RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ZBTB7BO15156 539 aaPredicted RBP15.45■□□□□ 0.06
SCARB1-204ENST00000535005 GCKRQ14397 625 aa15.45■□□□□ 0.06
SCARB1-204ENST00000535005 CWF19L2Q2TBE0 894 aaKnown RBP15.45■□□□□ 0.06
SCARB1-204ENST00000535005 CHMP4BQ9H444 224 aaKnown RBP15.45■□□□□ 0.06
SCARB1-204ENST00000535005 PARP10Q53GL7 1025 aa15.45■□□□□ 0.06
SCARB1-204ENST00000535005 NLRP10Q86W26 655 aa15.45■□□□□ 0.06
SCARB1-204ENST00000535005 CWC25Q9NXE8 425 aaPredicted RBP15.45■□□□□ 0.06
SCARB1-204ENST00000535005 AAMPQ13685 434 aa15.44■□□□□ 0.06
SCARB1-204ENST00000535005 NLGN1Q8N2Q7 840 aa15.44■□□□□ 0.06
SCARB1-204ENST00000535005 USP44Q9H0E7 712 aa15.44■□□□□ 0.06
SCARB1-204ENST00000535005 ANKRD36CQ5JPF3 1778 aa15.44■□□□□ 0.06
SCARB1-204ENST00000535005 UTYO14607 1347 aa15.44■□□□□ 0.06
SCARB1-204ENST00000535005 SLC16A10Q8TF71 515 aa15.43■□□□□ 0.06
SCARB1-204ENST00000535005 NIP7Q9Y221 180 aaKnown RBP eCLIP15.43■□□□□ 0.06
SCARB1-204ENST00000535005 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
SCARB1-204ENST00000535005 GPTP24298 496 aa15.43■□□□□ 0.06
SCARB1-204ENST00000535005 TM4SF1P30408 202 aa15.43■□□□□ 0.06
SCARB1-204ENST00000535005 TBC1D9BQ66K14 1250 aa15.43■□□□□ 0.06
SCARB1-204ENST00000535005 EXOC6Q8TAG9 804 aa15.43■□□□□ 0.06
SCARB1-204ENST00000535005 H7C1W4 665 aa15.42■□□□□ 0.06
SCARB1-204ENST00000535005 GRM8O00222 908 aa15.42■□□□□ 0.06
SCARB1-204ENST00000535005 GNAI3P08754 354 aa15.42■□□□□ 0.06
SCARB1-204ENST00000535005 ZBTB40Q9NUA8 1239 aa15.42■□□□□ 0.06
SCARB1-204ENST00000535005 NBR1Q14596 966 aa15.41■□□□□ 0.06
SCARB1-204ENST00000535005 NFIXQ14938 502 aa15.41■□□□□ 0.06
SCARB1-204ENST00000535005 SETDB2Q96T68 719 aa15.41■□□□□ 0.06
SCARB1-204ENST00000535005 MEIS3Q99687 375 aa15.41■□□□□ 0.06
SCARB1-204ENST00000535005 C9orf78Q9NZ63 289 aaPredicted RBP15.41■□□□□ 0.06
SCARB1-204ENST00000535005 PCCAP05165 728 aaPredicted RBP15.4■□□□□ 0.06
SCARB1-204ENST00000535005 CASP7P55210 303 aa15.4■□□□□ 0.06
SCARB1-204ENST00000535005 SUSD4Q5VX71 490 aa15.4■□□□□ 0.06
SCARB1-204ENST00000535005 HDAC5Q9UQL6 1122 aa15.4■□□□□ 0.06
SCARB1-204ENST00000535005 PPP1R42Q7Z4L9 355 aa15.4■□□□□ 0.06
SCARB1-204ENST00000535005 ZBTB38Q8NAP3 1195 aaPredicted RBP15.4■□□□□ 0.06
SCARB1-204ENST00000535005 NTSR2O95665 410 aa15.39■□□□□ 0.05
SCARB1-204ENST00000535005 NBPF7P0C2Y1 421 aaPredicted RBP15.39■□□□□ 0.05
SCARB1-204ENST00000535005 UTP14AQ9BVJ6 771 aaKnown RBP15.39■□□□□ 0.05
SCARB1-204ENST00000535005 AFDNP55196 1824 aaKnown RBP15.39■□□□□ 0.05
SCARB1-204ENST00000535005 CARMIL3Q8ND23 1372 aa15.39■□□□□ 0.05
SCARB1-204ENST00000535005 UBTFL1P0CB47 393 aaPredicted RBP15.38■□□□□ 0.05
SCARB1-204ENST00000535005 R3HDM1Q15032 1099 aaKnown RBP15.38■□□□□ 0.05
SCARB1-204ENST00000535005 BICDL1Q6ZP65 573 aa15.38■□□□□ 0.05
SCARB1-204ENST00000535005 PDGFDQ9GZP0 370 aaPredicted RBP15.38■□□□□ 0.05
SCARB1-204ENST00000535005 TRMT112Q9UI30 125 aaKnown RBP15.38■□□□□ 0.05
SCARB1-204ENST00000535005 COL24A1Q17RW2 1714 aa15.38■□□□□ 0.05
SCARB1-204ENST00000535005 CDHR2Q9BYE9 1310 aa15.38■□□□□ 0.05
SCARB1-204ENST00000535005 GNAI2P04899 355 aa15.38■□□□□ 0.05
SCARB1-204ENST00000535005 NYXQ9GZU5 481 aa15.38■□□□□ 0.05
SCARB1-204ENST00000535005 SOCS7O14512 581 aa15.37■□□□□ 0.05
SCARB1-204ENST00000535005 DDR1Q08345 913 aa15.37■□□□□ 0.05
SCARB1-204ENST00000535005 TPTE2Q6XPS3 522 aa15.37■□□□□ 0.05
SCARB1-204ENST00000535005 UBE3BQ7Z3V4 1068 aa15.37■□□□□ 0.05
SCARB1-204ENST00000535005 SH3TC1Q8TE82 1336 aa15.37■□□□□ 0.05
SCARB1-204ENST00000535005 POLRMTO00411 1230 aaKnown RBP15.36■□□□□ 0.05
SCARB1-204ENST00000535005 SLC10A5Q5PT55 438 aa15.36■□□□□ 0.05
SCARB1-204ENST00000535005 FAM89AQ96GI7 184 aa15.36■□□□□ 0.05
SCARB1-204ENST00000535005 PLA2G12BQ9BX93 195 aa15.36■□□□□ 0.05
SCARB1-204ENST00000535005 CASZ1Q86V15 1759 aa15.36■□□□□ 0.05
SCARB1-204ENST00000535005 SERPINB2P05120 415 aa15.36■□□□□ 0.05
SCARB1-204ENST00000535005 NBPF5PQ86XG9 351 aaPredicted RBP15.36■□□□□ 0.05
SCARB1-204ENST00000535005 KAZALD1Q96I82 304 aa15.36■□□□□ 0.05
SCARB1-204ENST00000535005 MMP10P09238 476 aa15.35■□□□□ 0.05
SCARB1-204ENST00000535005 HSP90B1P14625 803 aaKnown RBP15.35■□□□□ 0.05
SCARB1-204ENST00000535005 SUCLG2Q96I99 432 aa15.35■□□□□ 0.05
SCARB1-204ENST00000535005 LRRFIP2Q9Y608 721 aaKnown RBP15.35■□□□□ 0.05
SCARB1-204ENST00000535005 IRS4O14654 1257 aaPredicted RBP15.34■□□□□ 0.05
SCARB1-204ENST00000535005 JARID2Q92833 1246 aaPredicted RBP15.34■□□□□ 0.05
SCARB1-204ENST00000535005 DDRGK1Q96HY6 314 aa15.34■□□□□ 0.05
SCARB1-204ENST00000535005 FAM177BA6PVY3 158 aa15.33■□□□□ 0.05
SCARB1-204ENST00000535005 MSL1Q68DK7 614 aa15.33■□□□□ 0.05
SCARB1-204ENST00000535005 RPAP2Q8IXW5 612 aaPredicted RBP15.33■□□□□ 0.05
SCARB1-204ENST00000535005 SYNE4Q8N205 404 aa15.33■□□□□ 0.05
SCARB1-204ENST00000535005 MTFR1LQ9H019 292 aa15.33■□□□□ 0.05
SCARB1-204ENST00000535005 PARP3Q9Y6F1 533 aa15.33■□□□□ 0.05
SCARB1-204ENST00000535005 PSDA5PKW4 1024 aaPredicted RBP15.33■□□□□ 0.04
SCARB1-204ENST00000535005 FOXO4P98177 505 aa15.33■□□□□ 0.04
SCARB1-204ENST00000535005 MTX1Q13505 466 aa15.33■□□□□ 0.04
SCARB1-204ENST00000535005 RABL6Q3YEC7 729 aaPredicted RBP15.33■□□□□ 0.04
SCARB1-204ENST00000535005 ERFEQ4G0M1 354 aa15.33■□□□□ 0.04
SCARB1-204ENST00000535005 PRR5LQ6MZQ0 368 aa15.33■□□□□ 0.04
SCARB1-204ENST00000535005 CNBD1Q8NA66 436 aa15.33■□□□□ 0.04
SCARB1-204ENST00000535005 PCDHB15Q9Y5E8 787 aa15.33■□□□□ 0.04
SCARB1-204ENST00000535005 RIC1Q4ADV7 1423 aa15.33■□□□□ 0.04
SCARB1-204ENST00000535005 PDE8AO60658 829 aa15.32■□□□□ 0.04
SCARB1-204ENST00000535005 GTF2E1P29083 439 aaPredicted RBP15.32■□□□□ 0.04
SCARB1-204ENST00000535005 EPHA10Q5JZY3 1008 aa15.32■□□□□ 0.04
SCARB1-204ENST00000535005 NUTM1Q86Y26 1132 aa15.32■□□□□ 0.04
SCARB1-204ENST00000535005 C1orf115Q9H7X2 142 aa15.32■□□□□ 0.04
SCARB1-204ENST00000535005 NRXN2Q9P2S2 1712 aa15.32■□□□□ 0.04
SCARB1-204ENST00000535005 CSF1RP07333 972 aa15.31■□□□□ 0.04
SCARB1-204ENST00000535005 ATP8B2P98198 1209 aa15.31■□□□□ 0.04
SCARB1-204ENST00000535005 CEP85Q6P2H3 762 aa15.31■□□□□ 0.04
SCARB1-204ENST00000535005 ANKRD44Q8N8A2 993 aa15.31■□□□□ 0.04
SCARB1-204ENST00000535005 BICC1Q9H694 974 aaKnown RBP15.31■□□□□ 0.04
SCARB1-204ENST00000535005 ABCC12Q96J65 1359 aa15.31■□□□□ 0.04
SCARB1-204ENST00000535005 ZBTB7AO95365 584 aa15.3■□□□□ 0.04
SCARB1-204ENST00000535005 PRKCSHP14314 528 aaPredicted RBP15.3■□□□□ 0.04
SCARB1-204ENST00000535005 HCLS1P14317 486 aaPredicted RBP15.3■□□□□ 0.04
SCARB1-204ENST00000535005 ST5P78524 1137 aa15.3■□□□□ 0.04
SCARB1-204ENST00000535005 BACH2Q9BYV9 841 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms