RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 VPS53Q5VIR6 699 aa12.89□□□□□ -0.35
PUF60-213ENST00000528999 RNF20Q5VTR2 975 aa12.89□□□□□ -0.35
PUF60-213ENST00000528999 NBPF10Q6P3W6 841 aaKnown RBP12.89□□□□□ -0.35
PUF60-213ENST00000528999 NBPF15Q8N660 670 aa12.89□□□□□ -0.35
PUF60-213ENST00000528999 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
PUF60-213ENST00000528999 TTC14Q96N46 770 aa12.89□□□□□ -0.35
PUF60-213ENST00000528999 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
PUF60-213ENST00000528999 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
PUF60-213ENST00000528999 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
PUF60-213ENST00000528999 CIAO1O76071 339 aa12.88□□□□□ -0.35
PUF60-213ENST00000528999 TNNI3KQ59H18 835 aa12.88□□□□□ -0.35
PUF60-213ENST00000528999 EPHA10Q5JZY3 1008 aa12.88□□□□□ -0.35
PUF60-213ENST00000528999 HMG20BQ9P0W2 317 aa12.88□□□□□ -0.35
PUF60-213ENST00000528999 FPGT-TNNI3KV9GXZ4 949 aa12.88□□□□□ -0.35
PUF60-213ENST00000528999 WDR33Q9C0J8 1336 aaKnown RBP12.88□□□□□ -0.35
PUF60-213ENST00000528999 ZNF335Q9H4Z2 1342 aaPredicted RBP12.88□□□□□ -0.35
PUF60-213ENST00000528999 UBR2Q8IWV8 1755 aa12.87□□□□□ -0.35
PUF60-213ENST00000528999 MAP4K4O95819 1239 aaPredicted RBP12.87□□□□□ -0.35
PUF60-213ENST00000528999 IL15P40933 162 aaPredicted RBP12.87□□□□□ -0.35
PUF60-213ENST00000528999 FOXO4P98177 505 aa12.87□□□□□ -0.35
PUF60-213ENST00000528999 ANKRD1Q15327 319 aa12.87□□□□□ -0.35
PUF60-213ENST00000528999 UBE3BQ7Z3V4 1068 aa12.87□□□□□ -0.35
PUF60-213ENST00000528999 ZGPATQ8N5A5 531 aaKnown RBP12.87□□□□□ -0.35
PUF60-213ENST00000528999 CCDC8Q9H0W5 538 aaPredicted RBP12.87□□□□□ -0.35
PUF60-213ENST00000528999 LMBRD1Q9NUN5 540 aa12.87□□□□□ -0.35
PUF60-213ENST00000528999 ZDHHC9Q9Y397 364 aa12.87□□□□□ -0.35
PUF60-213ENST00000528999 CYP46A1Q9Y6A2 500 aa12.87□□□□□ -0.35
PUF60-213ENST00000528999 DDX49Q9Y6V7 483 aaKnown RBP12.87□□□□□ -0.35
PUF60-213ENST00000528999 NHSL1Q5SYE7 1610 aa12.87□□□□□ -0.35
PUF60-213ENST00000528999 KCPQ6ZWJ8 1503 aa12.87□□□□□ -0.35
PUF60-213ENST00000528999 CCDC171Q6TFL3 1326 aa12.87□□□□□ -0.35
PUF60-213ENST00000528999 GLI3P10071 1580 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 STARD3NLO95772 234 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 MBD3O95983 291 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 XRCC6P12956 609 aaKnown RBP eCLIP12.86□□□□□ -0.35
PUF60-213ENST00000528999 ZNF445P59923 1031 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 TCIRG1Q13488 830 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 KRT32Q14532 448 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.86□□□□□ -0.35
PUF60-213ENST00000528999 HAUS7Q99871 368 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 ISCA1Q9BUE6 129 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 IL25Q9H293 177 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 TMOD3Q9NYL9 352 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 PAPPAQ13219 1627 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 AK9Q5TCS8 1911 aa12.86□□□□□ -0.35
PUF60-213ENST00000528999 USPL1Q5W0Q7 1092 aa12.85□□□□□ -0.35
PUF60-213ENST00000528999 MCTP1Q6DN14 999 aa12.85□□□□□ -0.35
PUF60-213ENST00000528999 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
PUF60-213ENST00000528999 RUFY3Q7L099 469 aa12.85□□□□□ -0.35
PUF60-213ENST00000528999 DDX54Q8TDD1 881 aaKnown RBP12.85□□□□□ -0.35
PUF60-213ENST00000528999 FSD1Q9BTV5 496 aa12.85□□□□□ -0.35
PUF60-213ENST00000528999 CDCA7Q9BWT1 371 aaPredicted RBP12.85□□□□□ -0.35
PUF60-213ENST00000528999 PLA2G12BQ9BX93 195 aa12.85□□□□□ -0.35
PUF60-213ENST00000528999 GZF1Q9H116 711 aaPredicted RBP12.85□□□□□ -0.35
PUF60-213ENST00000528999 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
PUF60-213ENST00000528999 JCADQ9P266 1359 aa12.84□□□□□ -0.35
PUF60-213ENST00000528999 ATP5J2-PTCD1G3V325 749 aa12.84□□□□□ -0.35
PUF60-213ENST00000528999 PTCD1O75127 700 aaKnown RBP12.84□□□□□ -0.35
PUF60-213ENST00000528999 A1BGP04217 495 aa12.84□□□□□ -0.35
PUF60-213ENST00000528999 PTH1RQ03431 593 aa12.84□□□□□ -0.35
PUF60-213ENST00000528999 TFCP2Q12800 502 aa12.84□□□□□ -0.35
PUF60-213ENST00000528999 LRRFIP1Q32MZ4 808 aaKnown RBP12.84□□□□□ -0.35
PUF60-213ENST00000528999 HSP90AB3PQ58FF7 597 aa12.84□□□□□ -0.35
PUF60-213ENST00000528999 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
PUF60-213ENST00000528999 UPF3BQ9BZI7 483 aaKnown RBP12.84□□□□□ -0.35
PUF60-213ENST00000528999 SIL1Q9H173 461 aa12.84□□□□□ -0.35
PUF60-213ENST00000528999 PDRG1Q9NUG6 133 aa12.84□□□□□ -0.35
PUF60-213ENST00000528999 ATP6V1DQ9Y5K8 247 aa12.84□□□□□ -0.35
PUF60-213ENST00000528999 ARFGEF2Q9Y6D5 1785 aa12.84□□□□□ -0.35
PUF60-213ENST00000528999 ABCA3Q99758 1704 aa12.83□□□□□ -0.36
PUF60-213ENST00000528999 AK2P54819 239 aa12.83□□□□□ -0.36
PUF60-213ENST00000528999 NMIQ13287 307 aaPredicted RBP12.83□□□□□ -0.36
PUF60-213ENST00000528999 CREB3L3Q68CJ9 461 aa12.83□□□□□ -0.36
PUF60-213ENST00000528999 TTLL7Q6ZT98 887 aa12.83□□□□□ -0.36
PUF60-213ENST00000528999 FAM43AQ8N2R8 423 aa12.83□□□□□ -0.36
PUF60-213ENST00000528999 BOLA2Q9H3K6 86 aa12.83□□□□□ -0.36
PUF60-213ENST00000528999 DBNLQ9UJU6 430 aaKnown RBP12.83□□□□□ -0.36
PUF60-213ENST00000528999 RBM8AQ9Y5S9 174 aaKnown RBP12.83□□□□□ -0.36
PUF60-213ENST00000528999 MED23Q9ULK4 1368 aa12.82□□□□□ -0.36
PUF60-213ENST00000528999 EYA2O00167 538 aa12.82□□□□□ -0.36
PUF60-213ENST00000528999 PCCAP05165 728 aaPredicted RBP12.82□□□□□ -0.36
PUF60-213ENST00000528999 CASTP20810 708 aaKnown RBP12.82□□□□□ -0.36
PUF60-213ENST00000528999 KCNJ4P48050 445 aa12.82□□□□□ -0.36
PUF60-213ENST00000528999 PRPF40BQ6NWY9 871 aaKnown RBP12.82□□□□□ -0.36
PUF60-213ENST00000528999 KIF6Q6ZMV9 814 aa12.82□□□□□ -0.36
PUF60-213ENST00000528999 JAKMIP1Q96N16 626 aaKnown RBP12.82□□□□□ -0.36
PUF60-213ENST00000528999 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
PUF60-213ENST00000528999 HELLSQ9NRZ9 838 aa12.82□□□□□ -0.36
PUF60-213ENST00000528999 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
PUF60-213ENST00000528999 AKAP2Q9Y2D5 859 aa12.82□□□□□ -0.36
PUF60-213ENST00000528999 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
PUF60-213ENST00000528999 SLC27A2O14975 620 aa12.81□□□□□ -0.36
PUF60-213ENST00000528999 PRPF40AO75400 957 aaKnown RBP12.81□□□□□ -0.36
PUF60-213ENST00000528999 TAF5LO75529 589 aa12.81□□□□□ -0.36
PUF60-213ENST00000528999 NCLP19338 710 aaKnown RBP12.81□□□□□ -0.36
PUF60-213ENST00000528999 PKP1Q13835 747 aa12.81□□□□□ -0.36
PUF60-213ENST00000528999 CSPP1Q1MSJ5 1256 aa12.81□□□□□ -0.36
PUF60-213ENST00000528999 MCMDC2Q4G0Z9 681 aa12.81□□□□□ -0.36
PUF60-213ENST00000528999 ATG9AQ7Z3C6 839 aa12.81□□□□□ -0.36
PUF60-213ENST00000528999 KBTBD3Q8NAB2 608 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms