RNA–Protein interactions for RNA: ENST00000528281.5

CNKSR1-212, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-212ENST00000528281 CCDC93Q567U6 631 aa23.13■■□□□ 1.29
CNKSR1-212ENST00000528281 DBF4Q9UBU7 674 aaPredicted RBP23.13■■□□□ 1.29
CNKSR1-212ENST00000528281 GLTPD2A6NH11 291 aa23.12■■□□□ 1.29
CNKSR1-212ENST00000528281 UTP14AQ9BVJ6 771 aaKnown RBP23.11■■□□□ 1.29
CNKSR1-212ENST00000528281 RRAGCQ9HB90 399 aa23.11■■□□□ 1.29
CNKSR1-212ENST00000528281 MRS2Q9HD23 443 aa23.11■■□□□ 1.29
CNKSR1-212ENST00000528281 RNF123Q5XPI4 1314 aa23.1■■□□□ 1.29
CNKSR1-212ENST00000528281 HSPA6P17066 643 aa23.1■■□□□ 1.29
CNKSR1-212ENST00000528281 TCIRG1Q13488 830 aa23.1■■□□□ 1.29
CNKSR1-212ENST00000528281 C16orf71Q8IYS4 520 aaPredicted RBP23.1■■□□□ 1.29
CNKSR1-212ENST00000528281 RPGRQ92834 1020 aaKnown RBP23.1■■□□□ 1.29
CNKSR1-212ENST00000528281 HOXA10P31260 410 aaPredicted RBP23.09■■□□□ 1.29
CNKSR1-212ENST00000528281 RTKN2Q8IZC4 609 aa23.09■■□□□ 1.29
CNKSR1-212ENST00000528281 HYPKQ9NX55 129 aa23.09■■□□□ 1.29
CNKSR1-212ENST00000528281 CCDC27Q2M243 656 aa23.08■■□□□ 1.29
CNKSR1-212ENST00000528281 SLC10A5Q5PT55 438 aa23.08■■□□□ 1.29
CNKSR1-212ENST00000528281 DPY19L2Q6NUT2 758 aa23.08■■□□□ 1.29
CNKSR1-212ENST00000528281 PLBD2Q8NHP8 589 aa23.08■■□□□ 1.29
CNKSR1-212ENST00000528281 RBM46Q8TBY0 533 aaKnown RBP23.08■■□□□ 1.29
CNKSR1-212ENST00000528281 FKBP4Q02790 459 aaKnown RBP eCLIP23.07■■□□□ 1.28
CNKSR1-212ENST00000528281 ANKRD13DQ6ZTN6 518 aa23.07■■□□□ 1.28
CNKSR1-212ENST00000528281 NLRP10Q86W26 655 aa23.07■■□□□ 1.28
CNKSR1-212ENST00000528281 RBM17Q96I25 401 aaKnown RBP23.07■■□□□ 1.28
CNKSR1-212ENST00000528281 NLRP3Q96P20 1036 aa23.07■■□□□ 1.28
CNKSR1-212ENST00000528281 NCBP3Q53F19 620 aaKnown RBP23.06■■□□□ 1.28
CNKSR1-212ENST00000528281 CRAMP1Q96RY5 1269 aa23.06■■□□□ 1.28
CNKSR1-212ENST00000528281 WDR90Q96KV7 1748 aa23.05■■□□□ 1.28
CNKSR1-212ENST00000528281 CC2D2BQ6DHV5 1058 aa23.05■■□□□ 1.28
CNKSR1-212ENST00000528281 OLFM4Q6UX06 510 aa23.05■■□□□ 1.28
CNKSR1-212ENST00000528281 CHMP4AQ9BY43 222 aa23.05■■□□□ 1.28
CNKSR1-212ENST00000528281 LAMB2P55268 1798 aa23.04■■□□□ 1.28
CNKSR1-212ENST00000528281 ELL2O00472 640 aaPredicted RBP23.04■■□□□ 1.28
CNKSR1-212ENST00000528281 VEGFAP15692 232 aaPredicted RBP23.04■■□□□ 1.28
CNKSR1-212ENST00000528281 C3orf67Q6ZVT6 689 aa23.04■■□□□ 1.28
CNKSR1-212ENST00000528281 WWC1Q8IX03 1113 aa23.04■■□□□ 1.28
CNKSR1-212ENST00000528281 C8orf58Q8NAV2 365 aa23.03■■□□□ 1.28
CNKSR1-212ENST00000528281 TRMT112Q9UI30 125 aaKnown RBP23.03■■□□□ 1.28
CNKSR1-212ENST00000528281 SH3TC1Q8TE82 1336 aa23.03■■□□□ 1.28
CNKSR1-212ENST00000528281 SNED1Q8TER0 1413 aa23.02■■□□□ 1.28
CNKSR1-212ENST00000528281 FSTL1Q12841 308 aa23.02■■□□□ 1.28
CNKSR1-212ENST00000528281 GRIPAP1Q4V328 841 aa23.02■■□□□ 1.28
CNKSR1-212ENST00000528281 ISCA1Q9BUE6 129 aa23.02■■□□□ 1.28
CNKSR1-212ENST00000528281 SYNE4Q8N205 404 aa23.01■■□□□ 1.27
CNKSR1-212ENST00000528281 PSMD1Q99460 953 aa23.01■■□□□ 1.27
CNKSR1-212ENST00000528281 ZNF277Q9NRM2 450 aaPredicted RBP23.01■■□□□ 1.27
CNKSR1-212ENST00000528281 PPEF1O14829 653 aaPredicted RBP23■■□□□ 1.27
CNKSR1-212ENST00000528281 CCDC30Q5VVM6 783 aa23■■□□□ 1.27
CNKSR1-212ENST00000528281 IL16Q14005 1332 aa23■■□□□ 1.27
CNKSR1-212ENST00000528281 POTECB2RU33 542 aa22.99■■□□□ 1.27
CNKSR1-212ENST00000528281 HCLS1P14317 486 aaPredicted RBP22.99■■□□□ 1.27
CNKSR1-212ENST00000528281 IARSP41252 1262 aaKnown RBP22.99■■□□□ 1.27
CNKSR1-212ENST00000528281 APLP1P51693 650 aa22.99■■□□□ 1.27
CNKSR1-212ENST00000528281 GOLGA2Q08379 1002 aa22.99■■□□□ 1.27
CNKSR1-212ENST00000528281 TSR2Q969E8 191 aaKnown RBP22.99■■□□□ 1.27
CNKSR1-212ENST00000528281 PHAXQ9H814 394 aaKnown RBP22.99■■□□□ 1.27
CNKSR1-212ENST00000528281 TRIM28Q13263 835 aaKnown RBP22.98■■□□□ 1.27
CNKSR1-212ENST00000528281 RIC3Q7Z5B4 369 aa22.98■■□□□ 1.27
CNKSR1-212ENST00000528281 TSPYL6Q8N831 410 aa22.98■■□□□ 1.27
CNKSR1-212ENST00000528281 SMC1BQ8NDV3 1235 aa22.98■■□□□ 1.27
CNKSR1-212ENST00000528281 DDX60Q8IY21 1712 aaKnown RBP22.98■■□□□ 1.27
CNKSR1-212ENST00000528281 ATP5J2-PTCD1G3V325 749 aa22.97■■□□□ 1.27
CNKSR1-212ENST00000528281 DDNO94850 711 aaPredicted RBP22.97■■□□□ 1.27
CNKSR1-212ENST00000528281 TMX4Q9H1E5 349 aaPredicted RBP22.97■■□□□ 1.27
CNKSR1-212ENST00000528281 ABCC4O15439 1325 aa22.97■■□□□ 1.27
CNKSR1-212ENST00000528281 CEP350Q5VT06 3117 aa22.96■■□□□ 1.27
CNKSR1-212ENST00000528281 TCERG1O14776 1098 aaKnown RBP22.95■■□□□ 1.26
CNKSR1-212ENST00000528281 BBOX1O75936 387 aa22.95■■□□□ 1.26
CNKSR1-212ENST00000528281 ATP6V0A2Q9Y487 856 aa22.95■■□□□ 1.26
CNKSR1-212ENST00000528281 SCN4AP35499 1836 aa22.94■■□□□ 1.26
CNKSR1-212ENST00000528281 DDX58O95786 925 aaKnown RBP22.94■■□□□ 1.26
CNKSR1-212ENST00000528281 DDX46Q7L014 1031 aaKnown RBP22.94■■□□□ 1.26
CNKSR1-212ENST00000528281 FAM89AQ96GI7 184 aa22.94■■□□□ 1.26
CNKSR1-212ENST00000528281 FZD9O00144 591 aa22.93■■□□□ 1.26
CNKSR1-212ENST00000528281 TWISTNBQ3B726 338 aaPredicted RBP22.93■■□□□ 1.26
CNKSR1-212ENST00000528281 WDR63Q8IWG1 891 aa22.93■■□□□ 1.26
CNKSR1-212ENST00000528281 JDP2Q8WYK2 163 aa22.93■■□□□ 1.26
CNKSR1-212ENST00000528281 ZNF428Q96B54 188 aa22.93■■□□□ 1.26
CNKSR1-212ENST00000528281 L3MBTL3Q96JM7 780 aaPredicted RBP22.93■■□□□ 1.26
CNKSR1-212ENST00000528281 TAF1P21675 1872 aa22.92■■□□□ 1.26
CNKSR1-212ENST00000528281 ZNF541Q9H0D2 1346 aa22.92■■□□□ 1.26
CNKSR1-212ENST00000528281 IQCA1LA6NCM1 817 aa22.92■■□□□ 1.26
CNKSR1-212ENST00000528281 GRAPQ13588 217 aa22.92■■□□□ 1.26
CNKSR1-212ENST00000528281 SP8Q8IXZ3 490 aa22.92■■□□□ 1.26
CNKSR1-212ENST00000528281 GRAPLQ8TC17 118 aaPredicted RBP22.92■■□□□ 1.26
CNKSR1-212ENST00000528281 STK31Q9BXU1 1019 aa22.92■■□□□ 1.26
CNKSR1-212ENST00000528281 SF3B3Q15393 1217 aaKnown RBP22.91■■□□□ 1.26
CNKSR1-212ENST00000528281 SLC51AQ86UW1 340 aa22.91■■□□□ 1.26
CNKSR1-212ENST00000528281 MYD88Q99836 296 aa22.91■■□□□ 1.26
CNKSR1-212ENST00000528281 TMC4Q7Z404 712 aa22.9■■□□□ 1.26
CNKSR1-212ENST00000528281 FAM9BQ8IZU0 186 aa22.9■■□□□ 1.26
CNKSR1-212ENST00000528281 ZBTB38Q8NAP3 1195 aaPredicted RBP22.9■■□□□ 1.26
CNKSR1-212ENST00000528281 CCDC191Q8NCU4 936 aa22.9■■□□□ 1.26
CNKSR1-212ENST00000528281 METTL22Q9BUU2 404 aaPredicted RBP22.9■■□□□ 1.26
CNKSR1-212ENST00000528281 VPS33BQ9H267 617 aa22.9■■□□□ 1.26
CNKSR1-212ENST00000528281 SALL2Q9Y467 1007 aaPredicted RBP22.9■■□□□ 1.26
CNKSR1-212ENST00000528281 FANCIQ9NVI1 1328 aa22.89■■□□□ 1.26
CNKSR1-212ENST00000528281 IRS4O14654 1257 aaPredicted RBP22.89■■□□□ 1.25
CNKSR1-212ENST00000528281 LARGE2Q8N3Y3 721 aa22.89■■□□□ 1.25
CNKSR1-212ENST00000528281 SUPT20HQ8NEM7 779 aa22.89■■□□□ 1.25
CNKSR1-212ENST00000528281 COL4A5P29400 1685 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms