RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 GPRC5DQ9NZD1 345 aa17.65■□□□□ 0.42
CLNS1A-211ENST00000532069 IL13P35225 146 aa17.64■□□□□ 0.41
CLNS1A-211ENST00000532069 HUNKP57058 714 aa17.64■□□□□ 0.41
CLNS1A-211ENST00000532069 PKN2Q16513 984 aaKnown RBP17.64■□□□□ 0.41
CLNS1A-211ENST00000532069 MORC1Q86VD1 984 aa17.64■□□□□ 0.41
CLNS1A-211ENST00000532069 VPS33BQ9H267 617 aa17.64■□□□□ 0.41
CLNS1A-211ENST00000532069 A1BGP04217 495 aa17.63■□□□□ 0.41
CLNS1A-211ENST00000532069 CCDC102AQ96A19 550 aa17.63■□□□□ 0.41
CLNS1A-211ENST00000532069 GLIS2Q9BZE0 524 aaPredicted RBP17.63■□□□□ 0.41
CLNS1A-211ENST00000532069 NIP7Q9Y221 180 aaKnown RBP eCLIP17.63■□□□□ 0.41
CLNS1A-211ENST00000532069 SNED1Q8TER0 1413 aa17.63■□□□□ 0.41
CLNS1A-211ENST00000532069 PGAP2Q9UHJ9 254 aa17.62■□□□□ 0.41
CLNS1A-211ENST00000532069 REM2Q8IYK8 340 aaPredicted RBP17.61■□□□□ 0.41
CLNS1A-211ENST00000532069 RPGRQ92834 1020 aaKnown RBP17.61■□□□□ 0.41
CLNS1A-211ENST00000532069 POLR3GLQ9BT43 218 aa17.61■□□□□ 0.41
CLNS1A-211ENST00000532069 NYXQ9GZU5 481 aa17.61■□□□□ 0.41
CLNS1A-211ENST00000532069 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
CLNS1A-211ENST00000532069 RGMBQ6NW40 437 aa17.6■□□□□ 0.41
CLNS1A-211ENST00000532069 SIPA1L3O60292 1781 aaPredicted RBP17.6■□□□□ 0.41
CLNS1A-211ENST00000532069 COL4A5P29400 1685 aa17.59■□□□□ 0.41
CLNS1A-211ENST00000532069 PPIP5K2O43314 1243 aa17.59■□□□□ 0.41
CLNS1A-211ENST00000532069 TRPA1O75762 1119 aa17.59■□□□□ 0.41
CLNS1A-211ENST00000532069 HABP4Q5JVS0 413 aaKnown RBP17.59■□□□□ 0.41
CLNS1A-211ENST00000532069 NPC1L1Q9UHC9 1359 aa17.58■□□□□ 0.4
CLNS1A-211ENST00000532069 CRY2Q49AN0 593 aa17.58■□□□□ 0.4
CLNS1A-211ENST00000532069 C2orf69Q8N8R5 385 aa17.58■□□□□ 0.4
CLNS1A-211ENST00000532069 SUPT20HQ8NEM7 779 aa17.58■□□□□ 0.4
CLNS1A-211ENST00000532069 BCL2L13Q9BXK5 485 aa17.58■□□□□ 0.4
CLNS1A-211ENST00000532069 RNF186Q9NXI6 227 aa17.58■□□□□ 0.4
CLNS1A-211ENST00000532069 HPS5Q9UPZ3 1129 aa17.58■□□□□ 0.4
CLNS1A-211ENST00000532069 FAM177BA6PVY3 158 aa17.57■□□□□ 0.4
CLNS1A-211ENST00000532069 HMOX1P09601 288 aa17.57■□□□□ 0.4
CLNS1A-211ENST00000532069 ZNRF3Q9ULT6 936 aa17.57■□□□□ 0.4
CLNS1A-211ENST00000532069 KIF7Q2M1P5 1343 aa17.56■□□□□ 0.4
CLNS1A-211ENST00000532069 GNAT3A8MTJ3 354 aa17.56■□□□□ 0.4
CLNS1A-211ENST00000532069 KIF23Q02241 960 aaPredicted RBP17.56■□□□□ 0.4
CLNS1A-211ENST00000532069 TNIP1Q15025 636 aa17.56■□□□□ 0.4
CLNS1A-211ENST00000532069 RBM17Q96I25 401 aaKnown RBP17.56■□□□□ 0.4
CLNS1A-211ENST00000532069 ZIC5Q96T25 663 aa17.56■□□□□ 0.4
CLNS1A-211ENST00000532069 HDAC9Q9UKV0 1011 aa17.56■□□□□ 0.4
CLNS1A-211ENST00000532069 H7C1D1 291 aa17.55■□□□□ 0.4
CLNS1A-211ENST00000532069 PPEF1O14829 653 aaPredicted RBP17.55■□□□□ 0.4
CLNS1A-211ENST00000532069 GMPSP49915 693 aaPredicted RBP17.55■□□□□ 0.4
CLNS1A-211ENST00000532069 ZNF157P51786 506 aaPredicted RBP17.55■□□□□ 0.4
CLNS1A-211ENST00000532069 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
CLNS1A-211ENST00000532069 GBA2Q9HCG7 927 aaPredicted RBP17.55■□□□□ 0.4
CLNS1A-211ENST00000532069 RIC1Q4ADV7 1423 aa17.55■□□□□ 0.4
CLNS1A-211ENST00000532069 HOXA10P31260 410 aaPredicted RBP17.54■□□□□ 0.4
CLNS1A-211ENST00000532069 CXCL9Q07325 125 aa17.54■□□□□ 0.4
CLNS1A-211ENST00000532069 CRAMP1Q96RY5 1269 aa17.54■□□□□ 0.4
CLNS1A-211ENST00000532069 FAM155AB1AL88 458 aaPredicted RBP17.53■□□□□ 0.4
CLNS1A-211ENST00000532069 AOC3Q16853 763 aa17.53■□□□□ 0.4
CLNS1A-211ENST00000532069 BTBD11A6QL63 1104 aa17.52■□□□□ 0.4
CLNS1A-211ENST00000532069 USP48Q86UV5 1035 aa17.52■□□□□ 0.4
CLNS1A-211ENST00000532069 PANK3Q9H999 370 aa17.52■□□□□ 0.4
CLNS1A-211ENST00000532069 SNRPA1P09661 255 aaKnown RBP17.51■□□□□ 0.39
CLNS1A-211ENST00000532069 USP16Q9Y5T5 823 aa17.51■□□□□ 0.39
CLNS1A-211ENST00000532069 IBTKQ9P2D0 1353 aaPredicted RBP17.51■□□□□ 0.39
CLNS1A-211ENST00000532069 SLC10A3P09131 477 aa17.5■□□□□ 0.39
CLNS1A-211ENST00000532069 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
CLNS1A-211ENST00000532069 IL17REQ8NFR9 667 aa17.5■□□□□ 0.39
CLNS1A-211ENST00000532069 CNOT7Q9UIV1 285 aaKnown RBP17.5■□□□□ 0.39
CLNS1A-211ENST00000532069 KNSTRNQ9Y448 316 aa17.5■□□□□ 0.39
CLNS1A-211ENST00000532069 DIAPH1O60610 1272 aaKnown RBP17.49■□□□□ 0.39
CLNS1A-211ENST00000532069 TRPM4Q8TD43 1214 aa17.49■□□□□ 0.39
CLNS1A-211ENST00000532069 DCPSQ96C86 337 aaKnown RBP17.49■□□□□ 0.39
CLNS1A-211ENST00000532069 CSRNP1Q96S65 589 aa17.49■□□□□ 0.39
CLNS1A-211ENST00000532069 PIP4K2AP48426 406 aaPredicted RBP17.48■□□□□ 0.39
CLNS1A-211ENST00000532069 HIRAP54198 1017 aaPredicted RBP17.48■□□□□ 0.39
CLNS1A-211ENST00000532069 FBXO46Q6PJ61 603 aaPredicted RBP17.48■□□□□ 0.39
CLNS1A-211ENST00000532069 ATP6V0A2Q9Y487 856 aa17.48■□□□□ 0.39
CLNS1A-211ENST00000532069 ABCC12Q96J65 1359 aa17.48■□□□□ 0.39
CLNS1A-211ENST00000532069 TCERG1O14776 1098 aaKnown RBP17.47■□□□□ 0.39
CLNS1A-211ENST00000532069 NUTM1Q86Y26 1132 aa17.47■□□□□ 0.39
CLNS1A-211ENST00000532069 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
CLNS1A-211ENST00000532069 NUP98P52948 1817 aa17.47■□□□□ 0.39
CLNS1A-211ENST00000532069 CEMIPQ8WUJ3 1361 aa17.46■□□□□ 0.39
CLNS1A-211ENST00000532069 KIAA2012Q0VF49 1180 aa17.46■□□□□ 0.39
CLNS1A-211ENST00000532069 DPP8Q6V1X1 898 aaPredicted RBP17.46■□□□□ 0.39
CLNS1A-211ENST00000532069 MICALL2Q8IY33 904 aa17.46■□□□□ 0.39
CLNS1A-211ENST00000532069 DPF2Q92785 391 aa17.46■□□□□ 0.39
CLNS1A-211ENST00000532069 ERVV-1B6SEH8 477 aa17.45■□□□□ 0.38
CLNS1A-211ENST00000532069 RAD17O75943 681 aa17.45■□□□□ 0.38
CLNS1A-211ENST00000532069 NOM1Q5C9Z4 860 aaKnown RBP17.45■□□□□ 0.38
CLNS1A-211ENST00000532069 POLR2AP24928 1970 aaKnown RBP17.44■□□□□ 0.38
CLNS1A-211ENST00000532069 FXR1P51114 621 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLNS1A-211ENST00000532069 HLFQ16534 295 aa17.44■□□□□ 0.38
CLNS1A-211ENST00000532069 INTS3Q68E01 1043 aaKnown RBP17.44■□□□□ 0.38
CLNS1A-211ENST00000532069 KIF6Q6ZMV9 814 aa17.44■□□□□ 0.38
CLNS1A-211ENST00000532069 SULF1Q8IWU6 871 aa17.44■□□□□ 0.38
CLNS1A-211ENST00000532069 NLRP3Q96P20 1036 aa17.44■□□□□ 0.38
CLNS1A-211ENST00000532069 MPNDQ8N594 471 aa17.43■□□□□ 0.38
CLNS1A-211ENST00000532069 ZNF296Q8WUU4 475 aaPredicted RBP17.43■□□□□ 0.38
CLNS1A-211ENST00000532069 LAMB4A4D0S4 1761 aa17.43■□□□□ 0.38
CLNS1A-211ENST00000532069 KCNQ3O43525 872 aa17.42■□□□□ 0.38
CLNS1A-211ENST00000532069 RPS12P25398 132 aaKnown RBP17.42■□□□□ 0.38
CLNS1A-211ENST00000532069 FKBP1BP68106 108 aa17.42■□□□□ 0.38
CLNS1A-211ENST00000532069 PPP1R42Q7Z4L9 355 aa17.42■□□□□ 0.38
CLNS1A-211ENST00000532069 NBPF26B4DH59 902 aa17.41■□□□□ 0.38
CLNS1A-211ENST00000532069 BBOX1O75936 387 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms