RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-204ENST00000528699 C3orf67Q6ZVT6 689 aa14.03□□□□□ -0.16
SIPA1-204ENST00000528699 COPS6Q7L5N1 327 aa14.03□□□□□ -0.16
SIPA1-204ENST00000528699 XAGE3Q8WTP9 111 aa14.03□□□□□ -0.16
SIPA1-204ENST00000528699 NECTIN2Q92692 538 aa14.03□□□□□ -0.16
SIPA1-204ENST00000528699 MBIPQ9NS73 344 aa14.03□□□□□ -0.16
SIPA1-204ENST00000528699 CHPF2Q9P2E5 772 aa14.03□□□□□ -0.16
SIPA1-204ENST00000528699 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
SIPA1-204ENST00000528699 RNF123Q5XPI4 1314 aa14.03□□□□□ -0.16
SIPA1-204ENST00000528699 ANP32CO43423 234 aa14.02□□□□□ -0.17
SIPA1-204ENST00000528699 VEGFAP15692 232 aaPredicted RBP14.02□□□□□ -0.17
SIPA1-204ENST00000528699 HDGFL1Q5TGJ6 251 aa14.02□□□□□ -0.17
SIPA1-204ENST00000528699 PPP1R42Q7Z4L9 355 aa14.02□□□□□ -0.17
SIPA1-204ENST00000528699 RTKN2Q8IZC4 609 aa14.02□□□□□ -0.17
SIPA1-204ENST00000528699 HSP90AB3PQ58FF7 597 aa14.01□□□□□ -0.17
SIPA1-204ENST00000528699 SLC10A5Q5PT55 438 aa14.01□□□□□ -0.17
SIPA1-204ENST00000528699 DPY19L2Q6NUT2 758 aa14.01□□□□□ -0.17
SIPA1-204ENST00000528699 SMC1BQ8NDV3 1235 aa14.01□□□□□ -0.17
SIPA1-204ENST00000528699 UTP14AQ9BVJ6 771 aaKnown RBP14.01□□□□□ -0.17
SIPA1-204ENST00000528699 IFT57Q9NWB7 429 aa14.01□□□□□ -0.17
SIPA1-204ENST00000528699 LAMB2P55268 1798 aa14.01□□□□□ -0.17
SIPA1-204ENST00000528699 AIMP1Q12904 312 aaKnown RBP14□□□□□ -0.17
SIPA1-204ENST00000528699 NLRP10Q86W26 655 aa14□□□□□ -0.17
SIPA1-204ENST00000528699 RPGRQ92834 1020 aaKnown RBP14□□□□□ -0.17
SIPA1-204ENST00000528699 CRAMP1Q96RY5 1269 aa14□□□□□ -0.17
SIPA1-204ENST00000528699 PSMD1Q99460 953 aa14□□□□□ -0.17
SIPA1-204ENST00000528699 ZNF277Q9NRM2 450 aaPredicted RBP14□□□□□ -0.17
SIPA1-204ENST00000528699 DBF4Q9UBU7 674 aaPredicted RBP14□□□□□ -0.17
SIPA1-204ENST00000528699 COL4A5P29400 1685 aa13.99□□□□□ -0.17
SIPA1-204ENST00000528699 GNAI1P63096 354 aa13.99□□□□□ -0.17
SIPA1-204ENST00000528699 CALD1Q05682 793 aaKnown RBP13.99□□□□□ -0.17
SIPA1-204ENST00000528699 TCIRG1Q13488 830 aa13.99□□□□□ -0.17
SIPA1-204ENST00000528699 DUSP27Q5VZP5 1158 aa13.99□□□□□ -0.17
SIPA1-204ENST00000528699 CC2D2BQ6DHV5 1058 aa13.99□□□□□ -0.17
SIPA1-204ENST00000528699 SLC51AQ86UW1 340 aa13.99□□□□□ -0.17
SIPA1-204ENST00000528699 RBM17Q96I25 401 aaKnown RBP13.99□□□□□ -0.17
SIPA1-204ENST00000528699 ZNF541Q9H0D2 1346 aa13.98□□□□□ -0.17
SIPA1-204ENST00000528699 DDNO94850 711 aaPredicted RBP13.98□□□□□ -0.17
SIPA1-204ENST00000528699 IARSP41252 1262 aaKnown RBP13.98□□□□□ -0.17
SIPA1-204ENST00000528699 DNAJC5GQ8N7S2 189 aa13.98□□□□□ -0.17
SIPA1-204ENST00000528699 PLBD2Q8NHP8 589 aa13.98□□□□□ -0.17
SIPA1-204ENST00000528699 L3MBTL3Q96JM7 780 aaPredicted RBP13.98□□□□□ -0.17
SIPA1-204ENST00000528699 NLRP3Q96P20 1036 aa13.98□□□□□ -0.17
SIPA1-204ENST00000528699 MRS2Q9HD23 443 aa13.98□□□□□ -0.17
SIPA1-204ENST00000528699 SCN4AP35499 1836 aa13.97□□□□□ -0.17
SIPA1-204ENST00000528699 ABCC4O15439 1325 aa13.97□□□□□ -0.17
SIPA1-204ENST00000528699 PPEF1O14829 653 aaPredicted RBP13.97□□□□□ -0.17
SIPA1-204ENST00000528699 SYNE4Q8N205 404 aa13.97□□□□□ -0.17
SIPA1-204ENST00000528699 HYPKQ9NX55 129 aa13.97□□□□□ -0.17
SIPA1-204ENST00000528699 DDX60Q8IY21 1712 aaKnown RBP13.97□□□□□ -0.17
SIPA1-204ENST00000528699 SH3TC1Q8TE82 1336 aa13.96□□□□□ -0.17
SIPA1-204ENST00000528699 FZD9O00144 591 aa13.96□□□□□ -0.17
SIPA1-204ENST00000528699 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
SIPA1-204ENST00000528699 ANKRD13DQ6ZTN6 518 aa13.96□□□□□ -0.17
SIPA1-204ENST00000528699 ISCA1Q9BUE6 129 aa13.96□□□□□ -0.17
SIPA1-204ENST00000528699 TRMT112Q9UI30 125 aaKnown RBP13.96□□□□□ -0.17
SIPA1-204ENST00000528699 HCLS1P14317 486 aaPredicted RBP13.95□□□□□ -0.18
SIPA1-204ENST00000528699 HTRA3P83110 453 aa13.95□□□□□ -0.18
SIPA1-204ENST00000528699 CCDC27Q2M243 656 aa13.95□□□□□ -0.18
SIPA1-204ENST00000528699 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
SIPA1-204ENST00000528699 ADAMTSL1Q8N6G6 1762 aa13.94□□□□□ -0.18
SIPA1-204ENST00000528699 IQCA1LA6NCM1 817 aa13.94□□□□□ -0.18
SIPA1-204ENST00000528699 LRRC37AA6NMS7 1700 aa13.94□□□□□ -0.18
SIPA1-204ENST00000528699 POTEIP0CG38 1075 aa13.94□□□□□ -0.18
SIPA1-204ENST00000528699 POTEJP0CG39 1038 aa13.94□□□□□ -0.18
SIPA1-204ENST00000528699 C8orf58Q8NAV2 365 aa13.94□□□□□ -0.18
SIPA1-204ENST00000528699 ATP6V0A2Q9Y487 856 aa13.94□□□□□ -0.18
SIPA1-204ENST00000528699 CACNA1FO60840 1977 aa13.93□□□□□ -0.18
SIPA1-204ENST00000528699 ELL2O00472 640 aaPredicted RBP13.93□□□□□ -0.18
SIPA1-204ENST00000528699 DUOX1Q9NRD9 1551 aa13.92□□□□□ -0.18
SIPA1-204ENST00000528699 ATP5J2-PTCD1G3V325 749 aa13.92□□□□□ -0.18
SIPA1-204ENST00000528699 TCERG1O14776 1098 aaKnown RBP13.92□□□□□ -0.18
SIPA1-204ENST00000528699 TRIM28Q13263 835 aaKnown RBP13.92□□□□□ -0.18
SIPA1-204ENST00000528699 CHADLQ6NUI6 762 aa13.92□□□□□ -0.18
SIPA1-204ENST00000528699 WWC1Q8IX03 1113 aa13.92□□□□□ -0.18
SIPA1-204ENST00000528699 GPC2Q8N158 579 aa13.92□□□□□ -0.18
SIPA1-204ENST00000528699 JDP2Q8WYK2 163 aa13.92□□□□□ -0.18
SIPA1-204ENST00000528699 KLRG1Q96E93 195 aa13.92□□□□□ -0.18
SIPA1-204ENST00000528699 RTFDC1Q9BY42 306 aaPredicted RBP13.92□□□□□ -0.18
SIPA1-204ENST00000528699 TAF1DQ9H5J8 278 aaPredicted RBP13.92□□□□□ -0.18
SIPA1-204ENST00000528699 PHAXQ9H814 394 aaKnown RBP13.92□□□□□ -0.18
SIPA1-204ENST00000528699 COL4A1P02462 1669 aa13.91□□□□□ -0.18
SIPA1-204ENST00000528699 PCNTO95613 3336 aa13.91□□□□□ -0.18
SIPA1-204ENST00000528699 LTBP1Q14766 1721 aa13.91□□□□□ -0.18
SIPA1-204ENST00000528699 BBOX1O75936 387 aa13.91□□□□□ -0.18
SIPA1-204ENST00000528699 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
SIPA1-204ENST00000528699 GRAPQ13588 217 aa13.91□□□□□ -0.18
SIPA1-204ENST00000528699 SP8Q8IXZ3 490 aa13.91□□□□□ -0.18
SIPA1-204ENST00000528699 TSPYL6Q8N831 410 aa13.91□□□□□ -0.18
SIPA1-204ENST00000528699 GRAPLQ8TC17 118 aaPredicted RBP13.91□□□□□ -0.18
SIPA1-204ENST00000528699 TSR2Q969E8 191 aaKnown RBP13.91□□□□□ -0.18
SIPA1-204ENST00000528699 ZNF428Q96B54 188 aa13.91□□□□□ -0.18
SIPA1-204ENST00000528699 FAM89AQ96GI7 184 aa13.91□□□□□ -0.18
SIPA1-204ENST00000528699 TAF1P21675 1872 aa13.91□□□□□ -0.18
SIPA1-204ENST00000528699 SF3B3Q15393 1217 aaKnown RBP13.9□□□□□ -0.18
SIPA1-204ENST00000528699 DDX46Q7L014 1031 aaKnown RBP13.9□□□□□ -0.18
SIPA1-204ENST00000528699 LDHDQ86WU2 507 aa13.9□□□□□ -0.18
SIPA1-204ENST00000528699 LARGE2Q8N3Y3 721 aa13.9□□□□□ -0.18
SIPA1-204ENST00000528699 JMYQ8N9B5 988 aa13.9□□□□□ -0.18
SIPA1-204ENST00000528699 VPS33BQ9H267 617 aa13.9□□□□□ -0.18
SIPA1-204ENST00000528699 HACL1Q9UJ83 578 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms