RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 UBN2Q6ZU65 1347 aa25.34■■□□□ 1.65
GSDMD-212ENST00000533063 APBA3O96018 575 aa25.33■■□□□ 1.65
GSDMD-212ENST00000533063 SRGAP3O43295 1099 aa25.32■■□□□ 1.64
GSDMD-212ENST00000533063 HDAC5Q9UQL6 1122 aa25.32■■□□□ 1.64
GSDMD-212ENST00000533063 RTL5Q5HYW3 569 aaPredicted RBP25.31■■□□□ 1.64
GSDMD-212ENST00000533063 RTCBQ9Y3I0 505 aaKnown RBP25.31■■□□□ 1.64
GSDMD-212ENST00000533063 PELP1Q8IZL8 1130 aaKnown RBP25.3■■□□□ 1.64
GSDMD-212ENST00000533063 BCL2L12Q9HB09 334 aa25.3■■□□□ 1.64
GSDMD-212ENST00000533063 PDE4AP27815 886 aa25.3■■□□□ 1.64
GSDMD-212ENST00000533063 RABL6Q3YEC7 729 aaPredicted RBP25.3■■□□□ 1.64
GSDMD-212ENST00000533063 FOXO4P98177 505 aa25.29■■□□□ 1.64
GSDMD-212ENST00000533063 CHD1LQ86WJ1 897 aa25.29■■□□□ 1.64
GSDMD-212ENST00000533063 ARHGEF1Q92888 912 aaKnown RBP25.29■■□□□ 1.64
GSDMD-212ENST00000533063 PCCAP05165 728 aaPredicted RBP25.28■■□□□ 1.64
GSDMD-212ENST00000533063 RGS3P49796 1198 aa25.28■■□□□ 1.64
GSDMD-212ENST00000533063 ZBTB38Q8NAP3 1195 aaPredicted RBP25.28■■□□□ 1.64
GSDMD-212ENST00000533063 AK7Q96M32 723 aa25.28■■□□□ 1.64
GSDMD-212ENST00000533063 NARFQ9UHQ1 456 aa25.28■■□□□ 1.64
GSDMD-212ENST00000533063 ANKRD45Q5TZF3 282 aa25.28■■□□□ 1.64
GSDMD-212ENST00000533063 CLEC4GQ6UXB4 293 aa25.28■■□□□ 1.64
GSDMD-212ENST00000533063 SYNE4Q8N205 404 aa25.28■■□□□ 1.64
GSDMD-212ENST00000533063 FAM89AQ96GI7 184 aa25.28■■□□□ 1.64
GSDMD-212ENST00000533063 SRP68Q9UHB9 627 aaKnown RBP25.28■■□□□ 1.64
GSDMD-212ENST00000533063 EXOC6BQ9Y2D4 811 aa25.28■■□□□ 1.64
GSDMD-212ENST00000533063 LNPKQ9C0E8 428 aa25.27■■□□□ 1.64
GSDMD-212ENST00000533063 RGL2O15211 777 aa25.26■■□□□ 1.63
GSDMD-212ENST00000533063 TUBGCP6Q96RT7 1819 aa25.26■■□□□ 1.63
GSDMD-212ENST00000533063 MYH3P11055 1940 aa25.26■■□□□ 1.63
GSDMD-212ENST00000533063 USPL1Q5W0Q7 1092 aa25.25■■□□□ 1.63
GSDMD-212ENST00000533063 PHF14O94880 888 aa25.24■■□□□ 1.63
GSDMD-212ENST00000533063 SUSD4Q5VX71 490 aa25.24■■□□□ 1.63
GSDMD-212ENST00000533063 NIP7Q9Y221 180 aaKnown RBP eCLIP25.24■■□□□ 1.63
GSDMD-212ENST00000533063 ZNF652Q9Y2D9 606 aa25.24■■□□□ 1.63
GSDMD-212ENST00000533063 CDHR2Q9BYE9 1310 aa25.24■■□□□ 1.63
GSDMD-212ENST00000533063 COL24A1Q17RW2 1714 aa25.24■■□□□ 1.63
GSDMD-212ENST00000533063 TRAPPC3LQ5T215 181 aa25.23■■□□□ 1.63
GSDMD-212ENST00000533063 DDX60Q8IY21 1712 aaKnown RBP25.23■■□□□ 1.63
GSDMD-212ENST00000533063 USP42Q9H9J4 1324 aaKnown RBP25.23■■□□□ 1.63
GSDMD-212ENST00000533063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.23■■□□□ 1.63
GSDMD-212ENST00000533063 PLA2G12BQ9BX93 195 aa25.23■■□□□ 1.63
GSDMD-212ENST00000533063 TRMT112Q9UI30 125 aaKnown RBP25.23■■□□□ 1.63
GSDMD-212ENST00000533063 PA2G4Q9UQ80 394 aaKnown RBP25.23■■□□□ 1.63
GSDMD-212ENST00000533063 NOP58Q9Y2X3 529 aaKnown RBP25.23■■□□□ 1.63
GSDMD-212ENST00000533063 APBB1O00213 710 aa25.22■■□□□ 1.63
GSDMD-212ENST00000533063 SMARCA5O60264 1052 aaPredicted RBP25.22■■□□□ 1.63
GSDMD-212ENST00000533063 ADRA2BP18089 450 aa25.22■■□□□ 1.63
GSDMD-212ENST00000533063 RFX5P48382 616 aaPredicted RBP25.22■■□□□ 1.63
GSDMD-212ENST00000533063 LMBR1LQ6UX01 489 aa25.22■■□□□ 1.63
GSDMD-212ENST00000533063 SURF6O75683 361 aaKnown RBP25.21■■□□□ 1.63
GSDMD-212ENST00000533063 ZNF827Q17R98 1081 aa25.21■■□□□ 1.63
GSDMD-212ENST00000533063 LAMB2P55268 1798 aa25.21■■□□□ 1.63
GSDMD-212ENST00000533063 PARP10Q53GL7 1025 aa25.21■■□□□ 1.63
GSDMD-212ENST00000533063 TBC1D9BQ66K14 1250 aa25.21■■□□□ 1.63
GSDMD-212ENST00000533063 AKT1S1Q96B36 256 aa25.21■■□□□ 1.63
GSDMD-212ENST00000533063 ZPR1O75312 459 aa25.2■■□□□ 1.62
GSDMD-212ENST00000533063 NTSR2O95665 410 aa25.2■■□□□ 1.62
GSDMD-212ENST00000533063 SSFA2P28290 1259 aa25.2■■□□□ 1.62
GSDMD-212ENST00000533063 KLHDC4Q8TBB5 520 aa25.2■■□□□ 1.62
GSDMD-212ENST00000533063 RFC4P35249 363 aa25.19■■□□□ 1.62
GSDMD-212ENST00000533063 CAMKK2Q96RR4 588 aa25.19■■□□□ 1.62
GSDMD-212ENST00000533063 PTPN12Q05209 780 aaKnown RBP25.18■■□□□ 1.62
GSDMD-212ENST00000533063 C16orf71Q8IYS4 520 aaPredicted RBP25.18■■□□□ 1.62
GSDMD-212ENST00000533063 UTP14AQ9BVJ6 771 aaKnown RBP25.18■■□□□ 1.62
GSDMD-212ENST00000533063 CASZ1Q86V15 1759 aa25.18■■□□□ 1.62
GSDMD-212ENST00000533063 FAM177BA6PVY3 158 aa25.17■■□□□ 1.62
GSDMD-212ENST00000533063 IRS4O14654 1257 aaPredicted RBP25.17■■□□□ 1.62
GSDMD-212ENST00000533063 CSF1RP07333 972 aa25.17■■□□□ 1.62
GSDMD-212ENST00000533063 EN1Q05925 392 aaPredicted RBP25.17■■□□□ 1.62
GSDMD-212ENST00000533063 LRRCC1Q9C099 1032 aa25.17■■□□□ 1.62
GSDMD-212ENST00000533063 EZH2Q15910 746 aaKnown RBP25.16■■□□□ 1.62
GSDMD-212ENST00000533063 OTUD7AQ8TE49 926 aaPredicted RBP25.16■■□□□ 1.62
GSDMD-212ENST00000533063 COPRSQ9NQ92 184 aa25.16■■□□□ 1.62
GSDMD-212ENST00000533063 SH3TC1Q8TE82 1336 aa25.16■■□□□ 1.62
GSDMD-212ENST00000533063 RAB11FIP3O75154 756 aa25.16■■□□□ 1.62
GSDMD-212ENST00000533063 HMGB2P26583 209 aaKnown RBP25.16■■□□□ 1.62
GSDMD-212ENST00000533063 BICDL1Q6ZP65 573 aa25.15■■□□□ 1.62
GSDMD-212ENST00000533063 RHPN1Q8TCX5 695 aa25.15■■□□□ 1.62
GSDMD-212ENST00000533063 NUTM1Q86Y26 1132 aa25.14■■□□□ 1.62
GSDMD-212ENST00000533063 TTLL11Q8NHH1 800 aa25.14■■□□□ 1.61
GSDMD-212ENST00000533063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.14■■□□□ 1.61
GSDMD-212ENST00000533063 GYS1P13807 737 aa25.13■■□□□ 1.61
GSDMD-212ENST00000533063 HCLS1P14317 486 aaPredicted RBP25.13■■□□□ 1.61
GSDMD-212ENST00000533063 CTSWP56202 376 aa25.13■■□□□ 1.61
GSDMD-212ENST00000533063 FAM161AQ3B820 660 aa25.13■■□□□ 1.61
GSDMD-212ENST00000533063 PLEKHM2Q8IWE5 1019 aa25.13■■□□□ 1.61
GSDMD-212ENST00000533063 CHMP3Q9Y3E7 222 aa25.13■■□□□ 1.61
GSDMD-212ENST00000533063 PDE8AO60658 829 aa25.12■■□□□ 1.61
GSDMD-212ENST00000533063 SASH1O94885 1247 aa25.12■■□□□ 1.61
GSDMD-212ENST00000533063 HSP90AB4PQ58FF6 505 aa25.12■■□□□ 1.61
GSDMD-212ENST00000533063 SIL1Q9H173 461 aa25.12■■□□□ 1.61
GSDMD-212ENST00000533063 TFCP2L1Q9NZI6 479 aa25.12■■□□□ 1.61
GSDMD-212ENST00000533063 SALL3Q9BXA9 1300 aa25.12■■□□□ 1.61
GSDMD-212ENST00000533063 KIF1BPQ96EK5 621 aa25.12■■□□□ 1.61
GSDMD-212ENST00000533063 SETDB2Q96T68 719 aa25.12■■□□□ 1.61
GSDMD-212ENST00000533063 BCL11AQ9H165 835 aa25.12■■□□□ 1.61
GSDMD-212ENST00000533063 IL1RAPL2Q9NP60 686 aa25.12■■□□□ 1.61
GSDMD-212ENST00000533063 CCDC85AQ96PX6 553 aaPredicted RBP25.11■■□□□ 1.61
GSDMD-212ENST00000533063 NFIXQ14938 502 aa25.1■■□□□ 1.61
GSDMD-212ENST00000533063 GREM2Q9H772 168 aa25.1■■□□□ 1.61
GSDMD-212ENST00000533063 ANO8Q9HCE9 1232 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms