RNA–Protein interactions for RNA: ENST00000533738.6

NUCB2-216, Transcript of nucleobindin 2, humanhuman

TSL 1 (best)

Gene NUCB2, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-216ENST00000533738 PRELPP51888 382 aa15.37■□□□□ 0.05
NUCB2-216ENST00000533738 ANKRD13DQ6ZTN6 518 aa15.37■□□□□ 0.05
NUCB2-216ENST00000533738 C3orf67Q6ZVT6 689 aa15.37■□□□□ 0.05
NUCB2-216ENST00000533738 UTP14AQ9BVJ6 771 aaKnown RBP15.37■□□□□ 0.05
NUCB2-216ENST00000533738 RNF181Q9P0P0 153 aa15.37■□□□□ 0.05
NUCB2-216ENST00000533738 SLX4Q8IY92 1834 aa15.36■□□□□ 0.05
NUCB2-216ENST00000533738 TWISTNBQ3B726 338 aaPredicted RBP15.36■□□□□ 0.05
NUCB2-216ENST00000533738 CCDC30Q5VVM6 783 aa15.36■□□□□ 0.05
NUCB2-216ENST00000533738 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
NUCB2-216ENST00000533738 GOLGA2Q08379 1002 aa15.35■□□□□ 0.05
NUCB2-216ENST00000533738 C7orf43Q8WVR3 580 aa15.35■□□□□ 0.05
NUCB2-216ENST00000533738 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
NUCB2-216ENST00000533738 ISCA1Q9BUE6 129 aa15.35■□□□□ 0.05
NUCB2-216ENST00000533738 GPBP1L1Q9HC44 474 aaPredicted RBP15.35■□□□□ 0.05
NUCB2-216ENST00000533738 RNF123Q5XPI4 1314 aa15.35■□□□□ 0.05
NUCB2-216ENST00000533738 CACNA1SQ13698 1873 aa15.35■□□□□ 0.05
NUCB2-216ENST00000533738 ATP5J2-PTCD1G3V325 749 aa15.34■□□□□ 0.05
NUCB2-216ENST00000533738 TCERG1O14776 1098 aaKnown RBP15.34■□□□□ 0.05
NUCB2-216ENST00000533738 SYNE4Q8N205 404 aa15.34■□□□□ 0.05
NUCB2-216ENST00000533738 CHMP4AQ9BY43 222 aa15.34■□□□□ 0.05
NUCB2-216ENST00000533738 CCER2I3L3R5 266 aa15.33■□□□□ 0.04
NUCB2-216ENST00000533738 LMNB1P20700 586 aa15.33■□□□□ 0.04
NUCB2-216ENST00000533738 SLC10A5Q5PT55 438 aa15.33■□□□□ 0.04
NUCB2-216ENST00000533738 OLFM4Q6UX06 510 aa15.33■□□□□ 0.04
NUCB2-216ENST00000533738 RIC3Q7Z5B4 369 aa15.33■□□□□ 0.04
NUCB2-216ENST00000533738 RPGRQ92834 1020 aaKnown RBP15.33■□□□□ 0.04
NUCB2-216ENST00000533738 TRMT112Q9UI30 125 aaKnown RBP15.33■□□□□ 0.04
NUCB2-216ENST00000533738 ZNF521Q96K83 1311 aa15.33■□□□□ 0.04
NUCB2-216ENST00000533738 SBF1O95248 1867 aa15.33■□□□□ 0.04
NUCB2-216ENST00000533738 FER1L6Q2WGJ9 1857 aa15.32■□□□□ 0.04
NUCB2-216ENST00000533738 HCLS1P14317 486 aaPredicted RBP15.32■□□□□ 0.04
NUCB2-216ENST00000533738 ALDH1B1P30837 517 aa15.32■□□□□ 0.04
NUCB2-216ENST00000533738 HOXA10P31260 410 aaPredicted RBP15.32■□□□□ 0.04
NUCB2-216ENST00000533738 EXOSC9Q06265 439 aaKnown RBP15.32■□□□□ 0.04
NUCB2-216ENST00000533738 SOGA3Q5TF21 947 aa15.32■□□□□ 0.04
NUCB2-216ENST00000533738 STK31Q9BXU1 1019 aa15.32■□□□□ 0.04
NUCB2-216ENST00000533738 SH3TC1Q8TE82 1336 aa15.32■□□□□ 0.04
NUCB2-216ENST00000533738 LTBP3Q9NS15 1303 aa15.32■□□□□ 0.04
NUCB2-216ENST00000533738 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
NUCB2-216ENST00000533738 SLC51AQ86UW1 340 aa15.31■□□□□ 0.04
NUCB2-216ENST00000533738 RBM17Q96I25 401 aaKnown RBP15.31■□□□□ 0.04
NUCB2-216ENST00000533738 NLRP3Q96P20 1036 aa15.31■□□□□ 0.04
NUCB2-216ENST00000533738 TAOK3Q9H2K8 898 aa15.31■□□□□ 0.04
NUCB2-216ENST00000533738 MYH16Q9H6N6 1097 aa15.31■□□□□ 0.04
NUCB2-216ENST00000533738 VAMP4O75379 141 aa15.3■□□□□ 0.04
NUCB2-216ENST00000533738 DDX58O95786 925 aaKnown RBP15.3■□□□□ 0.04
NUCB2-216ENST00000533738 TRIM28Q13263 835 aaKnown RBP15.3■□□□□ 0.04
NUCB2-216ENST00000533738 G2E3Q7L622 706 aa15.3■□□□□ 0.04
NUCB2-216ENST00000533738 TIAM2Q8IVF5 1701 aa15.3■□□□□ 0.04
NUCB2-216ENST00000533738 SNED1Q8TER0 1413 aa15.3■□□□□ 0.04
NUCB2-216ENST00000533738 MYD88Q99836 296 aa15.3■□□□□ 0.04
NUCB2-216ENST00000533738 ZC3H4Q9UPT8 1303 aaKnown RBP15.29■□□□□ 0.04
NUCB2-216ENST00000533738 SLC4A2P04920 1241 aa15.29■□□□□ 0.04
NUCB2-216ENST00000533738 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
NUCB2-216ENST00000533738 FAM89AQ96GI7 184 aa15.29■□□□□ 0.04
NUCB2-216ENST00000533738 CRAMP1Q96RY5 1269 aa15.29■□□□□ 0.04
NUCB2-216ENST00000533738 MAP3K2Q9Y2U5 619 aa15.29■□□□□ 0.04
NUCB2-216ENST00000533738 LAMB2P55268 1798 aa15.29■□□□□ 0.04
NUCB2-216ENST00000533738 DDX60Q8IY21 1712 aaKnown RBP15.29■□□□□ 0.04
NUCB2-216ENST00000533738 ABCC4O15439 1325 aa15.28■□□□□ 0.04
NUCB2-216ENST00000533738 PI4KAP2A4QPH2 592 aa15.28■□□□□ 0.04
NUCB2-216ENST00000533738 KIF3CO14782 793 aa15.28■□□□□ 0.04
NUCB2-216ENST00000533738 PPEF1O14829 653 aaPredicted RBP15.28■□□□□ 0.04
NUCB2-216ENST00000533738 C1QTNF8P60827 252 aa15.28■□□□□ 0.04
NUCB2-216ENST00000533738 FKBP4Q02790 459 aaKnown RBP eCLIP15.28■□□□□ 0.04
NUCB2-216ENST00000533738 RTL5Q5HYW3 569 aaPredicted RBP15.28■□□□□ 0.04
NUCB2-216ENST00000533738 KSR2Q6VAB6 950 aa15.28■□□□□ 0.04
NUCB2-216ENST00000533738 PI4KAP1Q8N8J0 262 aa15.28■□□□□ 0.04
NUCB2-216ENST00000533738 METTL22Q9BUU2 404 aaPredicted RBP15.28■□□□□ 0.04
NUCB2-216ENST00000533738 NMRK2Q9NPI5 230 aa15.28■□□□□ 0.04
NUCB2-216ENST00000533738 RTKN2Q8IZC4 609 aa15.27■□□□□ 0.04
NUCB2-216ENST00000533738 KDM2BQ8NHM5 1336 aa15.26■□□□□ 0.03
NUCB2-216ENST00000533738 FLIIQ13045 1269 aa15.26■□□□□ 0.03
NUCB2-216ENST00000533738 ZBTB38Q8NAP3 1195 aaPredicted RBP15.26■□□□□ 0.03
NUCB2-216ENST00000533738 CCDC191Q8NCU4 936 aa15.26■□□□□ 0.03
NUCB2-216ENST00000533738 ZNF277Q9NRM2 450 aaPredicted RBP15.26■□□□□ 0.03
NUCB2-216ENST00000533738 IRS4O14654 1257 aaPredicted RBP15.25■□□□□ 0.03
NUCB2-216ENST00000533738 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
NUCB2-216ENST00000533738 DIEXFQ68CQ4 756 aaKnown RBP15.25■□□□□ 0.03
NUCB2-216ENST00000533738 CWC25Q9NXE8 425 aaPredicted RBP15.25■□□□□ 0.03
NUCB2-216ENST00000533738 GLTPD2A6NH11 291 aa15.24■□□□□ 0.03
NUCB2-216ENST00000533738 PCCAP05165 728 aaPredicted RBP15.24■□□□□ 0.03
NUCB2-216ENST00000533738 GRAPQ13588 217 aa15.24■□□□□ 0.03
NUCB2-216ENST00000533738 SF3B3Q15393 1217 aaKnown RBP15.24■□□□□ 0.03
NUCB2-216ENST00000533738 CC2D2BQ6DHV5 1058 aa15.24■□□□□ 0.03
NUCB2-216ENST00000533738 DDX46Q7L014 1031 aaKnown RBP15.24■□□□□ 0.03
NUCB2-216ENST00000533738 GRAPLQ8TC17 118 aaPredicted RBP15.24■□□□□ 0.03
NUCB2-216ENST00000533738 JARID2Q92833 1246 aaPredicted RBP15.24■□□□□ 0.03
NUCB2-216ENST00000533738 PSMD1Q99460 953 aa15.24■□□□□ 0.03
NUCB2-216ENST00000533738 ATP6V0A2Q9Y487 856 aa15.24■□□□□ 0.03
NUCB2-216ENST00000533738 CCDC88AQ3V6T2 1871 aa15.24■□□□□ 0.03
NUCB2-216ENST00000533738 COL4A1P02462 1669 aa15.23■□□□□ 0.03
NUCB2-216ENST00000533738 E9PSI1 815 aa15.23■□□□□ 0.03
NUCB2-216ENST00000533738 FKBP5Q13451 457 aaPredicted RBP15.23■□□□□ 0.03
NUCB2-216ENST00000533738 CWF19L2Q2TBE0 894 aaKnown RBP15.23■□□□□ 0.03
NUCB2-216ENST00000533738 MIER1Q8N108 512 aa15.23■□□□□ 0.03
NUCB2-216ENST00000533738 DICER1Q9UPY3 1922 aaKnown RBP15.23■□□□□ 0.03
NUCB2-216ENST00000533738 NEURL1BA8MQ27 555 aa15.22■□□□□ 0.03
NUCB2-216ENST00000533738 BBOX1O75936 387 aa15.22■□□□□ 0.03
NUCB2-216ENST00000533738 IARSP41252 1262 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms