RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 NUTM1Q86Y26 1132 aa22.37■■□□□ 1.17
USP35-202ENST00000528910 DICER1Q9UPY3 1922 aaKnown RBP22.37■■□□□ 1.17
USP35-202ENST00000528910 GTF2E1P29083 439 aaPredicted RBP22.36■■□□□ 1.17
USP35-202ENST00000528910 NLRP10Q86W26 655 aa22.36■■□□□ 1.17
USP35-202ENST00000528910 CNKSR1Q969H4 720 aa22.36■■□□□ 1.17
USP35-202ENST00000528910 ZNF622Q969S3 477 aaKnown RBP eCLIP22.36■■□□□ 1.17
USP35-202ENST00000528910 MYH16Q9H6N6 1097 aa22.36■■□□□ 1.17
USP35-202ENST00000528910 PHAXQ9H814 394 aaKnown RBP22.36■■□□□ 1.17
USP35-202ENST00000528910 NPR1P16066 1061 aa22.35■■□□□ 1.17
USP35-202ENST00000528910 GOLGA2Q08379 1002 aa22.35■■□□□ 1.17
USP35-202ENST00000528910 ARHGAP27Q6ZUM4 889 aa22.35■■□□□ 1.17
USP35-202ENST00000528910 ISCA1Q9BUE6 129 aa22.35■■□□□ 1.17
USP35-202ENST00000528910 UTP14AQ9BVJ6 771 aaKnown RBP22.34■■□□□ 1.17
USP35-202ENST00000528910 EXOSC9Q06265 439 aaKnown RBP22.33■■□□□ 1.17
USP35-202ENST00000528910 PRPF40BQ6NWY9 871 aaKnown RBP22.33■■□□□ 1.17
USP35-202ENST00000528910 STK31Q9BXU1 1019 aa22.33■■□□□ 1.17
USP35-202ENST00000528910 VAMP4O75379 141 aa22.32■■□□□ 1.16
USP35-202ENST00000528910 SLC10A5Q5PT55 438 aa22.32■■□□□ 1.16
USP35-202ENST00000528910 TRIM28Q13263 835 aaKnown RBP22.31■■□□□ 1.16
USP35-202ENST00000528910 SH3TC1Q8TE82 1336 aa22.31■■□□□ 1.16
USP35-202ENST00000528910 DDX58O95786 925 aaKnown RBP22.3■■□□□ 1.16
USP35-202ENST00000528910 RIC3Q7Z5B4 369 aa22.3■■□□□ 1.16
USP35-202ENST00000528910 MIER1Q8N108 512 aa22.3■■□□□ 1.16
USP35-202ENST00000528910 SNED1Q8TER0 1413 aa22.3■■□□□ 1.16
USP35-202ENST00000528910 NFKBIEO00221 500 aa22.29■■□□□ 1.16
USP35-202ENST00000528910 HOXA10P31260 410 aaPredicted RBP22.29■■□□□ 1.16
USP35-202ENST00000528910 MYH3P11055 1940 aa22.28■■□□□ 1.16
USP35-202ENST00000528910 RASSF7Q02833 373 aa22.28■■□□□ 1.16
USP35-202ENST00000528910 SOGA3Q5TF21 947 aa22.28■■□□□ 1.16
USP35-202ENST00000528910 C3orf67Q6ZVT6 689 aa22.28■■□□□ 1.16
USP35-202ENST00000528910 C7orf43Q8WVR3 580 aa22.28■■□□□ 1.16
USP35-202ENST00000528910 TRMT112Q9UI30 125 aaKnown RBP22.28■■□□□ 1.16
USP35-202ENST00000528910 LRRC37AA6NMS7 1700 aa22.28■■□□□ 1.16
USP35-202ENST00000528910 LTBP3Q9NS15 1303 aa22.28■■□□□ 1.16
USP35-202ENST00000528910 E9PSI1 815 aa22.27■■□□□ 1.16
USP35-202ENST00000528910 ATP5J2-PTCD1G3V325 749 aa22.27■■□□□ 1.16
USP35-202ENST00000528910 TCERG1O14776 1098 aaKnown RBP22.27■■□□□ 1.16
USP35-202ENST00000528910 C21orf2O43822 256 aa22.27■■□□□ 1.16
USP35-202ENST00000528910 METTL22Q9BUU2 404 aaPredicted RBP22.27■■□□□ 1.16
USP35-202ENST00000528910 TAF1P21675 1872 aa22.26■■□□□ 1.15
USP35-202ENST00000528910 SLC4A2P04920 1241 aa22.26■■□□□ 1.15
USP35-202ENST00000528910 ALDH1B1P30837 517 aa22.26■■□□□ 1.15
USP35-202ENST00000528910 C9orf131Q5VYM1 1079 aa22.26■■□□□ 1.15
USP35-202ENST00000528910 KSR2Q6VAB6 950 aa22.26■■□□□ 1.15
USP35-202ENST00000528910 G2E3Q7L622 706 aa22.26■■□□□ 1.15
USP35-202ENST00000528910 RPGRQ92834 1020 aaKnown RBP22.26■■□□□ 1.15
USP35-202ENST00000528910 NLRP3Q96P20 1036 aa22.26■■□□□ 1.15
USP35-202ENST00000528910 PRELPP51888 382 aa22.25■■□□□ 1.15
USP35-202ENST00000528910 FLIIQ13045 1269 aa22.25■■□□□ 1.15
USP35-202ENST00000528910 CRAMP1Q96RY5 1269 aa22.25■■□□□ 1.15
USP35-202ENST00000528910 MYD88Q99836 296 aa22.25■■□□□ 1.15
USP35-202ENST00000528910 MAP3K2Q9Y2U5 619 aa22.25■■□□□ 1.15
USP35-202ENST00000528910 ZC3H4Q9UPT8 1303 aaKnown RBP22.25■■□□□ 1.15
USP35-202ENST00000528910 SLFN5Q08AF3 891 aa22.24■■□□□ 1.15
USP35-202ENST00000528910 SYNE4Q8N205 404 aa22.24■■□□□ 1.15
USP35-202ENST00000528910 CCDC191Q8NCU4 936 aa22.24■■□□□ 1.15
USP35-202ENST00000528910 RNF181Q9P0P0 153 aa22.24■■□□□ 1.15
USP35-202ENST00000528910 PI4KAP2A4QPH2 592 aa22.23■■□□□ 1.15
USP35-202ENST00000528910 LMNB1P20700 586 aa22.23■■□□□ 1.15
USP35-202ENST00000528910 CCDC93Q567U6 631 aa22.23■■□□□ 1.15
USP35-202ENST00000528910 PI4KAP1Q8N8J0 262 aa22.23■■□□□ 1.15
USP35-202ENST00000528910 ZNF219Q9P2Y4 722 aaPredicted RBP22.23■■□□□ 1.15
USP35-202ENST00000528910 HCLS1P14317 486 aaPredicted RBP22.22■■□□□ 1.15
USP35-202ENST00000528910 RBM17Q96I25 401 aaKnown RBP22.22■■□□□ 1.15
USP35-202ENST00000528910 TAOK3Q9H2K8 898 aa22.22■■□□□ 1.15
USP35-202ENST00000528910 ZBTB38Q8NAP3 1195 aaPredicted RBP22.21■■□□□ 1.15
USP35-202ENST00000528910 FAM89AQ96GI7 184 aa22.21■■□□□ 1.15
USP35-202ENST00000528910 CWC25Q9NXE8 425 aaPredicted RBP22.21■■□□□ 1.15
USP35-202ENST00000528910 ABCC4O15439 1325 aa22.21■■□□□ 1.15
USP35-202ENST00000528910 COL4A1P02462 1669 aa22.2■■□□□ 1.15
USP35-202ENST00000528910 IGKV5-2P06315 115 aa22.2■■□□□ 1.14
USP35-202ENST00000528910 TRMT2AQ8IZ69 625 aaKnown RBP22.2■■□□□ 1.14
USP35-202ENST00000528910 PCCAP05165 728 aaPredicted RBP22.19■■□□□ 1.14
USP35-202ENST00000528910 FKBP5Q13451 457 aaPredicted RBP22.19■■□□□ 1.14
USP35-202ENST00000528910 CC2D2BQ6DHV5 1058 aa22.19■■□□□ 1.14
USP35-202ENST00000528910 ZNF428Q96B54 188 aa22.19■■□□□ 1.14
USP35-202ENST00000528910 LTBP1Q14766 1721 aa22.18■■□□□ 1.14
USP35-202ENST00000528910 CDHR2Q9BYE9 1310 aa22.18■■□□□ 1.14
USP35-202ENST00000528910 IRS4O14654 1257 aaPredicted RBP22.18■■□□□ 1.14
USP35-202ENST00000528910 PPEF1O14829 653 aaPredicted RBP22.18■■□□□ 1.14
USP35-202ENST00000528910 NEXNQ0ZGT2 675 aa22.18■■□□□ 1.14
USP35-202ENST00000528910 SF3B3Q15393 1217 aaKnown RBP22.18■■□□□ 1.14
USP35-202ENST00000528910 OLFM4Q6UX06 510 aa22.18■■□□□ 1.14
USP35-202ENST00000528910 CDCA7LQ96GN5 454 aa22.18■■□□□ 1.14
USP35-202ENST00000528910 NEURL1BA8MQ27 555 aa22.17■■□□□ 1.14
USP35-202ENST00000528910 FKBP4Q02790 459 aaKnown RBP eCLIP22.17■■□□□ 1.14
USP35-202ENST00000528910 RTKN2Q8IZC4 609 aa22.17■■□□□ 1.14
USP35-202ENST00000528910 DNAAF4Q8WXU2 420 aa22.17■■□□□ 1.14
USP35-202ENST00000528910 GPBP1L1Q9HC44 474 aaPredicted RBP22.17■■□□□ 1.14
USP35-202ENST00000528910 ZNF526Q8TF50 670 aaPredicted RBP22.16■■□□□ 1.14
USP35-202ENST00000528910 DUOX1Q9NRD9 1551 aa22.16■■□□□ 1.14
USP35-202ENST00000528910 WDR90Q96KV7 1748 aa22.15■■□□□ 1.14
USP35-202ENST00000528910 HSP90B1P14625 803 aaKnown RBP22.15■■□□□ 1.14
USP35-202ENST00000528910 GRAPQ13588 217 aa22.15■■□□□ 1.14
USP35-202ENST00000528910 GRIPAP1Q4V328 841 aa22.15■■□□□ 1.14
USP35-202ENST00000528910 GRAPLQ8TC17 118 aaPredicted RBP22.15■■□□□ 1.14
USP35-202ENST00000528910 PSMD1Q99460 953 aa22.15■■□□□ 1.14
USP35-202ENST00000528910 CWF19L2Q2TBE0 894 aaKnown RBP22.14■■□□□ 1.13
USP35-202ENST00000528910 RTL5Q5HYW3 569 aaPredicted RBP22.14■■□□□ 1.13
USP35-202ENST00000528910 DDX46Q7L014 1031 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms