP1-203ENST00000535916 AFF1P51825 1210 aaKnown RBP10.09□□□□□ -0.79
VBP1-203ENST00000535916 C11orf91Q3C1V1 193 aa10.09□□□□□ -0.79
VBP1-203ENST00000535916 NACC1Q96RE7 527 aa10.09□□□□□ -0.79
VBP1-203ENST00000535916 TPSG1Q9NRR2 321 aa10.09□□□□□ -0.79
VBP1-203ENST00000535916 LRFN2Q9ULH4 789 aa10.09□□□□□ -0.79
VBP1-203ENST00000535916 MAP3K6O95382 1288 aa10.08□□□□□ -0.8
VBP1-203ENST00000535916 TARSP26639 723 aaKnown RBP10.08□□□□□ -0.8
VBP1-203ENST00000535916 FKBP5Q13451 457 aaPredicted RBP10.08□□□□□ -0.8
VBP1-203ENST00000535916 RSPO4Q2I0M5 234 aaPredicted RBP10.08□□□□□ -0.8
VBP1-203ENST00000535916 USP20Q9Y2K6 914 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms