RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 DDX21Q9NR30 783 aaKnown RBP eCLIP11.11□□□□□ -0.63
SFSWAP-202ENST00000535202 CHPF2Q9P2E5 772 aa11.11□□□□□ -0.63
SFSWAP-202ENST00000535202 RIC1Q4ADV7 1423 aa11.1□□□□□ -0.63
SFSWAP-202ENST00000535202 WDR90Q96KV7 1748 aa11.1□□□□□ -0.63
SFSWAP-202ENST00000535202 FKBP4Q02790 459 aaKnown RBP eCLIP11.1□□□□□ -0.63
SFSWAP-202ENST00000535202 CRY2Q49AN0 593 aa11.1□□□□□ -0.63
SFSWAP-202ENST00000535202 CCDC184Q52MB2 194 aa11.1□□□□□ -0.63
SFSWAP-202ENST00000535202 HSP90AB3PQ58FF7 597 aa11.1□□□□□ -0.63
SFSWAP-202ENST00000535202 HDGFL1Q5TGJ6 251 aa11.1□□□□□ -0.63
SFSWAP-202ENST00000535202 DPY19L2Q6NUT2 758 aa11.1□□□□□ -0.63
SFSWAP-202ENST00000535202 UTP14AQ9BVJ6 771 aaKnown RBP11.1□□□□□ -0.63
SFSWAP-202ENST00000535202 MBIPQ9NS73 344 aa11.1□□□□□ -0.63
SFSWAP-202ENST00000535202 VEGFAP15692 232 aaPredicted RBP11.09□□□□□ -0.63
SFSWAP-202ENST00000535202 APLP1P51693 650 aa11.09□□□□□ -0.63
SFSWAP-202ENST00000535202 ZNF277Q9NRM2 450 aaPredicted RBP11.09□□□□□ -0.63
SFSWAP-202ENST00000535202 LAMB2P55268 1798 aa11.08□□□□□ -0.64
SFSWAP-202ENST00000535202 HOXB7P09629 217 aa11.08□□□□□ -0.64
SFSWAP-202ENST00000535202 CALD1Q05682 793 aaKnown RBP11.08□□□□□ -0.64
SFSWAP-202ENST00000535202 FSTL1Q12841 308 aa11.08□□□□□ -0.64
SFSWAP-202ENST00000535202 DUSP27Q5VZP5 1158 aa11.08□□□□□ -0.64
SFSWAP-202ENST00000535202 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
SFSWAP-202ENST00000535202 RTKN2Q8IZC4 609 aa11.08□□□□□ -0.64
SFSWAP-202ENST00000535202 SMC1BQ8NDV3 1235 aa11.08□□□□□ -0.64
SFSWAP-202ENST00000535202 RBM17Q96I25 401 aaKnown RBP11.08□□□□□ -0.64
SFSWAP-202ENST00000535202 IFT57Q9NWB7 429 aa11.08□□□□□ -0.64
SFSWAP-202ENST00000535202 TCERG1O14776 1098 aaKnown RBP11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 PPEF1O14829 653 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 DDNO94850 711 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 ZNF853P0CG23 659 aa11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 HOXA10P31260 410 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 GNAI1P63096 354 aa11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 TCIRG1Q13488 830 aa11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 NLRP10Q86W26 655 aa11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 SYNE4Q8N205 404 aa11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 ZNF428Q96B54 188 aa11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 NLRP3Q96P20 1036 aa11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 DBF4Q9UBU7 674 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-202ENST00000535202 POTECB2RU33 542 aa11.06□□□□□ -0.64
SFSWAP-202ENST00000535202 ELL2O00472 640 aaPredicted RBP11.06□□□□□ -0.64
SFSWAP-202ENST00000535202 ANP32CO43423 234 aa11.06□□□□□ -0.64
SFSWAP-202ENST00000535202 IARSP41252 1262 aaKnown RBP11.06□□□□□ -0.64
SFSWAP-202ENST00000535202 PLBD2Q8NHP8 589 aa11.06□□□□□ -0.64
SFSWAP-202ENST00000535202 CRAMP1Q96RY5 1269 aa11.06□□□□□ -0.64
SFSWAP-202ENST00000535202 HYPKQ9NX55 129 aa11.06□□□□□ -0.64
SFSWAP-202ENST00000535202 TRMT112Q9UI30 125 aaKnown RBP11.06□□□□□ -0.64
SFSWAP-202ENST00000535202 SNED1Q8TER0 1413 aa11.06□□□□□ -0.64
SFSWAP-202ENST00000535202 RNF123Q5XPI4 1314 aa11.06□□□□□ -0.64
SFSWAP-202ENST00000535202 HCLS1P14317 486 aaPredicted RBP11.05□□□□□ -0.64
SFSWAP-202ENST00000535202 SLC10A5Q5PT55 438 aa11.05□□□□□ -0.64
SFSWAP-202ENST00000535202 CC2D2BQ6DHV5 1058 aa11.05□□□□□ -0.64
SFSWAP-202ENST00000535202 ANKRD13DQ6ZTN6 518 aa11.05□□□□□ -0.64
SFSWAP-202ENST00000535202 SLC51AQ86UW1 340 aa11.05□□□□□ -0.64
SFSWAP-202ENST00000535202 DDX60Q8IY21 1712 aaKnown RBP11.05□□□□□ -0.64
SFSWAP-202ENST00000535202 MRS2Q9HD23 443 aa11.05□□□□□ -0.64
SFSWAP-202ENST00000535202 ABCC4O15439 1325 aa11.05□□□□□ -0.64
SFSWAP-202ENST00000535202 SH3TC1Q8TE82 1336 aa11.05□□□□□ -0.64
SFSWAP-202ENST00000535202 ZNF541Q9H0D2 1346 aa11.05□□□□□ -0.64
SFSWAP-202ENST00000535202 ATP5J2-PTCD1G3V325 749 aa11.04□□□□□ -0.64
SFSWAP-202ENST00000535202 HTRA3P83110 453 aa11.04□□□□□ -0.64
SFSWAP-202ENST00000535202 PSMD1Q99460 953 aa11.04□□□□□ -0.64
SFSWAP-202ENST00000535202 TMX4Q9H1E5 349 aaPredicted RBP11.04□□□□□ -0.64
SFSWAP-202ENST00000535202 SCN4AP35499 1836 aa11.04□□□□□ -0.64
SFSWAP-202ENST00000535202 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
SFSWAP-202ENST00000535202 RIC3Q7Z5B4 369 aa11.03□□□□□ -0.64
SFSWAP-202ENST00000535202 C8orf58Q8NAV2 365 aa11.03□□□□□ -0.64
SFSWAP-202ENST00000535202 JDP2Q8WYK2 163 aa11.03□□□□□ -0.64
SFSWAP-202ENST00000535202 ISCA1Q9BUE6 129 aa11.03□□□□□ -0.64
SFSWAP-202ENST00000535202 PHAXQ9H814 394 aaKnown RBP11.03□□□□□ -0.64
SFSWAP-202ENST00000535202 TSHZ2Q9NRE2 1034 aa11.03□□□□□ -0.64
SFSWAP-202ENST00000535202 TAF1P21675 1872 aa11.03□□□□□ -0.64
SFSWAP-202ENST00000535202 COL4A5P29400 1685 aa11.02□□□□□ -0.64
SFSWAP-202ENST00000535202 IQCA1LA6NCM1 817 aa11.02□□□□□ -0.65
SFSWAP-202ENST00000535202 GRIPAP1Q4V328 841 aa11.02□□□□□ -0.65
SFSWAP-202ENST00000535202 RTL5Q5HYW3 569 aaPredicted RBP11.02□□□□□ -0.65
SFSWAP-202ENST00000535202 DDX46Q7L014 1031 aaKnown RBP11.02□□□□□ -0.65
SFSWAP-202ENST00000535202 LARGE2Q8N3Y3 721 aa11.02□□□□□ -0.65
SFSWAP-202ENST00000535202 TSR2Q969E8 191 aaKnown RBP11.02□□□□□ -0.65
SFSWAP-202ENST00000535202 FAM89AQ96GI7 184 aa11.02□□□□□ -0.65
SFSWAP-202ENST00000535202 L3MBTL3Q96JM7 780 aaPredicted RBP11.02□□□□□ -0.65
SFSWAP-202ENST00000535202 ATP6V0A2Q9Y487 856 aa11.02□□□□□ -0.65
SFSWAP-202ENST00000535202 FZD9O00144 591 aa11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 PPIP5K2O43314 1243 aa11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 POTEIP0CG38 1075 aa11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 POTEJP0CG39 1038 aa11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 EIF6P56537 245 aaKnown RBP11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 GRAPQ13588 217 aa11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 CCDC27Q2M243 656 aa11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 CCDC30Q5VVM6 783 aa11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 WWC1Q8IX03 1113 aa11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 DNAJC5GQ8N7S2 189 aa11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 TSPYL6Q8N831 410 aa11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 GRAPLQ8TC17 118 aaPredicted RBP11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 TAF1DQ9H5J8 278 aaPredicted RBP11.01□□□□□ -0.65
SFSWAP-202ENST00000535202 BBOX1O75936 387 aa11□□□□□ -0.65
SFSWAP-202ENST00000535202 EAPPQ56P03 285 aaPredicted RBP11□□□□□ -0.65
SFSWAP-202ENST00000535202 CHADLQ6NUI6 762 aa11□□□□□ -0.65
SFSWAP-202ENST00000535202 NIM1KQ8IY84 436 aa11□□□□□ -0.65
SFSWAP-202ENST00000535202 MYD88Q99836 296 aa11□□□□□ -0.65
SFSWAP-202ENST00000535202 HACL1Q9UJ83 578 aa11□□□□□ -0.65
SFSWAP-202ENST00000535202 SALL2Q9Y467 1007 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms