RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 HOXB7P09629 217 aa24.7■■□□□ 1.54
SSH3-209ENST00000532600 CCDC93Q567U6 631 aa24.7■■□□□ 1.54
SSH3-209ENST00000532600 HOXA10P31260 410 aaPredicted RBP24.69■■□□□ 1.54
SSH3-209ENST00000532600 PARP10Q53GL7 1025 aa24.69■■□□□ 1.54
SSH3-209ENST00000532600 HDGFL1Q5TGJ6 251 aa24.69■■□□□ 1.54
SSH3-209ENST00000532600 ALDH1B1P30837 517 aa24.68■■□□□ 1.54
SSH3-209ENST00000532600 DUSP27Q5VZP5 1158 aa24.68■■□□□ 1.54
SSH3-209ENST00000532600 FKBP4Q02790 459 aaKnown RBP eCLIP24.67■■□□□ 1.54
SSH3-209ENST00000532600 PPP1R42Q7Z4L9 355 aa24.67■■□□□ 1.54
SSH3-209ENST00000532600 NLRP10Q86W26 655 aa24.67■■□□□ 1.54
SSH3-209ENST00000532600 SYNE4Q8N205 404 aa24.67■■□□□ 1.54
SSH3-209ENST00000532600 IFT57Q9NWB7 429 aa24.67■■□□□ 1.54
SSH3-209ENST00000532600 LAMB2P55268 1798 aa24.67■■□□□ 1.54
SSH3-209ENST00000532600 ANP32CO43423 234 aa24.66■■□□□ 1.54
SSH3-209ENST00000532600 TCIRG1Q13488 830 aa24.66■■□□□ 1.54
SSH3-209ENST00000532600 SLC10A5Q5PT55 438 aa24.66■■□□□ 1.54
SSH3-209ENST00000532600 UTP14AQ9BVJ6 771 aaKnown RBP24.66■■□□□ 1.54
SSH3-209ENST00000532600 ZNF277Q9NRM2 450 aaPredicted RBP24.66■■□□□ 1.54
SSH3-209ENST00000532600 C16orf71Q8IYS4 520 aaPredicted RBP24.65■■□□□ 1.54
SSH3-209ENST00000532600 VEGFAP15692 232 aaPredicted RBP24.64■■□□□ 1.54
SSH3-209ENST00000532600 COL4A5P29400 1685 aa24.63■■□□□ 1.53
SSH3-209ENST00000532600 FSTL1Q12841 308 aa24.63■■□□□ 1.53
SSH3-209ENST00000532600 RTKN2Q8IZC4 609 aa24.63■■□□□ 1.53
SSH3-209ENST00000532600 RPGRQ92834 1020 aaKnown RBP24.63■■□□□ 1.53
SSH3-209ENST00000532600 CRAMP1Q96RY5 1269 aa24.63■■□□□ 1.53
SSH3-209ENST00000532600 DBF4Q9UBU7 674 aaPredicted RBP24.63■■□□□ 1.53
SSH3-209ENST00000532600 DDNO94850 711 aaPredicted RBP24.62■■□□□ 1.53
SSH3-209ENST00000532600 GNAI1P63096 354 aa24.62■■□□□ 1.53
SSH3-209ENST00000532600 HSP90AB3PQ58FF7 597 aa24.62■■□□□ 1.53
SSH3-209ENST00000532600 C8orf58Q8NAV2 365 aa24.62■■□□□ 1.53
SSH3-209ENST00000532600 PLBD2Q8NHP8 589 aa24.62■■□□□ 1.53
SSH3-209ENST00000532600 ZNF428Q96B54 188 aa24.62■■□□□ 1.53
SSH3-209ENST00000532600 APLP1P51693 650 aa24.61■■□□□ 1.53
SSH3-209ENST00000532600 DPY19L2Q6NUT2 758 aa24.61■■□□□ 1.53
SSH3-209ENST00000532600 RNF123Q5XPI4 1314 aa24.61■■□□□ 1.53
SSH3-209ENST00000532600 ELL2O00472 640 aaPredicted RBP24.6■■□□□ 1.53
SSH3-209ENST00000532600 HCLS1P14317 486 aaPredicted RBP24.6■■□□□ 1.53
SSH3-209ENST00000532600 ANKRD13DQ6ZTN6 518 aa24.6■■□□□ 1.53
SSH3-209ENST00000532600 RBM17Q96I25 401 aaKnown RBP24.6■■□□□ 1.53
SSH3-209ENST00000532600 NLRP3Q96P20 1036 aa24.6■■□□□ 1.53
SSH3-209ENST00000532600 ISCA1Q9BUE6 129 aa24.6■■□□□ 1.53
SSH3-209ENST00000532600 DDX60Q8IY21 1712 aaKnown RBP24.6■■□□□ 1.53
SSH3-209ENST00000532600 ZNF541Q9H0D2 1346 aa24.6■■□□□ 1.53
SSH3-209ENST00000532600 HTRA3P83110 453 aa24.59■■□□□ 1.53
SSH3-209ENST00000532600 CALD1Q05682 793 aaKnown RBP24.59■■□□□ 1.53
SSH3-209ENST00000532600 DNAJC5GQ8N7S2 189 aa24.59■■□□□ 1.53
SSH3-209ENST00000532600 PSMD1Q99460 953 aa24.59■■□□□ 1.53
SSH3-209ENST00000532600 HYPKQ9NX55 129 aa24.59■■□□□ 1.53
SSH3-209ENST00000532600 PPEF1O14829 653 aaPredicted RBP24.58■■□□□ 1.53
SSH3-209ENST00000532600 IARSP41252 1262 aaKnown RBP24.58■■□□□ 1.53
SSH3-209ENST00000532600 SMC1BQ8NDV3 1235 aa24.58■■□□□ 1.53
SSH3-209ENST00000532600 PHAXQ9H814 394 aaKnown RBP24.58■■□□□ 1.53
SSH3-209ENST00000532600 TRMT112Q9UI30 125 aaKnown RBP24.58■■□□□ 1.53
SSH3-209ENST00000532600 ABCC4O15439 1325 aa24.58■■□□□ 1.52
SSH3-209ENST00000532600 TCERG1O14776 1098 aaKnown RBP24.57■■□□□ 1.52
SSH3-209ENST00000532600 TSPYL6Q8N831 410 aa24.57■■□□□ 1.52
SSH3-209ENST00000532600 TAF1P21675 1872 aa24.57■■□□□ 1.52
SSH3-209ENST00000532600 ATP5J2-PTCD1G3V325 749 aa24.56■■□□□ 1.52
SSH3-209ENST00000532600 CCDC27Q2M243 656 aa24.56■■□□□ 1.52
SSH3-209ENST00000532600 DIEXFQ68CQ4 756 aaKnown RBP24.56■■□□□ 1.52
SSH3-209ENST00000532600 CC2D2BQ6DHV5 1058 aa24.56■■□□□ 1.52
SSH3-209ENST00000532600 MRS2Q9HD23 443 aa24.56■■□□□ 1.52
SSH3-209ENST00000532600 SH3TC1Q8TE82 1336 aa24.56■■□□□ 1.52
SSH3-209ENST00000532600 FZD9O00144 591 aa24.55■■□□□ 1.52
SSH3-209ENST00000532600 POTEIP0CG38 1075 aa24.55■■□□□ 1.52
SSH3-209ENST00000532600 POTEJP0CG39 1038 aa24.55■■□□□ 1.52
SSH3-209ENST00000532600 WWC1Q8IX03 1113 aa24.55■■□□□ 1.52
SSH3-209ENST00000532600 TSR2Q969E8 191 aaKnown RBP24.55■■□□□ 1.52
SSH3-209ENST00000532600 L3MBTL3Q96JM7 780 aaPredicted RBP24.55■■□□□ 1.52
SSH3-209ENST00000532600 COL4A1P02462 1669 aa24.55■■□□□ 1.52
SSH3-209ENST00000532600 ATP6V0A2Q9Y487 856 aa24.53■■□□□ 1.52
SSH3-209ENST00000532600 SCN4AP35499 1836 aa24.52■■□□□ 1.52
SSH3-209ENST00000532600 FAM89AQ96GI7 184 aa24.52■■□□□ 1.52
SSH3-209ENST00000532600 TRIM28Q13263 835 aaKnown RBP24.51■■□□□ 1.51
SSH3-209ENST00000532600 GRIPAP1Q4V328 841 aa24.49■■□□□ 1.51
SSH3-209ENST00000532600 TAF1DQ9H5J8 278 aaPredicted RBP24.49■■□□□ 1.51
SSH3-209ENST00000532600 LRRC37AA6NMS7 1700 aa24.48■■□□□ 1.51
SSH3-209ENST00000532600 GRAPQ13588 217 aa24.48■■□□□ 1.51
SSH3-209ENST00000532600 LTBP1Q14766 1721 aa24.48■■□□□ 1.51
SSH3-209ENST00000532600 NCBP3Q53F19 620 aaKnown RBP24.48■■□□□ 1.51
SSH3-209ENST00000532600 RIC3Q7Z5B4 369 aa24.48■■□□□ 1.51
SSH3-209ENST00000532600 SP8Q8IXZ3 490 aa24.48■■□□□ 1.51
SSH3-209ENST00000532600 ADAMTSL1Q8N6G6 1762 aa24.48■■□□□ 1.51
SSH3-209ENST00000532600 GRAPLQ8TC17 118 aaPredicted RBP24.48■■□□□ 1.51
SSH3-209ENST00000532600 DUOX1Q9NRD9 1551 aa24.48■■□□□ 1.51
SSH3-209ENST00000532600 BBOX1O75936 387 aa24.47■■□□□ 1.51
SSH3-209ENST00000532600 GOLGA2Q08379 1002 aa24.47■■□□□ 1.51
SSH3-209ENST00000532600 RTL5Q5HYW3 569 aaPredicted RBP24.47■■□□□ 1.51
SSH3-209ENST00000532600 DDX46Q7L014 1031 aaKnown RBP24.47■■□□□ 1.51
SSH3-209ENST00000532600 RTFDC1Q9BY42 306 aaPredicted RBP24.47■■□□□ 1.51
SSH3-209ENST00000532600 IL16Q14005 1332 aa24.46■■□□□ 1.51
SSH3-209ENST00000532600 SF3B3Q15393 1217 aaKnown RBP24.46■■□□□ 1.51
SSH3-209ENST00000532600 CCDC30Q5VVM6 783 aa24.46■■□□□ 1.51
SSH3-209ENST00000532600 LARGE2Q8N3Y3 721 aa24.46■■□□□ 1.51
SSH3-209ENST00000532600 JDP2Q8WYK2 163 aa24.46■■□□□ 1.51
SSH3-209ENST00000532600 IQCA1LA6NCM1 817 aa24.45■■□□□ 1.5
SSH3-209ENST00000532600 CHADLQ6NUI6 762 aa24.45■■□□□ 1.5
SSH3-209ENST00000532600 GPC2Q8N158 579 aa24.45■■□□□ 1.5
SSH3-209ENST00000532600 MYD88Q99836 296 aa24.45■■□□□ 1.5
SSH3-209ENST00000532600 IRS4O14654 1257 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms