RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 VSIG10LQ86VR7 867 aa2.59□□□□□ -1.99
COPB1-212ENST00000534771 AGBL5Q8NDL9 886 aa2.59□□□□□ -1.99
COPB1-212ENST00000534771 FLCNQ8NFG4 579 aa2.59□□□□□ -1.99
COPB1-212ENST00000534771 PIM2Q9P1W9 311 aa2.59□□□□□ -1.99
COPB1-212ENST00000534771 GIGYF1O75420 1035 aaPredicted RBP2.58□□□□□ -2
COPB1-212ENST00000534771 INSRRP14616 1297 aa2.58□□□□□ -2
COPB1-212ENST00000534771 PUM1Q14671 1186 aaKnown RBP eCLIP2.58□□□□□ -2
COPB1-212ENST00000534771 RNF20Q5VTR2 975 aa2.58□□□□□ -2
COPB1-212ENST00000534771 FBXO31Q5XUX0 539 aaPredicted RBP2.58□□□□□ -2
COPB1-212ENST00000534771 CC2D2BQ6DHV5 1058 aa2.58□□□□□ -2
COPB1-212ENST00000534771 PROCA1Q8NCQ7 364 aaPredicted RBP2.58□□□□□ -2
COPB1-212ENST00000534771 EPS8L1Q8TE68 723 aa2.58□□□□□ -2
COPB1-212ENST00000534771 UBL7Q96S82 380 aaPredicted RBP2.58□□□□□ -2
COPB1-212ENST00000534771 ESF1Q9H501 851 aaKnown RBP2.58□□□□□ -2
COPB1-212ENST00000534771 SLC24A3Q9HC58 644 aa2.58□□□□□ -2
COPB1-212ENST00000534771 RAB6BQ9NRW1 208 aa2.58□□□□□ -2
COPB1-212ENST00000534771 A0A1W2PNR3 127 aa2.57□□□□□ -2
COPB1-212ENST00000534771 F8W735 103 aaPredicted RBP2.57□□□□□ -2
COPB1-212ENST00000534771 PRNPP04156 253 aa2.57□□□□□ -2
COPB1-212ENST00000534771 ERVK-9P63128 1117 aa2.57□□□□□ -2
COPB1-212ENST00000534771 SKOR2Q2VWA4 1001 aaPredicted RBP2.57□□□□□ -2
COPB1-212ENST00000534771 ARSJQ5FYB0 599 aaPredicted RBP2.57□□□□□ -2
COPB1-212ENST00000534771 DTWD1Q8N5C7 304 aa2.57□□□□□ -2
COPB1-212ENST00000534771 CNKSR1Q969H4 720 aa2.57□□□□□ -2
COPB1-212ENST00000534771 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.57□□□□□ -2
COPB1-212ENST00000534771 PARD6AQ9NPB6 346 aa2.57□□□□□ -2
COPB1-212ENST00000534771 PAK6Q9NQU5 681 aaPredicted RBP2.57□□□□□ -2
COPB1-212ENST00000534771 PITPNM2Q9BZ72 1349 aa2.57□□□□□ -2
COPB1-212ENST00000534771 A0A0G2JLL6 359 aaPredicted RBP2.56□□□□□ -2
COPB1-212ENST00000534771 SOCS7O14512 581 aa2.56□□□□□ -2
COPB1-212ENST00000534771 C1QTNF9P0C862 333 aa2.56□□□□□ -2
COPB1-212ENST00000534771 KRTAP5-9P26371 169 aa2.56□□□□□ -2
COPB1-212ENST00000534771 MCCD1P59942 119 aaPredicted RBP2.56□□□□□ -2
COPB1-212ENST00000534771 HNRNPA0Q13151 305 aaKnown RBP2.56□□□□□ -2
COPB1-212ENST00000534771 MSMPQ1L6U9 139 aa2.56□□□□□ -2
COPB1-212ENST00000534771 SH3D19Q5HYK7 790 aa2.56□□□□□ -2
COPB1-212ENST00000534771 TBC1D9Q6ZT07 1266 aa2.56□□□□□ -2
COPB1-212ENST00000534771 CYP2U1Q7Z449 544 aa2.56□□□□□ -2
COPB1-212ENST00000534771 ARMC10Q8N2F6 343 aa2.56□□□□□ -2
COPB1-212ENST00000534771 TMEM130Q8N3G9 435 aa2.56□□□□□ -2
COPB1-212ENST00000534771 PPP1R16BQ96T49 567 aa2.56□□□□□ -2
COPB1-212ENST00000534771 ESYT1Q9BSJ8 1104 aa2.56□□□□□ -2
COPB1-212ENST00000534771 PCDHB9Q9Y5E1 797 aa2.56□□□□□ -2
COPB1-212ENST00000534771 ZBBXA8MT70 800 aa2.55□□□□□ -2
COPB1-212ENST00000534771 GNRH1P01148 92 aa2.55□□□□□ -2
COPB1-212ENST00000534771 FAM157BP0CG42 384 aa2.55□□□□□ -2
COPB1-212ENST00000534771 KRTAP10-7P60409 375 aaPredicted RBP2.55□□□□□ -2
COPB1-212ENST00000534771 MLANAQ16655 118 aa2.55□□□□□ -2
COPB1-212ENST00000534771 MSL1Q68DK7 614 aa2.55□□□□□ -2
COPB1-212ENST00000534771 SYDE1Q6ZW31 735 aaPredicted RBP2.55□□□□□ -2
COPB1-212ENST00000534771 AGGF1Q8N302 714 aaeCLIP2.55□□□□□ -2
COPB1-212ENST00000534771 AIDAQ96BJ3 306 aa2.55□□□□□ -2
COPB1-212ENST00000534771 SLC30A3Q99726 388 aa2.55□□□□□ -2
COPB1-212ENST00000534771 HMX1Q9NP08 348 aaPredicted RBP2.55□□□□□ -2
COPB1-212ENST00000534771 LEMD3Q9Y2U8 911 aa2.55□□□□□ -2
COPB1-212ENST00000534771 NPIPB6E9PJ23 425 aa2.54□□□□□ -2
COPB1-212ENST00000534771 TRAK2O60296 914 aa2.54□□□□□ -2
COPB1-212ENST00000534771 USP17L8P0C7I0 530 aa2.54□□□□□ -2
COPB1-212ENST00000534771 KRTAP10-9P60411 292 aa2.54□□□□□ -2
COPB1-212ENST00000534771 TBC1D8BQ0IIM8 1120 aa2.54□□□□□ -2
COPB1-212ENST00000534771 ATG4DQ86TL0 474 aaPredicted RBP2.54□□□□□ -2
COPB1-212ENST00000534771 ZNF592Q92610 1267 aa2.54□□□□□ -2
COPB1-212ENST00000534771 DDRGK1Q96HY6 314 aa2.54□□□□□ -2
COPB1-212ENST00000534771 SLC4A9Q96Q91 983 aa2.54□□□□□ -2
COPB1-212ENST00000534771 MRPL18Q9H0U6 180 aaKnown RBP2.54□□□□□ -2
COPB1-212ENST00000534771 OSBPL3Q9H4L5 887 aa2.54□□□□□ -2
COPB1-212ENST00000534771 ZCCHC4Q9H5U6 513 aa2.54□□□□□ -2
COPB1-212ENST00000534771 IGFLR1Q9H665 355 aa2.54□□□□□ -2
COPB1-212ENST00000534771 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.54□□□□□ -21e-34■■■■□ 19.8
COPB1-212ENST00000534771 ZNF330Q9Y3S2 320 aaPredicted RBP2.54□□□□□ -2
COPB1-212ENST00000534771 GJA3Q9Y6H8 435 aa2.54□□□□□ -2
COPB1-212ENST00000534771 DLL1O00548 723 aa2.53□□□□□ -2
COPB1-212ENST00000534771 EFSO43281 561 aa2.53□□□□□ -2
COPB1-212ENST00000534771 DEAF1O75398 565 aaPredicted RBP2.53□□□□□ -2
COPB1-212ENST00000534771 RGS9O75916 674 aaPredicted RBP2.53□□□□□ -2
COPB1-212ENST00000534771 IL2RAP01589 272 aa2.53□□□□□ -2
COPB1-212ENST00000534771 FBXO45P0C2W1 286 aa2.53□□□□□ -2
COPB1-212ENST00000534771 FOSL1P15407 271 aa2.53□□□□□ -2
COPB1-212ENST00000534771 RFC5P40937 340 aa2.53□□□□□ -2
COPB1-212ENST00000534771 SCTRP47872 440 aa2.53□□□□□ -2
COPB1-212ENST00000534771 HMGA2P52926 109 aa2.53□□□□□ -2
COPB1-212ENST00000534771 NFIXQ14938 502 aa2.53□□□□□ -2
COPB1-212ENST00000534771 ZNF792Q3KQV3 632 aa2.53□□□□□ -2
COPB1-212ENST00000534771 TMEM259Q4ZIN3 620 aa2.53□□□□□ -2
COPB1-212ENST00000534771 RAB44Q7Z6P3 723 aaPredicted RBP2.53□□□□□ -2
COPB1-212ENST00000534771 XAGE2Q96GT9 111 aa2.53□□□□□ -2
COPB1-212ENST00000534771 TRIM34Q9BYJ4 488 aa2.53□□□□□ -2
COPB1-212ENST00000534771 FAM117AQ9C073 453 aa2.53□□□□□ -2
COPB1-212ENST00000534771 ATG3Q9NT62 314 aa2.53□□□□□ -2
COPB1-212ENST00000534771 PCDHB11Q9Y5F2 797 aa2.53□□□□□ -2
COPB1-212ENST00000534771 MYCP01106 439 aaPredicted RBP2.52□□□□□ -2.01
COPB1-212ENST00000534771 ATP4AP20648 1035 aa2.52□□□□□ -2.01
COPB1-212ENST00000534771 PLA2G4AP47712 749 aa2.52□□□□□ -2.01
COPB1-212ENST00000534771 PLCL1Q15111 1095 aa2.52□□□□□ -2.01
COPB1-212ENST00000534771 ESCO1Q5FWF5 840 aa2.52□□□□□ -2.01
COPB1-212ENST00000534771 PSAPL1Q6NUJ1 521 aa2.52□□□□□ -2.01
COPB1-212ENST00000534771 Q6ZS46 218 aa2.52□□□□□ -2.01
COPB1-212ENST00000534771 KDM4CQ9H3R0 1056 aa2.52□□□□□ -2.01
COPB1-212ENST00000534771 BSDC1Q9NW68 430 aaPredicted RBP2.52□□□□□ -2.01
COPB1-212ENST00000534771 HRH3Q9Y5N1 445 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 240.1 ms