RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 TRAF5O00463 557 aa15.12■□□□□ 0.01
SF3B2-208ENST00000529994 LMOD1P29536 600 aaPredicted RBP15.12■□□□□ 0.01
SF3B2-208ENST00000529994 CYP4F22Q6NT55 531 aa15.12■□□□□ 0.01
SF3B2-208ENST00000529994 CAPNS2Q96L46 248 aa15.12■□□□□ 0.01
SF3B2-208ENST00000529994 PSMD1Q99460 953 aa15.12■□□□□ 0.01
SF3B2-208ENST00000529994 MIS18AQ9NYP9 233 aa15.12■□□□□ 0.01
SF3B2-208ENST00000529994 TSKSQ9UJT2 592 aa15.12■□□□□ 0.01
SF3B2-208ENST00000529994 NUP98P52948 1817 aa15.12■□□□□ 0.01
SF3B2-208ENST00000529994 SNED1Q8TER0 1413 aa15.11■□□□□ 0.01
SF3B2-208ENST00000529994 SLC34A2O95436 690 aa15.11■□□□□ 0.01
SF3B2-208ENST00000529994 SCNN1DP51172 638 aa15.11■□□□□ 0.01
SF3B2-208ENST00000529994 LARGE2Q8N3Y3 721 aa15.11■□□□□ 0.01
SF3B2-208ENST00000529994 BEGAINQ9BUH8 593 aa15.11■□□□□ 0.01
SF3B2-208ENST00000529994 CRY2Q49AN0 593 aa15.1■□□□□ 0.01
SF3B2-208ENST00000529994 RPGRQ92834 1020 aaKnown RBP15.1■□□□□ 0.01
SF3B2-208ENST00000529994 GPR101Q96P66 508 aaPredicted RBP15.1■□□□□ 0.01
SF3B2-208ENST00000529994 U2AF1L5P0DN76 240 aaPredicted RBP15.09■□□□□ 0.01
SF3B2-208ENST00000529994 GPTP24298 496 aa15.09■□□□□ 0.01
SF3B2-208ENST00000529994 ECE1P42892 770 aa15.09■□□□□ 0.01
SF3B2-208ENST00000529994 U2AF1Q01081 240 aaKnown RBP eCLIP15.09■□□□□ 0.01
SF3B2-208ENST00000529994 CST9Q5W186 159 aa15.09■□□□□ 0.01
SF3B2-208ENST00000529994 CFAP53Q96M91 514 aa15.09■□□□□ 0.01
SF3B2-208ENST00000529994 NYXQ9GZU5 481 aa15.09■□□□□ 0.01
SF3B2-208ENST00000529994 THSD7BQ9C0I4 1608 aa15.09■□□□□ 0.01
SF3B2-208ENST00000529994 LAMB4A4D0S4 1761 aa15.08■□□□□ 0.01
SF3B2-208ENST00000529994 RGL2O15211 777 aa15.08■□□□□ 0
SF3B2-208ENST00000529994 AOC2O75106 756 aa15.08■□□□□ 0
SF3B2-208ENST00000529994 MLLT1Q03111 559 aaPredicted RBP15.08■□□□□ 0
SF3B2-208ENST00000529994 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
SF3B2-208ENST00000529994 NPC1L1Q9UHC9 1359 aa15.08■□□□□ 0
SF3B2-208ENST00000529994 CASP8AP2Q9UKL3 1982 aa15.07■□□□□ 0
SF3B2-208ENST00000529994 TAF7Q15545 349 aaPredicted RBP15.07■□□□□ 0
SF3B2-208ENST00000529994 CC2D2BQ6DHV5 1058 aa15.07■□□□□ 0
SF3B2-208ENST00000529994 TTLL7Q6ZT98 887 aa15.07■□□□□ 0
SF3B2-208ENST00000529994 NUDCQ9Y266 331 aa15.07■□□□□ 0
SF3B2-208ENST00000529994 PPEF1O14829 653 aaPredicted RBP15.06■□□□□ 0
SF3B2-208ENST00000529994 MYL6BP14649 208 aa15.06■□□□□ 0
SF3B2-208ENST00000529994 C3orf67Q6ZVT6 689 aa15.06■□□□□ 0
SF3B2-208ENST00000529994 USP50Q70EL3 339 aaPredicted RBP15.06■□□□□ 0
SF3B2-208ENST00000529994 NIM1KQ8IY84 436 aa15.06■□□□□ 0
SF3B2-208ENST00000529994 CFAP44Q96MT7 982 aa15.06■□□□□ 0
SF3B2-208ENST00000529994 ZBTB3Q9H5J0 574 aa15.06■□□□□ 0
SF3B2-208ENST00000529994 TLL2Q9Y6L7 1015 aa15.06■□□□□ 0
SF3B2-208ENST00000529994 MAP3K15Q6ZN16 1313 aa15.06■□□□□ 0
SF3B2-208ENST00000529994 UBN2Q6ZU65 1347 aa15.06■□□□□ 0
SF3B2-208ENST00000529994 ERVV-1B6SEH8 477 aa15.05■□□□□ -0
SF3B2-208ENST00000529994 PPIP5K2O43314 1243 aa15.05■□□□□ -0
SF3B2-208ENST00000529994 HOXA10P31260 410 aaPredicted RBP15.05■□□□□ -0
SF3B2-208ENST00000529994 AOC3Q16853 763 aa15.05■□□□□ -0
SF3B2-208ENST00000529994 SUSD4Q5VX71 490 aa15.05■□□□□ -0
SF3B2-208ENST00000529994 KIF6Q6ZMV9 814 aa15.05■□□□□ -0
SF3B2-208ENST00000529994 RBM17Q96I25 401 aaKnown RBP15.05■□□□□ -0
SF3B2-208ENST00000529994 DLG5Q8TDM6 1919 aa15.04■□□□□ -0
SF3B2-208ENST00000529994 CELF2O95319 508 aaKnown RBP15.04■□□□□ -0
SF3B2-208ENST00000529994 CRAMP1Q96RY5 1269 aa15.03■□□□□ -0
SF3B2-208ENST00000529994 GLIS2Q9BZE0 524 aaPredicted RBP15.03■□□□□ -0
SF3B2-208ENST00000529994 ZNF408Q9H9D4 720 aa15.03■□□□□ -0
SF3B2-208ENST00000529994 ADARB2Q9NS39 739 aaKnown RBP15.03■□□□□ -0
SF3B2-208ENST00000529994 GPRC5DQ9NZD1 345 aa15.03■□□□□ -0
SF3B2-208ENST00000529994 RIC1Q4ADV7 1423 aa15.02■□□□□ -0
SF3B2-208ENST00000529994 HTATSF1O43719 755 aaKnown RBP15.02■□□□□ -0
SF3B2-208ENST00000529994 MAP2K2P36507 400 aa15.02■□□□□ -0
SF3B2-208ENST00000529994 SAPCD2Q86UD0 394 aa15.02■□□□□ -0
SF3B2-208ENST00000529994 MCOLN1Q9GZU1 580 aa15.02■□□□□ -0
SF3B2-208ENST00000529994 KDM3BQ7LBC6 1761 aa15.02□□□□□ -0.01
SF3B2-208ENST00000529994 NTSR2O95665 410 aa15.01□□□□□ -0.01
SF3B2-208ENST00000529994 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
SF3B2-208ENST00000529994 RGS19P49795 217 aa15.01□□□□□ -0.01
SF3B2-208ENST00000529994 GMPSP49915 693 aaPredicted RBP15.01□□□□□ -0.01
SF3B2-208ENST00000529994 CXCL9Q07325 125 aa15.01□□□□□ -0.01
SF3B2-208ENST00000529994 GRIPAP1Q4V328 841 aa15.01□□□□□ -0.01
SF3B2-208ENST00000529994 ZNF34Q8IZ26 560 aa15.01□□□□□ -0.01
SF3B2-208ENST00000529994 EIF4A1P60842 406 aaKnown RBP15□□□□□ -0.01
SF3B2-208ENST00000529994 THUMPD2Q9BTF0 503 aaKnown RBP15□□□□□ -0.01
SF3B2-208ENST00000529994 TMX4Q9H1E5 349 aaPredicted RBP15□□□□□ -0.01
SF3B2-208ENST00000529994 ZNRF3Q9ULT6 936 aa15□□□□□ -0.01
SF3B2-208ENST00000529994 IBTKQ9P2D0 1353 aaPredicted RBP14.99□□□□□ -0.01
SF3B2-208ENST00000529994 RAD17O75943 681 aa14.99□□□□□ -0.01
SF3B2-208ENST00000529994 CIAPIN1Q6FI81 312 aa14.99□□□□□ -0.01
SF3B2-208ENST00000529994 GIGYF2Q6Y7W6 1299 aaKnown RBP14.99□□□□□ -0.01
SF3B2-208ENST00000529994 NLRP3Q96P20 1036 aa14.99□□□□□ -0.01
SF3B2-208ENST00000529994 BCL2L13Q9BXK5 485 aa14.99□□□□□ -0.01
SF3B2-208ENST00000529994 ATP6V0A2Q9Y487 856 aa14.99□□□□□ -0.01
SF3B2-208ENST00000529994 ABCC4O15439 1325 aa14.98□□□□□ -0.01
SF3B2-208ENST00000529994 TAF1P21675 1872 aa14.98□□□□□ -0.01
SF3B2-208ENST00000529994 SHTN1A0MZ66 631 aa14.98□□□□□ -0.01
SF3B2-208ENST00000529994 HIRAP54198 1017 aaPredicted RBP14.98□□□□□ -0.01
SF3B2-208ENST00000529994 DGKZQ13574 1117 aa14.98□□□□□ -0.01
SF3B2-208ENST00000529994 PPP1R42Q7Z4L9 355 aa14.98□□□□□ -0.01
SF3B2-208ENST00000529994 ZIC5Q96T25 663 aa14.98□□□□□ -0.01
SF3B2-208ENST00000529994 LAMB2P55268 1798 aa14.98□□□□□ -0.01
SF3B2-208ENST00000529994 TNRC18O15417 2968 aaPredicted RBP14.97□□□□□ -0.01
SF3B2-208ENST00000529994 CA12O43570 354 aa14.97□□□□□ -0.01
SF3B2-208ENST00000529994 BRPF1P55201 1214 aaPredicted RBP14.97□□□□□ -0.01
SF3B2-208ENST00000529994 DLK2Q6UY11 383 aa14.97□□□□□ -0.01
SF3B2-208ENST00000529994 DPP8Q6V1X1 898 aaPredicted RBP14.97□□□□□ -0.01
SF3B2-208ENST00000529994 TRPM4Q8TD43 1214 aa14.97□□□□□ -0.01
SF3B2-208ENST00000529994 PNISRQ8TF01 805 aaKnown RBP14.97□□□□□ -0.01
SF3B2-208ENST00000529994 POLR2AP24928 1970 aaKnown RBP14.96□□□□□ -0.01
SF3B2-208ENST00000529994 ANXA1P04083 346 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms