RNA–Protein interactions for RNA: ENST00000534204.1

KNL1-212, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-212ENST00000534204 HABP4Q5JVS0 413 aaKnown RBP16.5■□□□□ 0.23
KNL1-212ENST00000534204 ALDH1B1P30837 517 aa16.49■□□□□ 0.23
KNL1-212ENST00000534204 TTC5Q8N0Z6 440 aa16.49■□□□□ 0.23
KNL1-212ENST00000534204 IL17REQ8NFR9 667 aa16.49■□□□□ 0.23
KNL1-212ENST00000534204 TEX13AQ9BXU3 409 aaPredicted RBP16.49■□□□□ 0.23
KNL1-212ENST00000534204 RNF186Q9NXI6 227 aa16.49■□□□□ 0.23
KNL1-212ENST00000534204 HPS5Q9UPZ3 1129 aa16.49■□□□□ 0.23
KNL1-212ENST00000534204 KCNQ3O43525 872 aa16.48■□□□□ 0.23
KNL1-212ENST00000534204 HMOX1P09601 288 aa16.48■□□□□ 0.23
KNL1-212ENST00000534204 LARGE2Q8N3Y3 721 aa16.48■□□□□ 0.23
KNL1-212ENST00000534204 TRPM4Q8TD43 1214 aa16.48■□□□□ 0.23
KNL1-212ENST00000534204 LAMB4A4D0S4 1761 aa16.48■□□□□ 0.23
KNL1-212ENST00000534204 RBBP6Q7Z6E9 1792 aaKnown RBP16.48■□□□□ 0.23
KNL1-212ENST00000534204 NPC1L1Q9UHC9 1359 aa16.48■□□□□ 0.23
KNL1-212ENST00000534204 LAMB2P55268 1798 aa16.47■□□□□ 0.23
KNL1-212ENST00000534204 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
KNL1-212ENST00000534204 CXCL9Q07325 125 aa16.47■□□□□ 0.23
KNL1-212ENST00000534204 CTU1Q7Z7A3 348 aaKnown RBP16.47■□□□□ 0.23
KNL1-212ENST00000534204 ZNF408Q9H9D4 720 aa16.47■□□□□ 0.23
KNL1-212ENST00000534204 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
KNL1-212ENST00000534204 SHTN1A0MZ66 631 aa16.46■□□□□ 0.23
KNL1-212ENST00000534204 HUNKP57058 714 aa16.46■□□□□ 0.23
KNL1-212ENST00000534204 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
KNL1-212ENST00000534204 TPTE2Q6XPS3 522 aa16.46■□□□□ 0.23
KNL1-212ENST00000534204 NBPF26B4DH59 902 aa16.45■□□□□ 0.22
KNL1-212ENST00000534204 HOXA10P31260 410 aaPredicted RBP16.45■□□□□ 0.22
KNL1-212ENST00000534204 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
KNL1-212ENST00000534204 KIF23Q02241 960 aaPredicted RBP16.45■□□□□ 0.22
KNL1-212ENST00000534204 NBPF10Q6P3W6 841 aaKnown RBP16.45■□□□□ 0.22
KNL1-212ENST00000534204 NBPF15Q8N660 670 aa16.45■□□□□ 0.22
KNL1-212ENST00000534204 GCC1Q96CN9 775 aa16.45■□□□□ 0.22
KNL1-212ENST00000534204 NIP7Q9Y221 180 aaKnown RBP eCLIP16.45■□□□□ 0.22
KNL1-212ENST00000534204 CEMIPQ8WUJ3 1361 aa16.45■□□□□ 0.22
KNL1-212ENST00000534204 DUOX1Q9NRD9 1551 aa16.45■□□□□ 0.22
KNL1-212ENST00000534204 HTTP42858 3142 aa16.45■□□□□ 0.22
KNL1-212ENST00000534204 RGL2O15211 777 aa16.44■□□□□ 0.22
KNL1-212ENST00000534204 TRPA1O75762 1119 aa16.44■□□□□ 0.22
KNL1-212ENST00000534204 FXR1P51114 621 aaKnown RBP eCLIP16.44■□□□□ 0.22
KNL1-212ENST00000534204 HLFQ16534 295 aa16.44■□□□□ 0.22
KNL1-212ENST00000534204 RGMBQ6NW40 437 aa16.44■□□□□ 0.22
KNL1-212ENST00000534204 ZC3H15Q8WU90 426 aaKnown RBP16.44■□□□□ 0.22
KNL1-212ENST00000534204 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
KNL1-212ENST00000534204 KIF7Q2M1P5 1343 aa16.44■□□□□ 0.22
KNL1-212ENST00000534204 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
KNL1-212ENST00000534204 AOC3Q16853 763 aa16.43■□□□□ 0.22
KNL1-212ENST00000534204 CDC37L1Q7L3B6 337 aa16.43■□□□□ 0.22
KNL1-212ENST00000534204 NIM1KQ8IY84 436 aa16.43■□□□□ 0.22
KNL1-212ENST00000534204 CDHR2Q9BYE9 1310 aa16.43■□□□□ 0.22
KNL1-212ENST00000534204 COL3A1P02461 1466 aaPredicted RBP16.42■□□□□ 0.22
KNL1-212ENST00000534204 PAPPA2Q9BXP8 1791 aa16.42■□□□□ 0.22
KNL1-212ENST00000534204 SZT2Q5T011 3432 aa16.42■□□□□ 0.22
KNL1-212ENST00000534204 CSRNP1Q96S65 589 aa16.42■□□□□ 0.22
KNL1-212ENST00000534204 PANK3Q9H999 370 aa16.42■□□□□ 0.22
KNL1-212ENST00000534204 C3orf67Q6ZVT6 689 aa16.41■□□□□ 0.22
KNL1-212ENST00000534204 MORC1Q86VD1 984 aa16.41■□□□□ 0.22
KNL1-212ENST00000534204 NUTM1Q86Y26 1132 aa16.41■□□□□ 0.22
KNL1-212ENST00000534204 ZNF652Q9Y2D9 606 aa16.41■□□□□ 0.22
KNL1-212ENST00000534204 LRRC37AA6NMS7 1700 aa16.41■□□□□ 0.22
KNL1-212ENST00000534204 TAF1P21675 1872 aa16.41■□□□□ 0.22
KNL1-212ENST00000534204 BRCA2P51587 3418 aa16.4■□□□□ 0.22
KNL1-212ENST00000534204 PPIP5K2O43314 1243 aa16.4■□□□□ 0.22
KNL1-212ENST00000534204 SLC10A3P09131 477 aa16.4■□□□□ 0.22
KNL1-212ENST00000534204 USP48Q86UV5 1035 aa16.4■□□□□ 0.22
KNL1-212ENST00000534204 ZNRF3Q9ULT6 936 aa16.4■□□□□ 0.22
KNL1-212ENST00000534204 ANKRD36CQ5JPF3 1778 aa16.4■□□□□ 0.22
KNL1-212ENST00000534204 TEFQ10587 303 aa16.39■□□□□ 0.21
KNL1-212ENST00000534204 GRIPAP1Q4V328 841 aa16.39■□□□□ 0.21
KNL1-212ENST00000534204 PPEF1O14829 653 aaPredicted RBP16.38■□□□□ 0.21
KNL1-212ENST00000534204 EGFRP00533 1210 aa16.38■□□□□ 0.21
KNL1-212ENST00000534204 CRAMP1Q96RY5 1269 aa16.38■□□□□ 0.21
KNL1-212ENST00000534204 RTFDC1Q9BY42 306 aaPredicted RBP16.38■□□□□ 0.21
KNL1-212ENST00000534204 GBA2Q9HCG7 927 aaPredicted RBP16.38■□□□□ 0.21
KNL1-212ENST00000534204 UBN2Q6ZU65 1347 aa16.38■□□□□ 0.21
KNL1-212ENST00000534204 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
KNL1-212ENST00000534204 YDJCA8MPS7 323 aa16.37■□□□□ 0.21
KNL1-212ENST00000534204 CCDC102AQ96A19 550 aa16.37■□□□□ 0.21
KNL1-212ENST00000534204 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
KNL1-212ENST00000534204 ADM5C9JUS6 153 aa16.36■□□□□ 0.21
KNL1-212ENST00000534204 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
KNL1-212ENST00000534204 VPS33BQ9H267 617 aa16.36■□□□□ 0.21
KNL1-212ENST00000534204 SCN9AQ15858 1988 aa16.36■□□□□ 0.21
KNL1-212ENST00000534204 CENPFP49454 3210 aa16.35■□□□□ 0.21
KNL1-212ENST00000534204 TCERG1O14776 1098 aaKnown RBP16.35■□□□□ 0.21
KNL1-212ENST00000534204 RAD17O75943 681 aa16.35■□□□□ 0.21
KNL1-212ENST00000534204 ZNF157P51786 506 aaPredicted RBP16.35■□□□□ 0.21
KNL1-212ENST00000534204 PKN2Q16513 984 aaKnown RBP16.35■□□□□ 0.21
KNL1-212ENST00000534204 RASAL3Q86YV0 1011 aa16.35■□□□□ 0.21
KNL1-212ENST00000534204 ZNF296Q8WUU4 475 aaPredicted RBP16.35■□□□□ 0.21
KNL1-212ENST00000534204 CNOT7Q9UIV1 285 aaKnown RBP16.35■□□□□ 0.21
KNL1-212ENST00000534204 DDX60Q8IY21 1712 aaKnown RBP16.35■□□□□ 0.21
KNL1-212ENST00000534204 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
KNL1-212ENST00000534204 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
KNL1-212ENST00000534204 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
KNL1-212ENST00000534204 POLR3GLQ9BT43 218 aa16.34■□□□□ 0.21
KNL1-212ENST00000534204 ATP6V0A2Q9Y487 856 aa16.34■□□□□ 0.21
KNL1-212ENST00000534204 KDM3BQ7LBC6 1761 aa16.33■□□□□ 0.21
KNL1-212ENST00000534204 BTBD11A6QL63 1104 aa16.33■□□□□ 0.2
KNL1-212ENST00000534204 KIAA2012Q0VF49 1180 aa16.33■□□□□ 0.2
KNL1-212ENST00000534204 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
KNL1-212ENST00000534204 MICALL2Q8IY33 904 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms