RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 TSR2Q969E8 191 aaKnown RBP15.64■□□□□ 0.09
TRAPPC4-209ENST00000528230 GPBP1L1Q9HC44 474 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC4-209ENST00000528230 CACNA1FO60840 1977 aa15.64■□□□□ 0.09
TRAPPC4-209ENST00000528230 SENP3-EIF4A1A0A087X0R7 540 aa15.63■□□□□ 0.09
TRAPPC4-209ENST00000528230 LMNB1P20700 586 aa15.63■□□□□ 0.09
TRAPPC4-209ENST00000528230 TSPYL6Q8N831 410 aa15.63■□□□□ 0.09
TRAPPC4-209ENST00000528230 TNRC6CQ9HCJ0 1690 aaKnown RBP15.63■□□□□ 0.09
TRAPPC4-209ENST00000528230 ZC3H4Q9UPT8 1303 aaKnown RBP15.63■□□□□ 0.09
TRAPPC4-209ENST00000528230 ABCC12Q96J65 1359 aa15.62■□□□□ 0.09
TRAPPC4-209ENST00000528230 DICER1Q9UPY3 1922 aaKnown RBP15.62■□□□□ 0.09
TRAPPC4-209ENST00000528230 HOXA10P31260 410 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC4-209ENST00000528230 TRIM28Q13263 835 aaKnown RBP15.62■□□□□ 0.09
TRAPPC4-209ENST00000528230 C7orf43Q8WVR3 580 aa15.62■□□□□ 0.09
TRAPPC4-209ENST00000528230 NLRP3Q96P20 1036 aa15.62■□□□□ 0.09
TRAPPC4-209ENST00000528230 ISCA1Q9BUE6 129 aa15.62■□□□□ 0.09
TRAPPC4-209ENST00000528230 RNF181Q9P0P0 153 aa15.62■□□□□ 0.09
TRAPPC4-209ENST00000528230 SALL2Q9Y467 1007 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC4-209ENST00000528230 LTBP3Q9NS15 1303 aa15.62■□□□□ 0.09
TRAPPC4-209ENST00000528230 NFKBIEO00221 500 aa15.61■□□□□ 0.09
TRAPPC4-209ENST00000528230 GOLGA2Q08379 1002 aa15.61■□□□□ 0.09
TRAPPC4-209ENST00000528230 TWISTNBQ3B726 338 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC4-209ENST00000528230 PHAXQ9H814 394 aaKnown RBP15.61■□□□□ 0.09
TRAPPC4-209ENST00000528230 CCER2I3L3R5 266 aa15.6■□□□□ 0.09
TRAPPC4-209ENST00000528230 RASSF7Q02833 373 aa15.6■□□□□ 0.09
TRAPPC4-209ENST00000528230 RIC3Q7Z5B4 369 aa15.6■□□□□ 0.09
TRAPPC4-209ENST00000528230 RPGRQ92834 1020 aaKnown RBP15.6■□□□□ 0.09
TRAPPC4-209ENST00000528230 RBM17Q96I25 401 aaKnown RBP15.6■□□□□ 0.09
TRAPPC4-209ENST00000528230 CRAMP1Q96RY5 1269 aa15.6■□□□□ 0.09
TRAPPC4-209ENST00000528230 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC4-209ENST00000528230 FANCIQ9NVI1 1328 aa15.6■□□□□ 0.09
TRAPPC4-209ENST00000528230 DDX58O95786 925 aaKnown RBP15.59■□□□□ 0.09
TRAPPC4-209ENST00000528230 CCDC93Q567U6 631 aa15.59■□□□□ 0.09
TRAPPC4-209ENST00000528230 ZNF526Q8TF50 670 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC4-209ENST00000528230 STK31Q9BXU1 1019 aa15.59■□□□□ 0.09
TRAPPC4-209ENST00000528230 TAOK3Q9H2K8 898 aa15.59■□□□□ 0.09
TRAPPC4-209ENST00000528230 TRMT112Q9UI30 125 aaKnown RBP15.59■□□□□ 0.09
TRAPPC4-209ENST00000528230 SH3TC1Q8TE82 1336 aa15.59■□□□□ 0.09
TRAPPC4-209ENST00000528230 LAMB2P55268 1798 aa15.58■□□□□ 0.08
TRAPPC4-209ENST00000528230 PRELPP51888 382 aa15.58■□□□□ 0.08
TRAPPC4-209ENST00000528230 C1QTNF8P60827 252 aa15.58■□□□□ 0.08
TRAPPC4-209ENST00000528230 GRIPAP1Q4V328 841 aa15.58■□□□□ 0.08
TRAPPC4-209ENST00000528230 CC2D2BQ6DHV5 1058 aa15.58■□□□□ 0.08
TRAPPC4-209ENST00000528230 RTKN2Q8IZC4 609 aa15.58■□□□□ 0.08
TRAPPC4-209ENST00000528230 MYH16Q9H6N6 1097 aa15.58■□□□□ 0.08
TRAPPC4-209ENST00000528230 ATP5J2-PTCD1G3V325 749 aa15.57■□□□□ 0.08
TRAPPC4-209ENST00000528230 VAMP4O75379 141 aa15.57■□□□□ 0.08
TRAPPC4-209ENST00000528230 KDM2BQ8NHM5 1336 aa15.57■□□□□ 0.08
TRAPPC4-209ENST00000528230 EXOSC9Q06265 439 aaKnown RBP15.56■□□□□ 0.08
TRAPPC4-209ENST00000528230 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC4-209ENST00000528230 KSR2Q6VAB6 950 aa15.56■□□□□ 0.08
TRAPPC4-209ENST00000528230 C3orf67Q6ZVT6 689 aa15.56■□□□□ 0.08
TRAPPC4-209ENST00000528230 METTL22Q9BUU2 404 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC4-209ENST00000528230 ZNF521Q96K83 1311 aa15.56■□□□□ 0.08
TRAPPC4-209ENST00000528230 TIAM2Q8IVF5 1701 aa15.55■□□□□ 0.08
TRAPPC4-209ENST00000528230 KIF3CO14782 793 aa15.55■□□□□ 0.08
TRAPPC4-209ENST00000528230 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
TRAPPC4-209ENST00000528230 HCLS1P14317 486 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC4-209ENST00000528230 FKBP4Q02790 459 aaKnown RBP eCLIP15.55■□□□□ 0.08
TRAPPC4-209ENST00000528230 SYNE4Q8N205 404 aa15.55■□□□□ 0.08
TRAPPC4-209ENST00000528230 CCDC191Q8NCU4 936 aa15.55■□□□□ 0.08
TRAPPC4-209ENST00000528230 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC4-209ENST00000528230 DDX60Q8IY21 1712 aaKnown RBP15.54■□□□□ 0.08
TRAPPC4-209ENST00000528230 GLTPD2A6NH11 291 aa15.54■□□□□ 0.08
TRAPPC4-209ENST00000528230 BBOX1O75936 387 aa15.54■□□□□ 0.08
TRAPPC4-209ENST00000528230 HSP90B1P14625 803 aaKnown RBP15.54■□□□□ 0.08
TRAPPC4-209ENST00000528230 FAM89AQ96GI7 184 aa15.54■□□□□ 0.08
TRAPPC4-209ENST00000528230 MYD88Q99836 296 aa15.54■□□□□ 0.08
TRAPPC4-209ENST00000528230 PI4KAP2A4QPH2 592 aa15.53■□□□□ 0.08
TRAPPC4-209ENST00000528230 SF3B3Q15393 1217 aaKnown RBP15.53■□□□□ 0.08
TRAPPC4-209ENST00000528230 DPY19L2Q6NUT2 758 aa15.53■□□□□ 0.08
TRAPPC4-209ENST00000528230 PI4KAP1Q8N8J0 262 aa15.53■□□□□ 0.08
TRAPPC4-209ENST00000528230 ZBTB38Q8NAP3 1195 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC4-209ENST00000528230 PSMD1Q99460 953 aa15.53■□□□□ 0.08
TRAPPC4-209ENST00000528230 MAP3K2Q9Y2U5 619 aa15.53■□□□□ 0.08
TRAPPC4-209ENST00000528230 SNED1Q8TER0 1413 aa15.52■□□□□ 0.08
TRAPPC4-209ENST00000528230 TCERG1O14776 1098 aaKnown RBP15.52■□□□□ 0.08
TRAPPC4-209ENST00000528230 PPEF1O14829 653 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC4-209ENST00000528230 PCCAP05165 728 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC4-209ENST00000528230 OLFM4Q6UX06 510 aa15.52■□□□□ 0.08
TRAPPC4-209ENST00000528230 DDX46Q7L014 1031 aaKnown RBP15.52■□□□□ 0.08
TRAPPC4-209ENST00000528230 TMX4Q9H1E5 349 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC4-209ENST00000528230 NMRK2Q9NPI5 230 aa15.52■□□□□ 0.08
TRAPPC4-209ENST00000528230 CWC25Q9NXE8 425 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC4-209ENST00000528230 ATP6V0A2Q9Y487 856 aa15.52■□□□□ 0.08
TRAPPC4-209ENST00000528230 ABCC4O15439 1325 aa15.51■□□□□ 0.07
TRAPPC4-209ENST00000528230 IRS4O14654 1257 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC4-209ENST00000528230 TOMM70O94826 608 aa15.51■□□□□ 0.07
TRAPPC4-209ENST00000528230 NEXNQ0ZGT2 675 aa15.51■□□□□ 0.07
TRAPPC4-209ENST00000528230 FLIIQ13045 1269 aa15.51■□□□□ 0.07
TRAPPC4-209ENST00000528230 G2E3Q7L622 706 aa15.51■□□□□ 0.07
TRAPPC4-209ENST00000528230 TMC4Q7Z404 712 aa15.51■□□□□ 0.07
TRAPPC4-209ENST00000528230 SP8Q8IXZ3 490 aa15.51■□□□□ 0.07
TRAPPC4-209ENST00000528230 GRAPQ13588 217 aa15.5■□□□□ 0.07
TRAPPC4-209ENST00000528230 GRAPLQ8TC17 118 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC4-209ENST00000528230 VPS33BQ9H267 617 aa15.5■□□□□ 0.07
TRAPPC4-209ENST00000528230 RRAGCQ9HB90 399 aa15.5■□□□□ 0.07
TRAPPC4-209ENST00000528230 TAF1P21675 1872 aa15.5■□□□□ 0.07
TRAPPC4-209ENST00000528230 E9PSI1 815 aa15.49■□□□□ 0.07
TRAPPC4-209ENST00000528230 IGKV5-2P06315 115 aa15.49■□□□□ 0.07
TRAPPC4-209ENST00000528230 IARSP41252 1262 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms