RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 TMX4Q9H1E5 349 aaPredicted RBP19.07■□□□□ 0.64
PUF60-221ENST00000533162 SH3TC1Q8TE82 1336 aa19.06■□□□□ 0.64
PUF60-221ENST00000533162 ZNF521Q96K83 1311 aa19.06■□□□□ 0.64
PUF60-221ENST00000533162 KIAA1551Q9HCM1 1747 aa19.06■□□□□ 0.64
PUF60-221ENST00000533162 TRIM28Q13263 835 aaKnown RBP19.06■□□□□ 0.64
PUF60-221ENST00000533162 SLC10A5Q5PT55 438 aa19.06■□□□□ 0.64
PUF60-221ENST00000533162 PRPF40BQ6NWY9 871 aaKnown RBP19.05■□□□□ 0.64
PUF60-221ENST00000533162 KSR2Q6VAB6 950 aa19.05■□□□□ 0.64
PUF60-221ENST00000533162 ISCA1Q9BUE6 129 aa19.05■□□□□ 0.64
PUF60-221ENST00000533162 RIC1Q4ADV7 1423 aa19.05■□□□□ 0.64
PUF60-221ENST00000533162 NUP98P52948 1817 aa19.04■□□□□ 0.64
PUF60-221ENST00000533162 ATP5J2-PTCD1G3V325 749 aa19.04■□□□□ 0.64
PUF60-221ENST00000533162 C21orf2O43822 256 aa19.04■□□□□ 0.64
PUF60-221ENST00000533162 CRY2Q49AN0 593 aa19.04■□□□□ 0.64
PUF60-221ENST00000533162 ZNF784Q8NCA9 323 aaPredicted RBP19.04■□□□□ 0.64
PUF60-221ENST00000533162 SPINK5Q9NQ38 1064 aaPredicted RBP19.04■□□□□ 0.64
PUF60-221ENST00000533162 CHD4Q14839 1912 aa19.04■□□□□ 0.64
PUF60-221ENST00000533162 CCDC191Q8NCU4 936 aa19.03■□□□□ 0.64
PUF60-221ENST00000533162 MYD88Q99836 296 aa19.03■□□□□ 0.64
PUF60-221ENST00000533162 METTL22Q9BUU2 404 aaPredicted RBP19.03■□□□□ 0.64
PUF60-221ENST00000533162 ZNF219Q9P2Y4 722 aaPredicted RBP19.03■□□□□ 0.64
PUF60-221ENST00000533162 MAP3K2Q9Y2U5 619 aa19.03■□□□□ 0.64
PUF60-221ENST00000533162 PI4KAP2A4QPH2 592 aa19.02■□□□□ 0.64
PUF60-221ENST00000533162 TCERG1O14776 1098 aaKnown RBP19.02■□□□□ 0.64
PUF60-221ENST00000533162 FLIIQ13045 1269 aa19.02■□□□□ 0.64
PUF60-221ENST00000533162 FKBP5Q13451 457 aaPredicted RBP19.02■□□□□ 0.64
PUF60-221ENST00000533162 GRIPAP1Q4V328 841 aa19.02■□□□□ 0.64
PUF60-221ENST00000533162 PI4KAP1Q8N8J0 262 aa19.02■□□□□ 0.64
PUF60-221ENST00000533162 CWC25Q9NXE8 425 aaPredicted RBP19.02■□□□□ 0.64
PUF60-221ENST00000533162 ABCC12Q96J65 1359 aa19.02■□□□□ 0.64
PUF60-221ENST00000533162 LMNB1P20700 586 aa19.01■□□□□ 0.63
PUF60-221ENST00000533162 HOXA10P31260 410 aaPredicted RBP19.01■□□□□ 0.63
PUF60-221ENST00000533162 CCDC93Q567U6 631 aa19.01■□□□□ 0.63
PUF60-221ENST00000533162 C9orf131Q5VYM1 1079 aa19.01■□□□□ 0.63
PUF60-221ENST00000533162 CC2D2BQ6DHV5 1058 aa19.01■□□□□ 0.63
PUF60-221ENST00000533162 RTKN2Q8IZC4 609 aa19.01■□□□□ 0.63
PUF60-221ENST00000533162 ZBTB38Q8NAP3 1195 aaPredicted RBP19.01■□□□□ 0.63
PUF60-221ENST00000533162 CRAMP1Q96RY5 1269 aa19.01■□□□□ 0.63
PUF60-221ENST00000533162 RNF181Q9P0P0 153 aa19.01■□□□□ 0.63
PUF60-221ENST00000533162 SLFN5Q08AF3 891 aa19■□□□□ 0.63
PUF60-221ENST00000533162 DDX46Q7L014 1031 aaKnown RBP19■□□□□ 0.63
PUF60-221ENST00000533162 ZNF428Q96B54 188 aa19■□□□□ 0.63
PUF60-221ENST00000533162 BRCA1P38398 1863 aaKnown RBP18.99■□□□□ 0.63
PUF60-221ENST00000533162 HCLS1P14317 486 aaPredicted RBP18.99■□□□□ 0.63
PUF60-221ENST00000533162 FAM89AQ96GI7 184 aa18.99■□□□□ 0.63
PUF60-221ENST00000533162 TAOK3Q9H2K8 898 aa18.99■□□□□ 0.63
PUF60-221ENST00000533162 ARFGEF1Q9Y6D6 1849 aa18.99■□□□□ 0.63
PUF60-221ENST00000533162 DLEC1Q9Y238 1755 aa18.98■□□□□ 0.63
PUF60-221ENST00000533162 GPBP1L1Q9HC44 474 aaPredicted RBP18.98■□□□□ 0.63
PUF60-221ENST00000533162 ANKRD31Q8N7Z5 1873 aa18.98■□□□□ 0.63
PUF60-221ENST00000533162 ZC3H4Q9UPT8 1303 aaKnown RBP18.98■□□□□ 0.63
PUF60-221ENST00000533162 IRS4O14654 1257 aaPredicted RBP18.97■□□□□ 0.63
PUF60-221ENST00000533162 BBOX1O75936 387 aa18.97■□□□□ 0.63
PUF60-221ENST00000533162 PCCAP05165 728 aaPredicted RBP18.97■□□□□ 0.63
PUF60-221ENST00000533162 DNAAF4Q8WXU2 420 aa18.97■□□□□ 0.63
PUF60-221ENST00000533162 LTBP3Q9NS15 1303 aa18.97■□□□□ 0.63
PUF60-221ENST00000533162 PPEF1O14829 653 aaPredicted RBP18.96■□□□□ 0.63
PUF60-221ENST00000533162 CT47B1P0C2W7 299 aaPredicted RBP18.96■□□□□ 0.63
PUF60-221ENST00000533162 RASSF7Q02833 373 aa18.96■□□□□ 0.63
PUF60-221ENST00000533162 G2E3Q7L622 706 aa18.96■□□□□ 0.63
PUF60-221ENST00000533162 TMC4Q7Z404 712 aa18.96■□□□□ 0.63
PUF60-221ENST00000533162 C7orf43Q8WVR3 580 aa18.96■□□□□ 0.63
PUF60-221ENST00000533162 RTL5Q5HYW3 569 aaPredicted RBP18.95■□□□□ 0.62
PUF60-221ENST00000533162 ADCY9O60503 1353 aa18.94■□□□□ 0.62
PUF60-221ENST00000533162 NFKBIEO00221 500 aa18.94■□□□□ 0.62
PUF60-221ENST00000533162 FKBP4Q02790 459 aaKnown RBP eCLIP18.94■□□□□ 0.624e-12■■■■□ 23.5
PUF60-221ENST00000533162 SF3B3Q15393 1217 aaKnown RBP18.94■□□□□ 0.62
PUF60-221ENST00000533162 SYNE4Q8N205 404 aa18.94■□□□□ 0.62
PUF60-221ENST00000533162 KDM2BQ8NHM5 1336 aa18.94■□□□□ 0.62
PUF60-221ENST00000533162 ANKRD36CQ5JPF3 1778 aa18.93■□□□□ 0.62
PUF60-221ENST00000533162 PDE8AO60658 829 aa18.93■□□□□ 0.62
PUF60-221ENST00000533162 HNRNPUQ00839 825 aaKnown RBP eCLIP18.93■□□□□ 0.62
PUF60-221ENST00000533162 GRAPQ13588 217 aa18.93■□□□□ 0.62
PUF60-221ENST00000533162 CCDC152Q4G0S7 254 aa18.93■□□□□ 0.62
PUF60-221ENST00000533162 DPY19L2Q6NUT2 758 aa18.93■□□□□ 0.62
PUF60-221ENST00000533162 LINS1Q8NG48 757 aa18.93■□□□□ 0.62
PUF60-221ENST00000533162 GRAPLQ8TC17 118 aaPredicted RBP18.93■□□□□ 0.62
PUF60-221ENST00000533162 ZNF526Q8TF50 670 aaPredicted RBP18.93■□□□□ 0.62
PUF60-221ENST00000533162 COL11A2P13942 1736 aaPredicted RBP18.93■□□□□ 0.62
PUF60-221ENST00000533162 NEURL1BA8MQ27 555 aa18.92■□□□□ 0.62
PUF60-221ENST00000533162 ALDH1L2Q3SY69 923 aa18.92■□□□□ 0.62
PUF60-221ENST00000533162 C3orf67Q6ZVT6 689 aa18.92■□□□□ 0.62
PUF60-221ENST00000533162 TRMT2AQ8IZ69 625 aaKnown RBP18.92■□□□□ 0.62
PUF60-221ENST00000533162 CDCA7LQ96GN5 454 aa18.92■□□□□ 0.62
PUF60-221ENST00000533162 ATP6V0A2Q9Y487 856 aa18.92■□□□□ 0.62
PUF60-221ENST00000533162 ABCC4O15439 1325 aa18.92■□□□□ 0.62
PUF60-221ENST00000533162 IGKV5-2P06315 115 aa18.91■□□□□ 0.62
PUF60-221ENST00000533162 SUPT20HQ8NEM7 779 aa18.91■□□□□ 0.62
PUF60-221ENST00000533162 PSMD1Q99460 953 aa18.91■□□□□ 0.62
PUF60-221ENST00000533162 CDHR2Q9BYE9 1310 aa18.91■□□□□ 0.62
PUF60-221ENST00000533162 ARFGEF2Q9Y6D5 1785 aa18.91■□□□□ 0.62
PUF60-221ENST00000533162 CWF19L2Q2TBE0 894 aaKnown RBP18.9■□□□□ 0.62
PUF60-221ENST00000533162 SP8Q8IXZ3 490 aa18.9■□□□□ 0.62
PUF60-221ENST00000533162 PTPRCP08575 1304 aa18.9■□□□□ 0.62
PUF60-221ENST00000533162 GCKRQ14397 625 aa18.89■□□□□ 0.61
PUF60-221ENST00000533162 VPS33BQ9H267 617 aa18.89■□□□□ 0.61
PUF60-221ENST00000533162 TNRC6CQ9HCJ0 1690 aaKnown RBP18.89■□□□□ 0.61
PUF60-221ENST00000533162 SLX4Q8IY92 1834 aa18.88■□□□□ 0.61
PUF60-221ENST00000533162 H7C1W4 665 aa18.88■□□□□ 0.61
PUF60-221ENST00000533162 SLC4A10Q6U841 1118 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms