RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 ATP8B2P98198 1209 aa21.42■■□□□ 1.02
RPL38-205ENST00000530646 MCM10Q7L590 875 aa21.41■■□□□ 1.02
RPL38-205ENST00000530646 TTC21AQ8NDW8 1320 aa21.41■■□□□ 1.02
RPL38-205ENST00000530646 CHRM1P11229 460 aaPredicted RBP21.41■■□□□ 1.02
RPL38-205ENST00000530646 H2AFXP16104 143 aaPredicted RBP21.41■■□□□ 1.02
RPL38-205ENST00000530646 CLSTN2Q9H4D0 955 aa21.41■■□□□ 1.02
RPL38-205ENST00000530646 FHOD1Q9Y613 1164 aa21.41■■□□□ 1.02
RPL38-205ENST00000530646 NPHP1O15259 732 aa21.4■■□□□ 1.02
RPL38-205ENST00000530646 BMS1Q14692 1282 aaKnown RBP21.4■■□□□ 1.02
RPL38-205ENST00000530646 FERMT3Q86UX7 667 aa21.4■■□□□ 1.02
RPL38-205ENST00000530646 ANKLE2Q86XL3 938 aa21.4■■□□□ 1.02
RPL38-205ENST00000530646 GTF3C6Q969F1 213 aa21.4■■□□□ 1.02
RPL38-205ENST00000530646 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
RPL38-205ENST00000530646 SKILP12757 684 aa21.4■■□□□ 1.02
RPL38-205ENST00000530646 NUTM1Q86Y26 1132 aa21.4■■□□□ 1.02
RPL38-205ENST00000530646 TEX2Q8IWB9 1127 aa21.4■■□□□ 1.02
RPL38-205ENST00000530646 IL1RAPL2Q9NP60 686 aa21.4■■□□□ 1.02
RPL38-205ENST00000530646 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.4■■□□□ 1.02
RPL38-205ENST00000530646 RAD51AP2Q09MP3 1159 aa21.39■■□□□ 1.02
RPL38-205ENST00000530646 CDC37L1Q7L3B6 337 aa21.39■■□□□ 1.02
RPL38-205ENST00000530646 TSPYL1Q9H0U9 437 aa21.39■■□□□ 1.02
RPL38-205ENST00000530646 DDX19AQ9NUU7 478 aaKnown RBP21.39■■□□□ 1.02
RPL38-205ENST00000530646 TRMT1Q9NXH9 659 aaKnown RBP21.39■■□□□ 1.02
RPL38-205ENST00000530646 NEMFO60524 1076 aa21.39■■□□□ 1.01
RPL38-205ENST00000530646 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.38■■□□□ 1.01
RPL38-205ENST00000530646 CCZ1BP86790 482 aa21.38■■□□□ 1.01
RPL38-205ENST00000530646 CCZ1P86791 482 aaPredicted RBP21.38■■□□□ 1.01
RPL38-205ENST00000530646 PDRG1Q9NUG6 133 aa21.38■■□□□ 1.01
RPL38-205ENST00000530646 ME3Q16798 604 aa21.38■■□□□ 1.01
RPL38-205ENST00000530646 VPS53Q5VIR6 699 aa21.38■■□□□ 1.01
RPL38-205ENST00000530646 CCAR2Q8N163 923 aaKnown RBP21.38■■□□□ 1.01
RPL38-205ENST00000530646 NECAB1Q8N987 351 aa21.38■■□□□ 1.01
RPL38-205ENST00000530646 ZSCAN31Q96LW9 406 aaPredicted RBP21.38■■□□□ 1.01
RPL38-205ENST00000530646 SH2B1Q9NRF2 756 aaPredicted RBP21.38■■□□□ 1.01
RPL38-205ENST00000530646 SPG7Q9UQ90 795 aa21.38■■□□□ 1.01
RPL38-205ENST00000530646 ADCK5Q3MIX3 580 aa21.37■■□□□ 1.01
RPL38-205ENST00000530646 RNF20Q5VTR2 975 aa21.37■■□□□ 1.01
RPL38-205ENST00000530646 LARP1BQ659C4 914 aaKnown RBP21.37■■□□□ 1.01
RPL38-205ENST00000530646 PI4K2BQ8TCG2 481 aa21.37■■□□□ 1.01
RPL38-205ENST00000530646 RGPD8O14715 1765 aaPredicted RBP21.37■■□□□ 1.01
RPL38-205ENST00000530646 ERCC6LQ2NKX8 1250 aa21.37■■□□□ 1.01
RPL38-205ENST00000530646 SARM1Q6SZW1 724 aa21.37■■□□□ 1.01
RPL38-205ENST00000530646 NFATC2IPQ8NCF5 419 aa21.37■■□□□ 1.01
RPL38-205ENST00000530646 NR1I2O75469 434 aa21.36■■□□□ 1.01
RPL38-205ENST00000530646 MRFAP1L1Q96HT8 127 aa21.36■■□□□ 1.01
RPL38-205ENST00000530646 TTC21BQ7Z4L5 1316 aa21.36■■□□□ 1.01
RPL38-205ENST00000530646 PLA2G4AP47712 749 aa21.36■■□□□ 1.01
RPL38-205ENST00000530646 IQCB1Q15051 598 aa21.36■■□□□ 1.01
RPL38-205ENST00000530646 COG3Q96JB2 828 aa21.36■■□□□ 1.01
RPL38-205ENST00000530646 TFIP11Q9UBB9 837 aaKnown RBP21.36■■□□□ 1.01
RPL38-205ENST00000530646 AATKQ6ZMQ8 1374 aa21.36■■□□□ 1.01
RPL38-205ENST00000530646 GOLGA6L4A6NEF3 574 aa21.35■■□□□ 1.01
RPL38-205ENST00000530646 CCDC69A6NI79 296 aa21.35■■□□□ 1.01
RPL38-205ENST00000530646 CLCN6P51797 869 aa21.35■■□□□ 1.01
RPL38-205ENST00000530646 LRRN4CLQ8ND94 238 aa21.35■■□□□ 1.01
RPL38-205ENST00000530646 JAKMIP1Q96N16 626 aaKnown RBP21.35■■□□□ 1.01
RPL38-205ENST00000530646 MIS18AQ9NYP9 233 aa21.35■■□□□ 1.01
RPL38-205ENST00000530646 NPHP3Q7Z494 1330 aa21.35■■□□□ 1.01
RPL38-205ENST00000530646 GNAI3P08754 354 aa21.35■■□□□ 1.01
RPL38-205ENST00000530646 CWC27Q6UX04 472 aaKnown RBP21.35■■□□□ 1.01
RPL38-205ENST00000530646 SPATA32Q96LK8 384 aa21.35■■□□□ 1.01
RPL38-205ENST00000530646 PNMA6AP0CW24 399 aaPredicted RBP21.34■■□□□ 1.01
RPL38-205ENST00000530646 KCND1Q9NSA2 647 aa21.34■■□□□ 1.01
RPL38-205ENST00000530646 USP16Q9Y5T5 823 aa21.34■■□□□ 1.01
RPL38-205ENST00000530646 LEO1Q8WVC0 666 aaPredicted RBP21.34■■□□□ 1.01
RPL38-205ENST00000530646 SCAND2PQ9GZW5 306 aaPredicted RBP21.34■■□□□ 1.01
RPL38-205ENST00000530646 L2HGDHQ9H9P8 463 aa21.34■■□□□ 1.01
RPL38-205ENST00000530646 ZSWIM6Q9HCJ5 1215 aa21.34■■□□□ 1.01
RPL38-205ENST00000530646 LRRFIP2Q9Y608 721 aaKnown RBP21.34■■□□□ 1.01
RPL38-205ENST00000530646 MON2Q7Z3U7 1717 aa21.33■■□□□ 1.01
RPL38-205ENST00000530646 SECISBP2LQ93073 1101 aaKnown RBP21.33■■□□□ 1
RPL38-205ENST00000530646 ITSN1Q15811 1721 aa21.33■■□□□ 1
RPL38-205ENST00000530646 SETD1BQ9UPS6 1966 aaKnown RBP21.32■■□□□ 1
RPL38-205ENST00000530646 CRB1P82279 1406 aa21.32■■□□□ 1
RPL38-205ENST00000530646 PLEKHG3A1L390 1219 aa21.32■■□□□ 1
RPL38-205ENST00000530646 C11orf57Q6ZUT1 292 aaPredicted RBP21.32■■□□□ 1
RPL38-205ENST00000530646 PGBD1Q96JS3 809 aa21.32■■□□□ 1
RPL38-205ENST00000530646 TPCN1Q9ULQ1 816 aa21.32■■□□□ 1
RPL38-205ENST00000530646 CYP46A1Q9Y6A2 500 aa21.32■■□□□ 1
RPL38-205ENST00000530646 AKAP12Q02952 1782 aa21.32■■□□□ 1
RPL38-205ENST00000530646 DIP2AQ14689 1571 aa21.32■■□□□ 1
RPL38-205ENST00000530646 GOLGA6L19H0YKK7 550 aa21.32■■□□□ 1
RPL38-205ENST00000530646 PTH1RQ03431 593 aa21.32■■□□□ 1
RPL38-205ENST00000530646 NUTM2GQ5VZR2 741 aa21.32■■□□□ 1
RPL38-205ENST00000530646 FILIP1Q7Z7B0 1213 aa21.32■■□□□ 1
RPL38-205ENST00000530646 NGDNQ8NEJ9 315 aaKnown RBP21.32■■□□□ 1
RPL38-205ENST00000530646 DDX54Q8TDD1 881 aaKnown RBP21.32■■□□□ 1
RPL38-205ENST00000530646 XRN1Q8IZH2 1706 aaKnown RBP21.32■■□□□ 1
RPL38-205ENST00000530646 CAVIN2O95810 425 aa21.31■■□□□ 1
RPL38-205ENST00000530646 CCDC93Q567U6 631 aa21.31■■□□□ 1
RPL38-205ENST00000530646 SULT6B1Q6IMI4 303 aa21.31■■□□□ 1
RPL38-205ENST00000530646 SOS1Q07889 1333 aaPredicted RBP21.31■■□□□ 1
RPL38-205ENST00000530646 HTATSF1O43719 755 aaKnown RBP21.31■■□□□ 1
RPL38-205ENST00000530646 PRPF40BQ6NWY9 871 aaKnown RBP21.31■■□□□ 1
RPL38-205ENST00000530646 NEK11Q8NG66 645 aa21.31■■□□□ 1
RPL38-205ENST00000530646 TM6SF1Q9BZW5 370 aa21.31■■□□□ 1
RPL38-205ENST00000530646 KIF2AO00139 706 aaPredicted RBP21.3■■□□□ 1
RPL38-205ENST00000530646 CNTROBQ8N137 903 aa21.3■■□□□ 1
RPL38-205ENST00000530646 CHMP4CQ96CF2 233 aa21.3■■□□□ 1
RPL38-205ENST00000530646 ZRANB2O95218 330 aaKnown RBP eCLIP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms