RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 IBTKQ9P2D0 1353 aaPredicted RBP14.01□□□□□ -0.17
PTP4A2-216ENST00000534796 MYL6BP14649 208 aa14.01□□□□□ -0.17
PTP4A2-216ENST00000534796 FKBP4Q02790 459 aaKnown RBP eCLIP14.01□□□□□ -0.17
PTP4A2-216ENST00000534796 KLRG1Q96E93 195 aa14.01□□□□□ -0.17
PTP4A2-216ENST00000534796 KDM3BQ7LBC6 1761 aa14.01□□□□□ -0.17
PTP4A2-216ENST00000534796 FER1L6Q2WGJ9 1857 aa14□□□□□ -0.17
PTP4A2-216ENST00000534796 MYBBP1AQ9BQG0 1328 aaKnown RBP14□□□□□ -0.17
PTP4A2-216ENST00000534796 IQCA1LA6NCM1 817 aa14□□□□□ -0.17
PTP4A2-216ENST00000534796 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
PTP4A2-216ENST00000534796 WDR90Q96KV7 1748 aa14□□□□□ -0.17
PTP4A2-216ENST00000534796 ARFGEF2Q9Y6D5 1785 aa13.99□□□□□ -0.17
PTP4A2-216ENST00000534796 POTECB2RU33 542 aa13.99□□□□□ -0.17
PTP4A2-216ENST00000534796 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
PTP4A2-216ENST00000534796 CRY2Q49AN0 593 aa13.99□□□□□ -0.17
PTP4A2-216ENST00000534796 GRIPAP1Q4V328 841 aa13.99□□□□□ -0.17
PTP4A2-216ENST00000534796 PARP10Q53GL7 1025 aa13.99□□□□□ -0.17
PTP4A2-216ENST00000534796 CC2D2BQ6DHV5 1058 aa13.99□□□□□ -0.17
PTP4A2-216ENST00000534796 TTLL7Q6ZT98 887 aa13.99□□□□□ -0.17
PTP4A2-216ENST00000534796 ZBTB3Q9H5J0 574 aa13.99□□□□□ -0.17
PTP4A2-216ENST00000534796 SLX4Q8IY92 1834 aa13.99□□□□□ -0.17
PTP4A2-216ENST00000534796 RIC1Q4ADV7 1423 aa13.98□□□□□ -0.17
PTP4A2-216ENST00000534796 DLG5Q8TDM6 1919 aa13.98□□□□□ -0.17
PTP4A2-216ENST00000534796 DDNO94850 711 aaPredicted RBP13.98□□□□□ -0.17
PTP4A2-216ENST00000534796 GIGYF2Q6Y7W6 1299 aaKnown RBP13.98□□□□□ -0.17
PTP4A2-216ENST00000534796 PPP1R42Q7Z4L9 355 aa13.98□□□□□ -0.17
PTP4A2-216ENST00000534796 JMYQ8N9B5 988 aa13.98□□□□□ -0.17
PTP4A2-216ENST00000534796 RPGRQ92834 1020 aaKnown RBP13.98□□□□□ -0.17
PTP4A2-216ENST00000534796 GPTP24298 496 aa13.97□□□□□ -0.17
PTP4A2-216ENST00000534796 HTRA3P83110 453 aa13.97□□□□□ -0.17
PTP4A2-216ENST00000534796 DDX10Q13206 875 aaKnown RBP13.97□□□□□ -0.17
PTP4A2-216ENST00000534796 WDR43Q15061 677 aaKnown RBP eCLIP13.97□□□□□ -0.17
PTP4A2-216ENST00000534796 NUTM1Q86Y26 1132 aa13.97□□□□□ -0.17
PTP4A2-216ENST00000534796 ZNF34Q8IZ26 560 aa13.97□□□□□ -0.17
PTP4A2-216ENST00000534796 L3MBTL3Q96JM7 780 aaPredicted RBP13.97□□□□□ -0.17
PTP4A2-216ENST00000534796 ABCC12Q96J65 1359 aa13.96□□□□□ -0.17
PTP4A2-216ENST00000534796 DICER1Q9UPY3 1922 aaKnown RBP13.96□□□□□ -0.17
PTP4A2-216ENST00000534796 EIF2S2P20042 333 aaKnown RBP13.96□□□□□ -0.17
PTP4A2-216ENST00000534796 HOXA10P31260 410 aaPredicted RBP13.96□□□□□ -0.17
PTP4A2-216ENST00000534796 HSP90AB3PQ58FF7 597 aa13.96□□□□□ -0.17
PTP4A2-216ENST00000534796 SUSD4Q5VX71 490 aa13.96□□□□□ -0.17
PTP4A2-216ENST00000534796 RBM17Q96I25 401 aaKnown RBP13.96□□□□□ -0.17
PTP4A2-216ENST00000534796 PSMD1Q99460 953 aa13.96□□□□□ -0.17
PTP4A2-216ENST00000534796 TMX4Q9H1E5 349 aaPredicted RBP13.96□□□□□ -0.17
PTP4A2-216ENST00000534796 ZNF277Q9NRM2 450 aaPredicted RBP13.96□□□□□ -0.17
PTP4A2-216ENST00000534796 CCDC88AQ3V6T2 1871 aa13.95□□□□□ -0.18
PTP4A2-216ENST00000534796 RNF123Q5XPI4 1314 aa13.95□□□□□ -0.18
PTP4A2-216ENST00000534796 UBN2Q6ZU65 1347 aa13.95□□□□□ -0.18
PTP4A2-216ENST00000534796 IARSP41252 1262 aaKnown RBP13.95□□□□□ -0.18
PTP4A2-216ENST00000534796 SYNE4Q8N205 404 aa13.95□□□□□ -0.18
PTP4A2-216ENST00000534796 JDP2Q8WYK2 163 aa13.95□□□□□ -0.18
PTP4A2-216ENST00000534796 RUNDC1Q96C34 613 aa13.95□□□□□ -0.18
PTP4A2-216ENST00000534796 CRAMP1Q96RY5 1269 aa13.95□□□□□ -0.18
PTP4A2-216ENST00000534796 NTSR2O95665 410 aa13.94□□□□□ -0.18
PTP4A2-216ENST00000534796 PDIA6Q15084 440 aa13.94□□□□□ -0.18
PTP4A2-216ENST00000534796 LDHDQ86WU2 507 aa13.94□□□□□ -0.18
PTP4A2-216ENST00000534796 NLRP3Q96P20 1036 aa13.94□□□□□ -0.18
PTP4A2-216ENST00000534796 UTP14AQ9BVJ6 771 aaKnown RBP13.94□□□□□ -0.18
PTP4A2-216ENST00000534796 FZD9O00144 591 aa13.93□□□□□ -0.18
PTP4A2-216ENST00000534796 CHL1O00533 1208 aa13.93□□□□□ -0.18
PTP4A2-216ENST00000534796 NEUROD2Q15784 382 aa13.93□□□□□ -0.18
PTP4A2-216ENST00000534796 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
PTP4A2-216ENST00000534796 LRP10Q7Z4F1 713 aa13.93□□□□□ -0.18
PTP4A2-216ENST00000534796 TAF1DQ9H5J8 278 aaPredicted RBP13.93□□□□□ -0.18
PTP4A2-216ENST00000534796 CACNA1SQ13698 1873 aa13.93□□□□□ -0.18
PTP4A2-216ENST00000534796 PPEF1O14829 653 aaPredicted RBP13.92□□□□□ -0.18
PTP4A2-216ENST00000534796 HOXB7P09629 217 aa13.92□□□□□ -0.18
PTP4A2-216ENST00000534796 SLC10A5Q5PT55 438 aa13.92□□□□□ -0.18
PTP4A2-216ENST00000534796 PNMA8AQ86V59 439 aaPredicted RBP13.92□□□□□ -0.18
PTP4A2-216ENST00000534796 CCDC146Q8IYE0 955 aa13.92□□□□□ -0.18
PTP4A2-216ENST00000534796 GPC2Q8N158 579 aa13.92□□□□□ -0.18
PTP4A2-216ENST00000534796 DDX21Q9NR30 783 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTP4A2-216ENST00000534796 HACL1Q9UJ83 578 aa13.92□□□□□ -0.18
PTP4A2-216ENST00000534796 NUP98P52948 1817 aa13.92□□□□□ -0.18
PTP4A2-216ENST00000534796 ZNF541Q9H0D2 1346 aa13.91□□□□□ -0.18
PTP4A2-216ENST00000534796 EIF6P56537 245 aaKnown RBP13.91□□□□□ -0.18
PTP4A2-216ENST00000534796 PROSER3Q2NL68 480 aa13.91□□□□□ -0.18
PTP4A2-216ENST00000534796 COPS6Q7L5N1 327 aa13.91□□□□□ -0.18
PTP4A2-216ENST00000534796 MIER1Q8N108 512 aa13.91□□□□□ -0.18
PTP4A2-216ENST00000534796 SNED1Q8TER0 1413 aa13.9□□□□□ -0.18
PTP4A2-216ENST00000534796 AIMP1Q12904 312 aaKnown RBP13.9□□□□□ -0.18
PTP4A2-216ENST00000534796 LARGE2Q8N3Y3 721 aa13.9□□□□□ -0.18
PTP4A2-216ENST00000534796 XAGE3Q8WTP9 111 aa13.9□□□□□ -0.18
PTP4A2-216ENST00000534796 VPS33BQ9H267 617 aa13.9□□□□□ -0.18
PTP4A2-216ENST00000534796 ADAMTS8Q9UP79 889 aa13.9□□□□□ -0.18
PTP4A2-216ENST00000534796 LAS1LQ9Y4W2 734 aaKnown RBP13.9□□□□□ -0.18
PTP4A2-216ENST00000534796 ANXA1P04083 346 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 POTEIP0CG38 1075 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 EPHX2P34913 555 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 TCIRG1Q13488 830 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 EAPPQ56P03 285 aaPredicted RBP13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 HDGFL1Q5TGJ6 251 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 SUPT20HQ8NEM7 779 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 NECTIN2Q92692 538 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 TRIM35Q9UPQ4 493 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 ATP6V0A2Q9Y487 856 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 SCN4AP35499 1836 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 SH3TC1Q8TE82 1336 aa13.89□□□□□ -0.19
PTP4A2-216ENST00000534796 BBOX1O75936 387 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms