RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 USP44Q9H0E7 712 aa10.32□□□□□ -0.76
PABPC4-223ENST00000529216 ZBTB40Q9NUA8 1239 aa10.32□□□□□ -0.76
PABPC4-223ENST00000529216 CARMIL3Q8ND23 1372 aa10.31□□□□□ -0.76
PABPC4-223ENST00000529216 KCNA4P22459 653 aa10.31□□□□□ -0.76
PABPC4-223ENST00000529216 GPTP24298 496 aa10.31□□□□□ -0.76
PABPC4-223ENST00000529216 TBC1D9BQ66K14 1250 aa10.31□□□□□ -0.76
PABPC4-223ENST00000529216 C9orf78Q9NZ63 289 aaPredicted RBP10.31□□□□□ -0.76
PABPC4-223ENST00000529216 HDAC5Q9UQL6 1122 aa10.31□□□□□ -0.76
PABPC4-223ENST00000529216 NIP7Q9Y221 180 aaKnown RBP eCLIP10.31□□□□□ -0.76
PABPC4-223ENST00000529216 TUBGCP6Q96RT7 1819 aa10.3□□□□□ -0.76
PABPC4-223ENST00000529216 H7C1W4 665 aa10.3□□□□□ -0.76
PABPC4-223ENST00000529216 PCCAP05165 728 aaPredicted RBP10.3□□□□□ -0.76
PABPC4-223ENST00000529216 UBTFL1P0CB47 393 aaPredicted RBP10.3□□□□□ -0.76
PABPC4-223ENST00000529216 PPP1R42Q7Z4L9 355 aa10.3□□□□□ -0.76
PABPC4-223ENST00000529216 NLGN1Q8N2Q7 840 aa10.3□□□□□ -0.76
PABPC4-223ENST00000529216 ZBTB38Q8NAP3 1195 aaPredicted RBP10.3□□□□□ -0.76
PABPC4-223ENST00000529216 SETDB2Q96T68 719 aa10.3□□□□□ -0.76
PABPC4-223ENST00000529216 CDHR2Q9BYE9 1310 aa10.3□□□□□ -0.76
PABPC4-223ENST00000529216 COL24A1Q17RW2 1714 aa10.3□□□□□ -0.76
PABPC4-223ENST00000529216 ANKRD36CQ5JPF3 1778 aa10.29□□□□□ -0.76
PABPC4-223ENST00000529216 NTSR2O95665 410 aa10.29□□□□□ -0.76
PABPC4-223ENST00000529216 GNAI2P04899 355 aa10.29□□□□□ -0.76
PABPC4-223ENST00000529216 NBPF7P0C2Y1 421 aaPredicted RBP10.29□□□□□ -0.76
PABPC4-223ENST00000529216 CASP7P55210 303 aa10.29□□□□□ -0.76
PABPC4-223ENST00000529216 NFIXQ14938 502 aa10.29□□□□□ -0.76
PABPC4-223ENST00000529216 SUSD4Q5VX71 490 aa10.29□□□□□ -0.76
PABPC4-223ENST00000529216 UBE3BQ7Z3V4 1068 aa10.29□□□□□ -0.76
PABPC4-223ENST00000529216 SLC16A10Q8TF71 515 aa10.29□□□□□ -0.76
PABPC4-223ENST00000529216 UTP14AQ9BVJ6 771 aaKnown RBP10.29□□□□□ -0.76
PABPC4-223ENST00000529216 NYXQ9GZU5 481 aa10.29□□□□□ -0.76
PABPC4-223ENST00000529216 TRMT112Q9UI30 125 aaKnown RBP10.29□□□□□ -0.76
PABPC4-223ENST00000529216 TM4SF1P30408 202 aa10.28□□□□□ -0.76
PABPC4-223ENST00000529216 BICDL1Q6ZP65 573 aa10.28□□□□□ -0.76
PABPC4-223ENST00000529216 SH3TC1Q8TE82 1336 aa10.28□□□□□ -0.76
PABPC4-223ENST00000529216 RIC1Q4ADV7 1423 aa10.27□□□□□ -0.77
PABPC4-223ENST00000529216 HSP90B1P14625 803 aaKnown RBP10.27□□□□□ -0.77
PABPC4-223ENST00000529216 NBPF5PQ86XG9 351 aaPredicted RBP10.27□□□□□ -0.77
PABPC4-223ENST00000529216 SUCLG2Q96I99 432 aa10.27□□□□□ -0.77
PABPC4-223ENST00000529216 PLA2G12BQ9BX93 195 aa10.27□□□□□ -0.77
PABPC4-223ENST00000529216 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
PABPC4-223ENST00000529216 POLRMTO00411 1230 aaKnown RBP10.26□□□□□ -0.77
PABPC4-223ENST00000529216 DDR1Q08345 913 aa10.26□□□□□ -0.77
PABPC4-223ENST00000529216 MTX1Q13505 466 aa10.26□□□□□ -0.77
PABPC4-223ENST00000529216 R3HDM1Q15032 1099 aaKnown RBP10.26□□□□□ -0.77
PABPC4-223ENST00000529216 CEP85Q6P2H3 762 aa10.26□□□□□ -0.77
PABPC4-223ENST00000529216 TPTE2Q6XPS3 522 aa10.26□□□□□ -0.77
PABPC4-223ENST00000529216 RPAP2Q8IXW5 612 aaPredicted RBP10.26□□□□□ -0.77
PABPC4-223ENST00000529216 CNBD1Q8NA66 436 aa10.26□□□□□ -0.77
PABPC4-223ENST00000529216 FAM89AQ96GI7 184 aa10.26□□□□□ -0.77
PABPC4-223ENST00000529216 C1orf115Q9H7X2 142 aa10.26□□□□□ -0.77
PABPC4-223ENST00000529216 GTF3C3Q9Y5Q9 886 aa10.26□□□□□ -0.77
PABPC4-223ENST00000529216 CASZ1Q86V15 1759 aa10.26□□□□□ -0.77
PABPC4-223ENST00000529216 NUP98P52948 1817 aa10.26□□□□□ -0.77
PABPC4-223ENST00000529216 IRS4O14654 1257 aaPredicted RBP10.25□□□□□ -0.77
PABPC4-223ENST00000529216 MMP10P09238 476 aa10.25□□□□□ -0.77
PABPC4-223ENST00000529216 RABL6Q3YEC7 729 aaPredicted RBP10.25□□□□□ -0.77
PABPC4-223ENST00000529216 MSL1Q68DK7 614 aa10.25□□□□□ -0.77
PABPC4-223ENST00000529216 ANKRD44Q8N8A2 993 aa10.25□□□□□ -0.77
PABPC4-223ENST00000529216 KAZALD1Q96I82 304 aa10.25□□□□□ -0.77
PABPC4-223ENST00000529216 PDGFDQ9GZP0 370 aaPredicted RBP10.25□□□□□ -0.77
PABPC4-223ENST00000529216 BICC1Q9H694 974 aaKnown RBP10.25□□□□□ -0.77
PABPC4-223ENST00000529216 PPP4R2Q9NY27 417 aa10.25□□□□□ -0.77
PABPC4-223ENST00000529216 PCDHB15Q9Y5E8 787 aa10.25□□□□□ -0.77
PABPC4-223ENST00000529216 AFDNP55196 1824 aaKnown RBP10.25□□□□□ -0.77
PABPC4-223ENST00000529216 ABCC12Q96J65 1359 aa10.25□□□□□ -0.77
PABPC4-223ENST00000529216 FAM177BA6PVY3 158 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 PDE8AO60658 829 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 SERPINB2P05120 415 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 GTF2E1P29083 439 aaPredicted RBP10.24□□□□□ -0.77
PABPC4-223ENST00000529216 CTSWP56202 376 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 ST5P78524 1137 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 FOXO4P98177 505 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 HDAC1Q13547 482 aaPredicted RBP10.24□□□□□ -0.77
PABPC4-223ENST00000529216 ERFEQ4G0M1 354 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 RTL5Q5HYW3 569 aaPredicted RBP10.24□□□□□ -0.77
PABPC4-223ENST00000529216 SLC10A5Q5PT55 438 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 PRR5LQ6MZQ0 368 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 SYNE4Q8N205 404 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 JARID2Q92833 1246 aaPredicted RBP10.24□□□□□ -0.77
PABPC4-223ENST00000529216 MTFR1LQ9H019 292 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
PABPC4-223ENST00000529216 NPHP1O15259 732 aa10.23□□□□□ -0.77
PABPC4-223ENST00000529216 HMMRO75330 724 aa10.23□□□□□ -0.77
PABPC4-223ENST00000529216 CSF1RP07333 972 aa10.23□□□□□ -0.77
PABPC4-223ENST00000529216 ATP8B2P98198 1209 aa10.23□□□□□ -0.77
PABPC4-223ENST00000529216 EPHA10Q5JZY3 1008 aa10.23□□□□□ -0.77
PABPC4-223ENST00000529216 SIRT2Q8IXJ6 389 aa10.23□□□□□ -0.77
PABPC4-223ENST00000529216 NRXN2Q9P2S2 1712 aa10.23□□□□□ -0.77
PABPC4-223ENST00000529216 LAMB2P55268 1798 aa10.23□□□□□ -0.77
PABPC4-223ENST00000529216 RTL9Q8NET4 1388 aa10.23□□□□□ -0.77
PABPC4-223ENST00000529216 SRGAP3O43295 1099 aa10.22□□□□□ -0.77
PABPC4-223ENST00000529216 HCLS1P14317 486 aaPredicted RBP10.22□□□□□ -0.77
PABPC4-223ENST00000529216 POLA2Q14181 598 aa10.22□□□□□ -0.77
PABPC4-223ENST00000529216 LMBR1LQ6UX01 489 aa10.22□□□□□ -0.77
PABPC4-223ENST00000529216 SSH3Q8TE77 659 aa10.22□□□□□ -0.77
PABPC4-223ENST00000529216 CCDC136Q96JN2 1154 aa10.22□□□□□ -0.77
PABPC4-223ENST00000529216 RWDD1Q9H446 243 aaPredicted RBP10.22□□□□□ -0.77
PABPC4-223ENST00000529216 PNMA6EA0A0J9YXQ4 647 aa10.21□□□□□ -0.77
PABPC4-223ENST00000529216 PSDA5PKW4 1024 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms