RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.33
CAPN1-227ENST00000533909 DLEC1Q9Y238 1755 aa17.14■□□□□ 0.33
CAPN1-227ENST00000533909 ZNF521Q96K83 1311 aa17.14■□□□□ 0.33
CAPN1-227ENST00000533909 ABCC12Q96J65 1359 aa17.14■□□□□ 0.33
CAPN1-227ENST00000533909 ARFGEF1Q9Y6D6 1849 aa17.13■□□□□ 0.33
CAPN1-227ENST00000533909 VAMP4O75379 141 aa17.13■□□□□ 0.33
CAPN1-227ENST00000533909 ALDH1B1P30837 517 aa17.13■□□□□ 0.33
CAPN1-227ENST00000533909 NEXNQ0ZGT2 675 aa17.13■□□□□ 0.33
CAPN1-227ENST00000533909 PRPF40BQ6NWY9 871 aaKnown RBP17.13■□□□□ 0.33
CAPN1-227ENST00000533909 NLRP3Q96P20 1036 aa17.13■□□□□ 0.33
CAPN1-227ENST00000533909 MYD88Q99836 296 aa17.13■□□□□ 0.33
CAPN1-227ENST00000533909 SH3TC1Q8TE82 1336 aa17.13■□□□□ 0.33
CAPN1-227ENST00000533909 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
CAPN1-227ENST00000533909 KLRG2A4D1S0 409 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-227ENST00000533909 C21orf2O43822 256 aa17.12■□□□□ 0.33
CAPN1-227ENST00000533909 SOGA3Q5TF21 947 aa17.12■□□□□ 0.33
CAPN1-227ENST00000533909 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
CAPN1-227ENST00000533909 MAP3K2Q9Y2U5 619 aa17.12■□□□□ 0.33
CAPN1-227ENST00000533909 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-227ENST00000533909 PI4KAP2A4QPH2 592 aa17.11■□□□□ 0.33
CAPN1-227ENST00000533909 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-227ENST00000533909 KSR2Q6VAB6 950 aa17.11■□□□□ 0.33
CAPN1-227ENST00000533909 PI4KAP1Q8N8J0 262 aa17.11■□□□□ 0.33
CAPN1-227ENST00000533909 RBM17Q96I25 401 aaKnown RBP17.11■□□□□ 0.33
CAPN1-227ENST00000533909 ISCA1Q9BUE6 129 aa17.11■□□□□ 0.33
CAPN1-227ENST00000533909 HCLS1P14317 486 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-227ENST00000533909 HSP90B1P14625 803 aaKnown RBP17.1■□□□□ 0.33
CAPN1-227ENST00000533909 FLIIQ13045 1269 aa17.1■□□□□ 0.33
CAPN1-227ENST00000533909 METTL22Q9BUU2 404 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-227ENST00000533909 TMX4Q9H1E5 349 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-227ENST00000533909 RIC1Q4ADV7 1423 aa17.1■□□□□ 0.33
CAPN1-227ENST00000533909 ARFGEF2Q9Y6D5 1785 aa17.1■□□□□ 0.33
CAPN1-227ENST00000533909 SLFN5Q08AF3 891 aa17.09■□□□□ 0.33
CAPN1-227ENST00000533909 TRIM28Q13263 835 aaKnown RBP17.09■□□□□ 0.33
CAPN1-227ENST00000533909 CRY2Q49AN0 593 aa17.09■□□□□ 0.33
CAPN1-227ENST00000533909 RTL5Q5HYW3 569 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-227ENST00000533909 SLC10A5Q5PT55 438 aa17.09■□□□□ 0.33
CAPN1-227ENST00000533909 C9orf131Q5VYM1 1079 aa17.09■□□□□ 0.33
CAPN1-227ENST00000533909 ZNF784Q8NCA9 323 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-227ENST00000533909 CWC25Q9NXE8 425 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-227ENST00000533909 G2E3Q7L622 706 aa17.08■□□□□ 0.32
CAPN1-227ENST00000533909 CCDC191Q8NCU4 936 aa17.08■□□□□ 0.32
CAPN1-227ENST00000533909 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
CAPN1-227ENST00000533909 RNF181Q9P0P0 153 aa17.08■□□□□ 0.32
CAPN1-227ENST00000533909 TNRC6CQ9HCJ0 1690 aaKnown RBP17.07■□□□□ 0.32
CAPN1-227ENST00000533909 HNRNPUQ00839 825 aaKnown RBP eCLIP17.07■□□□□ 0.32
CAPN1-227ENST00000533909 RASSF7Q02833 373 aa17.07■□□□□ 0.32
CAPN1-227ENST00000533909 CCDC93Q567U6 631 aa17.07■□□□□ 0.32
CAPN1-227ENST00000533909 CACNA1SQ13698 1873 aa17.06■□□□□ 0.32
CAPN1-227ENST00000533909 LMNB1P20700 586 aa17.06■□□□□ 0.32
CAPN1-227ENST00000533909 HOXA10P31260 410 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-227ENST00000533909 DDX46Q7L014 1031 aaKnown RBP17.06■□□□□ 0.32
CAPN1-227ENST00000533909 SYNE4Q8N205 404 aa17.06■□□□□ 0.32
CAPN1-227ENST00000533909 ZBTB38Q8NAP3 1195 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-227ENST00000533909 CDCA7LQ96GN5 454 aa17.06■□□□□ 0.32
CAPN1-227ENST00000533909 TAOK3Q9H2K8 898 aa17.06■□□□□ 0.32
CAPN1-227ENST00000533909 ADCY9O60503 1353 aa17.05■□□□□ 0.32
CAPN1-227ENST00000533909 IRS4O14654 1257 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-227ENST00000533909 C3orf67Q6ZVT6 689 aa17.05■□□□□ 0.32
CAPN1-227ENST00000533909 ZNF526Q8TF50 670 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-227ENST00000533909 DNAAF4Q8WXU2 420 aa17.05■□□□□ 0.32
CAPN1-227ENST00000533909 CRAMP1Q96RY5 1269 aa17.05■□□□□ 0.32
CAPN1-227ENST00000533909 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
CAPN1-227ENST00000533909 CACNA1FO60840 1977 aa17.04■□□□□ 0.32
CAPN1-227ENST00000533909 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-227ENST00000533909 RTKN2Q8IZC4 609 aa17.04■□□□□ 0.32
CAPN1-227ENST00000533909 GPBP1L1Q9HC44 474 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-227ENST00000533909 NFKBIEO00221 500 aa17.03■□□□□ 0.32
CAPN1-227ENST00000533909 PCCAP05165 728 aaPredicted RBP17.03■□□□□ 0.32
CAPN1-227ENST00000533909 CC2D2BQ6DHV5 1058 aa17.03■□□□□ 0.32
CAPN1-227ENST00000533909 CWF19L2Q2TBE0 894 aaKnown RBP17.02■□□□□ 0.32
CAPN1-227ENST00000533909 ABCC4O15439 1325 aa17.01■□□□□ 0.31
CAPN1-227ENST00000533909 NEURL1BA8MQ27 555 aa17.01■□□□□ 0.31
CAPN1-227ENST00000533909 BBOX1O75936 387 aa17.01■□□□□ 0.31
CAPN1-227ENST00000533909 IGKV5-2P06315 115 aa17.01■□□□□ 0.31
CAPN1-227ENST00000533909 GRIPAP1Q4V328 841 aa17.01■□□□□ 0.31
CAPN1-227ENST00000533909 LINS1Q8NG48 757 aa17.01■□□□□ 0.31
CAPN1-227ENST00000533909 C7orf43Q8WVR3 580 aa17.01■□□□□ 0.31
CAPN1-227ENST00000533909 JARID2Q92833 1246 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-227ENST00000533909 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
CAPN1-227ENST00000533909 CT47B1P0C2W7 299 aaPredicted RBP17■□□□□ 0.31
CAPN1-227ENST00000533909 FKBP4Q02790 459 aaKnown RBP eCLIP17■□□□□ 0.31
CAPN1-227ENST00000533909 CCDC152Q4G0S7 254 aa17■□□□□ 0.31
CAPN1-227ENST00000533909 SLC4A10Q6U841 1118 aa17■□□□□ 0.31
CAPN1-227ENST00000533909 OLFM4Q6UX06 510 aa17■□□□□ 0.31
CAPN1-227ENST00000533909 SMC4Q9NTJ3 1288 aa17■□□□□ 0.31
CAPN1-227ENST00000533909 F6X3S4 739 aa16.99■□□□□ 0.31
CAPN1-227ENST00000533909 PDE8AO60658 829 aa16.99■□□□□ 0.31
CAPN1-227ENST00000533909 GRAPQ13588 217 aa16.99■□□□□ 0.31
CAPN1-227ENST00000533909 SF3B3Q15393 1217 aaKnown RBP16.99■□□□□ 0.31
CAPN1-227ENST00000533909 UBE3BQ7Z3V4 1068 aa16.99■□□□□ 0.31
CAPN1-227ENST00000533909 GRAPLQ8TC17 118 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-227ENST00000533909 SSH1Q8WYL5 1049 aa16.99■□□□□ 0.31
CAPN1-227ENST00000533909 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
CAPN1-227ENST00000533909 KDM2BQ8NHM5 1336 aa16.98■□□□□ 0.31
CAPN1-227ENST00000533909 ZC3H4Q9UPT8 1303 aaKnown RBP16.98■□□□□ 0.31
CAPN1-227ENST00000533909 GCKRQ14397 625 aa16.98■□□□□ 0.31
CAPN1-227ENST00000533909 ALDH1L2Q3SY69 923 aa16.98■□□□□ 0.31
CAPN1-227ENST00000533909 TMC4Q7Z404 712 aa16.98■□□□□ 0.31
CAPN1-227ENST00000533909 TRMT2AQ8IZ69 625 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms