RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 DPY19L2Q6NUT2 758 aa14.79□□□□□ -0.04
CLCF1-202ENST00000533438 TNS4Q8IZW8 715 aa14.79□□□□□ -0.04
CLCF1-202ENST00000533438 FKBP4Q02790 459 aaKnown RBP eCLIP14.78□□□□□ -0.04
CLCF1-202ENST00000533438 OLFM4Q6UX06 510 aa14.78□□□□□ -0.04
CLCF1-202ENST00000533438 PARP10Q53GL7 1025 aa14.77□□□□□ -0.05
CLCF1-202ENST00000533438 PPP1R42Q7Z4L9 355 aa14.77□□□□□ -0.05
CLCF1-202ENST00000533438 LAS1LQ9Y4W2 734 aaKnown RBP14.77□□□□□ -0.05
CLCF1-202ENST00000533438 SCN4AP35499 1836 aa14.76□□□□□ -0.05
CLCF1-202ENST00000533438 HOXB7P09629 217 aa14.76□□□□□ -0.05
CLCF1-202ENST00000533438 HOXA10P31260 410 aaPredicted RBP14.76□□□□□ -0.05
CLCF1-202ENST00000533438 DIEXFQ68CQ4 756 aaKnown RBP14.76□□□□□ -0.05
CLCF1-202ENST00000533438 COPS6Q7L5N1 327 aa14.76□□□□□ -0.05
CLCF1-202ENST00000533438 RTKN2Q8IZC4 609 aa14.76□□□□□ -0.05
CLCF1-202ENST00000533438 NECTIN2Q92692 538 aa14.76□□□□□ -0.05
CLCF1-202ENST00000533438 CFAP44Q96MT7 982 aa14.76□□□□□ -0.05
CLCF1-202ENST00000533438 DDX21Q9NR30 783 aaKnown RBP eCLIP14.76□□□□□ -0.05
CLCF1-202ENST00000533438 HSPA1AP0DMV8 641 aaKnown RBP14.75□□□□□ -0.05
CLCF1-202ENST00000533438 HSPA1BP0DMV9 641 aaKnown RBP14.75□□□□□ -0.05
CLCF1-202ENST00000533438 XAGE3Q8WTP9 111 aa14.75□□□□□ -0.05
CLCF1-202ENST00000533438 CREBZFQ9NS37 354 aa14.75□□□□□ -0.05
CLCF1-202ENST00000533438 RNF123Q5XPI4 1314 aa14.74□□□□□ -0.05
CLCF1-202ENST00000533438 DDNO94850 711 aaPredicted RBP14.74□□□□□ -0.05
CLCF1-202ENST00000533438 ZNF853P0CG23 659 aa14.74□□□□□ -0.05
CLCF1-202ENST00000533438 AIMP1Q12904 312 aaKnown RBP14.74□□□□□ -0.05
CLCF1-202ENST00000533438 SLC10A5Q5PT55 438 aa14.74□□□□□ -0.05
CLCF1-202ENST00000533438 C3orf67Q6ZVT6 689 aa14.74□□□□□ -0.05
CLCF1-202ENST00000533438 RPGRQ92834 1020 aaKnown RBP14.74□□□□□ -0.05
CLCF1-202ENST00000533438 PSMD1Q99460 953 aa14.74□□□□□ -0.05
CLCF1-202ENST00000533438 UTP14AQ9BVJ6 771 aaKnown RBP14.74□□□□□ -0.05
CLCF1-202ENST00000533438 ZNF277Q9NRM2 450 aaPredicted RBP14.74□□□□□ -0.05
CLCF1-202ENST00000533438 CHPF2Q9P2E5 772 aa14.74□□□□□ -0.05
CLCF1-202ENST00000533438 DDX60Q8IY21 1712 aaKnown RBP14.73□□□□□ -0.05
CLCF1-202ENST00000533438 APAF1O14727 1248 aa14.73□□□□□ -0.05
CLCF1-202ENST00000533438 TCIRG1Q13488 830 aa14.73□□□□□ -0.05
CLCF1-202ENST00000533438 HSP90AB3PQ58FF7 597 aa14.73□□□□□ -0.05
CLCF1-202ENST00000533438 HDGFL1Q5TGJ6 251 aa14.73□□□□□ -0.05
CLCF1-202ENST00000533438 CC2D2BQ6DHV5 1058 aa14.73□□□□□ -0.05
CLCF1-202ENST00000533438 CHADLQ6NUI6 762 aa14.73□□□□□ -0.05
CLCF1-202ENST00000533438 RBM17Q96I25 401 aaKnown RBP14.73□□□□□ -0.05
CLCF1-202ENST00000533438 L3MBTL3Q96JM7 780 aaPredicted RBP14.73□□□□□ -0.05
CLCF1-202ENST00000533438 CRAMP1Q96RY5 1269 aa14.73□□□□□ -0.05
CLCF1-202ENST00000533438 MBIPQ9NS73 344 aa14.73□□□□□ -0.05
CLCF1-202ENST00000533438 COL4A5P29400 1685 aa14.72□□□□□ -0.05
CLCF1-202ENST00000533438 IARSP41252 1262 aaKnown RBP14.72□□□□□ -0.05
CLCF1-202ENST00000533438 NLRP10Q86W26 655 aa14.72□□□□□ -0.05
CLCF1-202ENST00000533438 SYNE4Q8N205 404 aa14.72□□□□□ -0.05
CLCF1-202ENST00000533438 NLRP3Q96P20 1036 aa14.72□□□□□ -0.05
CLCF1-202ENST00000533438 PASKQ96RG2 1323 aa14.71□□□□□ -0.05
CLCF1-202ENST00000533438 ZNF541Q9H0D2 1346 aa14.71□□□□□ -0.05
CLCF1-202ENST00000533438 FZD9O00144 591 aa14.71□□□□□ -0.05
CLCF1-202ENST00000533438 DUSP27Q5VZP5 1158 aa14.71□□□□□ -0.05
CLCF1-202ENST00000533438 SLC51AQ86UW1 340 aa14.71□□□□□ -0.05
CLCF1-202ENST00000533438 IFT57Q9NWB7 429 aa14.71□□□□□ -0.05
CLCF1-202ENST00000533438 DBF4Q9UBU7 674 aaPredicted RBP14.71□□□□□ -0.05
CLCF1-202ENST00000533438 TAF1P21675 1872 aa14.71□□□□□ -0.05
CLCF1-202ENST00000533438 ADAMTSL1Q8N6G6 1762 aa14.7□□□□□ -0.06
CLCF1-202ENST00000533438 PPEF1O14829 653 aaPredicted RBP14.7□□□□□ -0.06
CLCF1-202ENST00000533438 GRIPAP1Q4V328 841 aa14.7□□□□□ -0.06
CLCF1-202ENST00000533438 CCDC184Q52MB2 194 aa14.7□□□□□ -0.06
CLCF1-202ENST00000533438 PLBD2Q8NHP8 589 aa14.7□□□□□ -0.06
CLCF1-202ENST00000533438 IQCA1LA6NCM1 817 aa14.69□□□□□ -0.06
CLCF1-202ENST00000533438 ITGBL1O95965 494 aaPredicted RBP14.69□□□□□ -0.06
CLCF1-202ENST00000533438 POTEIP0CG38 1075 aa14.69□□□□□ -0.06
CLCF1-202ENST00000533438 POTEJP0CG39 1038 aa14.69□□□□□ -0.06
CLCF1-202ENST00000533438 GNAI1P63096 354 aa14.69□□□□□ -0.06
CLCF1-202ENST00000533438 CALD1Q05682 793 aaKnown RBP14.69□□□□□ -0.06
CLCF1-202ENST00000533438 ANKRD13DQ6ZTN6 518 aa14.69□□□□□ -0.06
CLCF1-202ENST00000533438 PRDM10Q9NQV6 1147 aa14.69□□□□□ -0.06
CLCF1-202ENST00000533438 HYPKQ9NX55 129 aa14.69□□□□□ -0.06
CLCF1-202ENST00000533438 TRMT112Q9UI30 125 aaKnown RBP14.69□□□□□ -0.06
CLCF1-202ENST00000533438 ABCC4O15439 1325 aa14.68□□□□□ -0.06
CLCF1-202ENST00000533438 SH3TC1Q8TE82 1336 aa14.68□□□□□ -0.06
CLCF1-202ENST00000533438 HCLS1P14317 486 aaPredicted RBP14.68□□□□□ -0.06
CLCF1-202ENST00000533438 ISCA1Q9BUE6 129 aa14.68□□□□□ -0.06
CLCF1-202ENST00000533438 LRRC37AA6NMS7 1700 aa14.68□□□□□ -0.06
CLCF1-202ENST00000533438 LDHDQ86WU2 507 aa14.67□□□□□ -0.06
CLCF1-202ENST00000533438 TAF1DQ9H5J8 278 aaPredicted RBP14.67□□□□□ -0.06
CLCF1-202ENST00000533438 ATP6V0A2Q9Y487 856 aa14.67□□□□□ -0.06
CLCF1-202ENST00000533438 CNTNAP1P78357 1384 aa14.67□□□□□ -0.06
CLCF1-202ENST00000533438 LTBP1Q14766 1721 aa14.66□□□□□ -0.06
CLCF1-202ENST00000533438 TCERG1O14776 1098 aaKnown RBP14.66□□□□□ -0.06
CLCF1-202ENST00000533438 GPC2Q8N158 579 aa14.66□□□□□ -0.06
CLCF1-202ENST00000533438 JDP2Q8WYK2 163 aa14.66□□□□□ -0.06
CLCF1-202ENST00000533438 CAPN15O75808 1086 aa14.65□□□□□ -0.06
CLCF1-202ENST00000533438 BBOX1O75936 387 aa14.65□□□□□ -0.06
CLCF1-202ENST00000533438 TRIM28Q13263 835 aaKnown RBP14.65□□□□□ -0.06
CLCF1-202ENST00000533438 PHAXQ9H814 394 aaKnown RBP14.65□□□□□ -0.06
CLCF1-202ENST00000533438 HACL1Q9UJ83 578 aa14.65□□□□□ -0.06
CLCF1-202ENST00000533438 ATP5J2-PTCD1G3V325 749 aa14.64□□□□□ -0.07
CLCF1-202ENST00000533438 ELL2O00472 640 aaPredicted RBP14.64□□□□□ -0.07
CLCF1-202ENST00000533438 GRAPQ13588 217 aa14.64□□□□□ -0.07
CLCF1-202ENST00000533438 CCDC27Q2M243 656 aa14.64□□□□□ -0.07
CLCF1-202ENST00000533438 SP8Q8IXZ3 490 aa14.64□□□□□ -0.07
CLCF1-202ENST00000533438 LARGE2Q8N3Y3 721 aa14.64□□□□□ -0.07
CLCF1-202ENST00000533438 C8orf58Q8NAV2 365 aa14.64□□□□□ -0.07
CLCF1-202ENST00000533438 GRAPLQ8TC17 118 aaPredicted RBP14.64□□□□□ -0.07
CLCF1-202ENST00000533438 ZNF428Q96B54 188 aa14.64□□□□□ -0.07
CLCF1-202ENST00000533438 RTFDC1Q9BY42 306 aaPredicted RBP14.64□□□□□ -0.07
CLCF1-202ENST00000533438 VPS33BQ9H267 617 aa14.64□□□□□ -0.07
CLCF1-202ENST00000533438 WBP1LQ9NX94 342 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms