RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 C3orf67Q6ZVT6 689 aa22.46■■□□□ 1.19
RPUSD4-207ENST00000532800 CCDC146Q8IYE0 955 aa22.46■■□□□ 1.19
RPUSD4-207ENST00000532800 RPGRQ92834 1020 aaKnown RBP22.46■■□□□ 1.19
RPUSD4-207ENST00000532800 TAF1DQ9H5J8 278 aaPredicted RBP22.46■■□□□ 1.19
RPUSD4-207ENST00000532800 ANKRD36CQ5JPF3 1778 aa22.44■■□□□ 1.18
RPUSD4-207ENST00000532800 PSMD1Q99460 953 aa22.44■■□□□ 1.18
RPUSD4-207ENST00000532800 MYBBP1AQ9BQG0 1328 aaKnown RBP22.44■■□□□ 1.18
RPUSD4-207ENST00000532800 FZD9O00144 591 aa22.43■■□□□ 1.18
RPUSD4-207ENST00000532800 HOXA10P31260 410 aaPredicted RBP22.43■■□□□ 1.18
RPUSD4-207ENST00000532800 LMOD3Q0VAK6 560 aa22.43■■□□□ 1.18
RPUSD4-207ENST00000532800 COL13A1Q5TAT6 717 aaPredicted RBP22.43■■□□□ 1.18
RPUSD4-207ENST00000532800 LDHDQ86WU2 507 aa22.43■■□□□ 1.18
RPUSD4-207ENST00000532800 NECTIN2Q92692 538 aa22.43■■□□□ 1.18
RPUSD4-207ENST00000532800 ADAMTSL1Q8N6G6 1762 aa22.43■■□□□ 1.18
RPUSD4-207ENST00000532800 RNF123Q5XPI4 1314 aa22.42■■□□□ 1.18
RPUSD4-207ENST00000532800 NEUROD2Q15784 382 aa22.42■■□□□ 1.18
RPUSD4-207ENST00000532800 BABAM1Q9NWV8 329 aa22.42■■□□□ 1.18
RPUSD4-207ENST00000532800 LAMB2P55268 1798 aa22.41■■□□□ 1.18
RPUSD4-207ENST00000532800 TCERG1O14776 1098 aaKnown RBP22.41■■□□□ 1.18
RPUSD4-207ENST00000532800 KRT24Q2M2I5 525 aa22.41■■□□□ 1.18
RPUSD4-207ENST00000532800 PARP10Q53GL7 1025 aa22.41■■□□□ 1.18
RPUSD4-207ENST00000532800 EAPPQ56P03 285 aaPredicted RBP22.41■■□□□ 1.18
RPUSD4-207ENST00000532800 PPP1R42Q7Z4L9 355 aa22.41■■□□□ 1.18
RPUSD4-207ENST00000532800 CREBZFQ9NS37 354 aa22.41■■□□□ 1.18
RPUSD4-207ENST00000532800 PASKQ96RG2 1323 aa22.4■■□□□ 1.18
RPUSD4-207ENST00000532800 PPEF1O14829 653 aaPredicted RBP22.4■■□□□ 1.18
RPUSD4-207ENST00000532800 HSPA1AP0DMV8 641 aaKnown RBP22.4■■□□□ 1.18
RPUSD4-207ENST00000532800 HSPA1BP0DMV9 641 aaKnown RBP22.4■■□□□ 1.18
RPUSD4-207ENST00000532800 CC2D2BQ6DHV5 1058 aa22.4■■□□□ 1.18
RPUSD4-207ENST00000532800 RBM17Q96I25 401 aaKnown RBP22.4■■□□□ 1.18
RPUSD4-207ENST00000532800 CRAMP1Q96RY5 1269 aa22.4■■□□□ 1.18
RPUSD4-207ENST00000532800 HACL1Q9UJ83 578 aa22.4■■□□□ 1.18
RPUSD4-207ENST00000532800 EPHX2P34913 555 aa22.39■■□□□ 1.17
RPUSD4-207ENST00000532800 MKRN1Q9UHC7 482 aaKnown RBP22.39■■□□□ 1.17
RPUSD4-207ENST00000532800 LTBP1Q14766 1721 aa22.38■■□□□ 1.17
RPUSD4-207ENST00000532800 AIMP1Q12904 312 aaKnown RBP22.38■■□□□ 1.17
RPUSD4-207ENST00000532800 COPS6Q7L5N1 327 aa22.38■■□□□ 1.17
RPUSD4-207ENST00000532800 XAGE3Q8WTP9 111 aa22.38■■□□□ 1.17
RPUSD4-207ENST00000532800 JDP2Q8WYK2 163 aa22.38■■□□□ 1.17
RPUSD4-207ENST00000532800 UTP14AQ9BVJ6 771 aaKnown RBP22.38■■□□□ 1.17
RPUSD4-207ENST00000532800 TRIM35Q9UPQ4 493 aa22.38■■□□□ 1.17
RPUSD4-207ENST00000532800 GPC2Q8N158 579 aa22.37■■□□□ 1.17
RPUSD4-207ENST00000532800 NLRP3Q96P20 1036 aa22.37■■□□□ 1.17
RPUSD4-207ENST00000532800 LAS1LQ9Y4W2 734 aaKnown RBP22.37■■□□□ 1.17
RPUSD4-207ENST00000532800 CHL1O00533 1208 aa22.36■■□□□ 1.17
RPUSD4-207ENST00000532800 RUNDC1Q96C34 613 aa22.36■■□□□ 1.17
RPUSD4-207ENST00000532800 CLEC11AQ9Y240 323 aa22.36■■□□□ 1.17
RPUSD4-207ENST00000532800 GJA3Q9Y6H8 435 aa22.36■■□□□ 1.17
RPUSD4-207ENST00000532800 ABCC4O15439 1325 aa22.35■■□□□ 1.17
RPUSD4-207ENST00000532800 ITGBL1O95965 494 aaPredicted RBP22.35■■□□□ 1.17
RPUSD4-207ENST00000532800 WDR43Q15061 677 aaKnown RBP eCLIP22.35■■□□□ 1.17
RPUSD4-207ENST00000532800 SLC10A5Q5PT55 438 aa22.35■■□□□ 1.17
RPUSD4-207ENST00000532800 NLRP10Q86W26 655 aa22.35■■□□□ 1.17
RPUSD4-207ENST00000532800 LARGE2Q8N3Y3 721 aa22.35■■□□□ 1.17
RPUSD4-207ENST00000532800 EIF6P56537 245 aaKnown RBP22.34■■□□□ 1.17
RPUSD4-207ENST00000532800 ZNF428Q96B54 188 aa22.34■■□□□ 1.17
RPUSD4-207ENST00000532800 DDX21Q9NR30 783 aaKnown RBP eCLIP22.34■■□□□ 1.17
RPUSD4-207ENST00000532800 CHPF2Q9P2E5 772 aa22.34■■□□□ 1.17
RPUSD4-207ENST00000532800 ADAMTS8Q9UP79 889 aa22.34■■□□□ 1.17
RPUSD4-207ENST00000532800 CNTNAP1P78357 1384 aa22.34■■□□□ 1.17
RPUSD4-207ENST00000532800 HCLS1P14317 486 aaPredicted RBP22.33■■□□□ 1.17
RPUSD4-207ENST00000532800 GRIPAP1Q4V328 841 aa22.33■■□□□ 1.17
RPUSD4-207ENST00000532800 HSP90AB3PQ58FF7 597 aa22.33■■□□□ 1.17
RPUSD4-207ENST00000532800 MAP1SQ66K74 1059 aaPredicted RBP22.33■■□□□ 1.17
RPUSD4-207ENST00000532800 TAF1P21675 1872 aa22.32■■□□□ 1.16
RPUSD4-207ENST00000532800 TCIRG1Q13488 830 aa22.32■■□□□ 1.16
RPUSD4-207ENST00000532800 PNMA8AQ86V59 439 aaPredicted RBP22.32■■□□□ 1.16
RPUSD4-207ENST00000532800 ATP6V0A2Q9Y487 856 aa22.32■■□□□ 1.16
RPUSD4-207ENST00000532800 TMEM88BA6NKF7 163 aa22.31■■□□□ 1.16
RPUSD4-207ENST00000532800 PPIP5K2O43314 1243 aa22.31■■□□□ 1.16
RPUSD4-207ENST00000532800 SCNN1DP51172 638 aa22.31■■□□□ 1.16
RPUSD4-207ENST00000532800 AOC3Q16853 763 aa22.31■■□□□ 1.16
RPUSD4-207ENST00000532800 DDX60Q8IY21 1712 aaKnown RBP22.31■■□□□ 1.16
RPUSD4-207ENST00000532800 HDGFL1Q5TGJ6 251 aa22.3■■□□□ 1.16
RPUSD4-207ENST00000532800 NIM1KQ8IY84 436 aa22.3■■□□□ 1.16
RPUSD4-207ENST00000532800 CNTROBQ8N137 903 aa22.3■■□□□ 1.16
RPUSD4-207ENST00000532800 TRMT112Q9UI30 125 aaKnown RBP22.3■■□□□ 1.16
RPUSD4-207ENST00000532800 EPS15P42566 896 aa22.29■■□□□ 1.16
RPUSD4-207ENST00000532800 TNS4Q8IZW8 715 aa22.29■■□□□ 1.16
RPUSD4-207ENST00000532800 SH3TC1Q8TE82 1336 aa22.29■■□□□ 1.16
RPUSD4-207ENST00000532800 LMOD1P29536 600 aaPredicted RBP22.28■■□□□ 1.16
RPUSD4-207ENST00000532800 TMX4Q9H1E5 349 aaPredicted RBP22.27■■□□□ 1.16
RPUSD4-207ENST00000532800 HOXB7P09629 217 aa22.26■■□□□ 1.15
RPUSD4-207ENST00000532800 VEGFBP49765 207 aa22.26■■□□□ 1.15
RPUSD4-207ENST00000532800 PLBD2Q8NHP8 589 aa22.26■■□□□ 1.15
RPUSD4-207ENST00000532800 RTFDC1Q9BY42 306 aaPredicted RBP22.26■■□□□ 1.15
RPUSD4-207ENST00000532800 PRKRIP1Q9H875 184 aaPredicted RBP22.26■■□□□ 1.15
RPUSD4-207ENST00000532800 LRRC37AA6NMS7 1700 aa22.26■■□□□ 1.15
RPUSD4-207ENST00000532800 DUOX1Q9NRD9 1551 aa22.25■■□□□ 1.15
RPUSD4-207ENST00000532800 CAPN15O75808 1086 aa22.25■■□□□ 1.15
RPUSD4-207ENST00000532800 BBOX1O75936 387 aa22.25■■□□□ 1.15
RPUSD4-207ENST00000532800 GRAPQ13588 217 aa22.25■■□□□ 1.15
RPUSD4-207ENST00000532800 DUSP27Q5VZP5 1158 aa22.25■■□□□ 1.15
RPUSD4-207ENST00000532800 DPP8Q6V1X1 898 aaPredicted RBP22.25■■□□□ 1.15
RPUSD4-207ENST00000532800 DDX46Q7L014 1031 aaKnown RBP22.25■■□□□ 1.15
RPUSD4-207ENST00000532800 SP8Q8IXZ3 490 aa22.25■■□□□ 1.15
RPUSD4-207ENST00000532800 GRAPLQ8TC17 118 aaPredicted RBP22.25■■□□□ 1.15
RPUSD4-207ENST00000532800 CFAP44Q96MT7 982 aa22.25■■□□□ 1.15
RPUSD4-207ENST00000532800 MBIPQ9NS73 344 aa22.25■■□□□ 1.15
RPUSD4-207ENST00000532800 COL4A1P02462 1669 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms