RNA–Protein interactions for RNA: ENST00000530628.2

CDKN2A-210, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN2A, Length 748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-210ENST00000530628 HOXA10P31260 410 aaPredicted RBP28.91■■■□□ 2.22
CDKN2A-210ENST00000530628 JDP2Q8WYK2 163 aa28.91■■■□□ 2.22
CDKN2A-210ENST00000530628 RBM17Q96I25 401 aaKnown RBP28.91■■■□□ 2.22
CDKN2A-210ENST00000530628 HACL1Q9UJ83 578 aa28.91■■■□□ 2.22
CDKN2A-210ENST00000530628 TMPOP42166 694 aaKnown RBP28.9■■■□□ 2.22
CDKN2A-210ENST00000530628 PARP10Q53GL7 1025 aa28.9■■■□□ 2.22
CDKN2A-210ENST00000530628 EAPPQ56P03 285 aaPredicted RBP28.9■■■□□ 2.22
CDKN2A-210ENST00000530628 NTSR2O95665 410 aa28.89■■■□□ 2.22
CDKN2A-210ENST00000530628 HSPA1AP0DMV8 641 aaKnown RBP28.89■■■□□ 2.22
CDKN2A-210ENST00000530628 HSPA1BP0DMV9 641 aaKnown RBP28.89■■■□□ 2.22
CDKN2A-210ENST00000530628 GRIPAP1Q4V328 841 aa28.89■■■□□ 2.22
CDKN2A-210ENST00000530628 SNED1Q8TER0 1413 aa28.88■■■□□ 2.21
CDKN2A-210ENST00000530628 PDIA6Q15084 440 aa28.88■■■□□ 2.21
CDKN2A-210ENST00000530628 CRAMP1Q96RY5 1269 aa28.88■■■□□ 2.21
CDKN2A-210ENST00000530628 CLEC11AQ9Y240 323 aa28.88■■■□□ 2.21
CDKN2A-210ENST00000530628 EPHX2P34913 555 aa28.87■■■□□ 2.21
CDKN2A-210ENST00000530628 GPC2Q8N158 579 aa28.87■■■□□ 2.21
CDKN2A-210ENST00000530628 NLRP3Q96P20 1036 aa28.87■■■□□ 2.21
CDKN2A-210ENST00000530628 LRP10Q7Z4F1 713 aa28.86■■■□□ 2.21
CDKN2A-210ENST00000530628 PNMA8AQ86V59 439 aaPredicted RBP28.86■■■□□ 2.21
CDKN2A-210ENST00000530628 MKRN1Q9UHC7 482 aaKnown RBP28.86■■■□□ 2.21
CDKN2A-210ENST00000530628 RNF123Q5XPI4 1314 aa28.86■■■□□ 2.21
CDKN2A-210ENST00000530628 PASKQ96RG2 1323 aa28.86■■■□□ 2.21
CDKN2A-210ENST00000530628 ANKRD36CQ5JPF3 1778 aa28.85■■■□□ 2.21
CDKN2A-210ENST00000530628 PPEF1O14829 653 aaPredicted RBP28.85■■■□□ 2.21
CDKN2A-210ENST00000530628 EIF6P56537 245 aaKnown RBP28.85■■■□□ 2.21
CDKN2A-210ENST00000530628 UTP14AQ9BVJ6 771 aaKnown RBP28.85■■■□□ 2.21
CDKN2A-210ENST00000530628 TCERG1O14776 1098 aaKnown RBP28.84■■■□□ 2.21
CDKN2A-210ENST00000530628 ANXA1P04083 346 aa28.84■■■□□ 2.21
CDKN2A-210ENST00000530628 NEUROD2Q15784 382 aa28.84■■■□□ 2.21
CDKN2A-210ENST00000530628 PROSER3Q2NL68 480 aa28.84■■■□□ 2.21
CDKN2A-210ENST00000530628 ADAMTSL1Q8N6G6 1762 aa28.83■■■□□ 2.21
CDKN2A-210ENST00000530628 DDX10Q13206 875 aaKnown RBP28.83■■■□□ 2.21
CDKN2A-210ENST00000530628 NECTIN2Q92692 538 aa28.83■■■□□ 2.21
CDKN2A-210ENST00000530628 TMX4Q9H1E5 349 aaPredicted RBP28.83■■■□□ 2.21
CDKN2A-210ENST00000530628 MYBBP1AQ9BQG0 1328 aaKnown RBP28.83■■■□□ 2.21
CDKN2A-210ENST00000530628 ITGBL1O95965 494 aaPredicted RBP28.82■■■□□ 2.2
CDKN2A-210ENST00000530628 SLC10A5Q5PT55 438 aa28.82■■■□□ 2.2
CDKN2A-210ENST00000530628 C3orf67Q6ZVT6 689 aa28.82■■■□□ 2.2
CDKN2A-210ENST00000530628 COPS6Q7L5N1 327 aa28.82■■■□□ 2.2
CDKN2A-210ENST00000530628 CCDC146Q8IYE0 955 aa28.82■■■□□ 2.2
CDKN2A-210ENST00000530628 LARGE2Q8N3Y3 721 aa28.82■■■□□ 2.2
CDKN2A-210ENST00000530628 GJA3Q9Y6H8 435 aa28.82■■■□□ 2.2
CDKN2A-210ENST00000530628 AIMP1Q12904 312 aaKnown RBP28.81■■■□□ 2.2
CDKN2A-210ENST00000530628 HSP90AB3PQ58FF7 597 aa28.81■■■□□ 2.2
CDKN2A-210ENST00000530628 TNS4Q8IZW8 715 aa28.81■■■□□ 2.2
CDKN2A-210ENST00000530628 TMEM88BA6NKF7 163 aa28.8■■■□□ 2.2
CDKN2A-210ENST00000530628 COL4A5P29400 1685 aa28.8■■■□□ 2.2
CDKN2A-210ENST00000530628 PCNTO95613 3336 aa28.79■■■□□ 2.2
CDKN2A-210ENST00000530628 XAGE3Q8WTP9 111 aa28.79■■■□□ 2.2
CDKN2A-210ENST00000530628 LAS1LQ9Y4W2 734 aaKnown RBP28.79■■■□□ 2.2
CDKN2A-210ENST00000530628 LAMB2P55268 1798 aa28.79■■■□□ 2.2
CDKN2A-210ENST00000530628 CNTNAP1P78357 1384 aa28.78■■■□□ 2.2
CDKN2A-210ENST00000530628 LMOD1P29536 600 aaPredicted RBP28.78■■■□□ 2.2
CDKN2A-210ENST00000530628 WDR43Q15061 677 aaKnown RBP eCLIP28.78■■■□□ 2.2
CDKN2A-210ENST00000530628 RUNDC1Q96C34 613 aa28.78■■■□□ 2.2
CDKN2A-210ENST00000530628 CHL1O00533 1208 aa28.77■■■□□ 2.2
CDKN2A-210ENST00000530628 MAP1SQ66K74 1059 aaPredicted RBP28.77■■■□□ 2.2
CDKN2A-210ENST00000530628 CNTROBQ8N137 903 aa28.77■■■□□ 2.2
CDKN2A-210ENST00000530628 DDX21Q9NR30 783 aaKnown RBP eCLIP28.77■■■□□ 2.2
CDKN2A-210ENST00000530628 ATP6V0A2Q9Y487 856 aa28.77■■■□□ 2.2
CDKN2A-210ENST00000530628 SLC51AQ86UW1 340 aa28.76■■■□□ 2.19
CDKN2A-210ENST00000530628 NIM1KQ8IY84 436 aa28.76■■■□□ 2.19
CDKN2A-210ENST00000530628 ABCC4O15439 1325 aa28.75■■■□□ 2.19
CDKN2A-210ENST00000530628 PPIP5K2O43314 1243 aa28.75■■■□□ 2.19
CDKN2A-210ENST00000530628 TCIRG1Q13488 830 aa28.75■■■□□ 2.19
CDKN2A-210ENST00000530628 NLRP10Q86W26 655 aa28.75■■■□□ 2.19
CDKN2A-210ENST00000530628 VPS33BQ9H267 617 aa28.75■■■□□ 2.19
CDKN2A-210ENST00000530628 KRT24Q2M2I5 525 aa28.74■■■□□ 2.19
CDKN2A-210ENST00000530628 SUPT20HQ8NEM7 779 aa28.74■■■□□ 2.19
CDKN2A-210ENST00000530628 TRMT112Q9UI30 125 aaKnown RBP28.74■■■□□ 2.19
CDKN2A-210ENST00000530628 TRIM35Q9UPQ4 493 aa28.74■■■□□ 2.19
CDKN2A-210ENST00000530628 LTBP1Q14766 1721 aa28.73■■■□□ 2.19
CDKN2A-210ENST00000530628 BBOX1O75936 387 aa28.72■■■□□ 2.19
CDKN2A-210ENST00000530628 HCLS1P14317 486 aaPredicted RBP28.72■■■□□ 2.19
CDKN2A-210ENST00000530628 AOC3Q16853 763 aa28.72■■■□□ 2.19
CDKN2A-210ENST00000530628 SH3TC1Q8TE82 1336 aa28.71■■■□□ 2.19
CDKN2A-210ENST00000530628 EPS15P42566 896 aa28.71■■■□□ 2.19
CDKN2A-210ENST00000530628 SCNN1DP51172 638 aa28.71■■■□□ 2.19
CDKN2A-210ENST00000530628 CHPF2Q9P2E5 772 aa28.71■■■□□ 2.19
CDKN2A-210ENST00000530628 CAPN15O75808 1086 aa28.7■■■□□ 2.18
CDKN2A-210ENST00000530628 VEGFBP49765 207 aa28.7■■■□□ 2.18
CDKN2A-210ENST00000530628 HDGFL1Q5TGJ6 251 aa28.7■■■□□ 2.18
CDKN2A-210ENST00000530628 DDX46Q7L014 1031 aaKnown RBP28.7■■■□□ 2.18
CDKN2A-210ENST00000530628 SP8Q8IXZ3 490 aa28.7■■■□□ 2.18
CDKN2A-210ENST00000530628 ADAMTS8Q9UP79 889 aa28.7■■■□□ 2.18
CDKN2A-210ENST00000530628 TAF1P21675 1872 aa28.7■■■□□ 2.18
CDKN2A-210ENST00000530628 DPP8Q6V1X1 898 aaPredicted RBP28.69■■■□□ 2.18
CDKN2A-210ENST00000530628 RTFDC1Q9BY42 306 aaPredicted RBP28.69■■■□□ 2.18
CDKN2A-210ENST00000530628 HOXB7P09629 217 aa28.68■■■□□ 2.18
CDKN2A-210ENST00000530628 DEFB115Q30KQ5 88 aa28.68■■■□□ 2.18
CDKN2A-210ENST00000530628 USP50Q70EL3 339 aaPredicted RBP28.68■■■□□ 2.18
CDKN2A-210ENST00000530628 MPNDQ8N594 471 aa28.68■■■□□ 2.18
CDKN2A-210ENST00000530628 PLBD2Q8NHP8 589 aa28.67■■■□□ 2.18
CDKN2A-210ENST00000530628 DBF4Q9UBU7 674 aaPredicted RBP28.67■■■□□ 2.18
CDKN2A-210ENST00000530628 ZNRF3Q9ULT6 936 aa28.67■■■□□ 2.18
CDKN2A-210ENST00000530628 GRAPQ13588 217 aa28.66■■■□□ 2.18
CDKN2A-210ENST00000530628 ANKRD13DQ6ZTN6 518 aa28.66■■■□□ 2.18
CDKN2A-210ENST00000530628 GRAPLQ8TC17 118 aaPredicted RBP28.66■■■□□ 2.18
CDKN2A-210ENST00000530628 TRPM7Q96QT4 1865 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms