RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 NLRP3Q96P20 1036 aa30.04■■■□□ 2.4
PKP3-206ENST00000528036 HYPKQ9NX55 129 aa30.04■■■□□ 2.4
PKP3-206ENST00000528036 ARFGEF2Q9Y6D5 1785 aa30.03■■■□□ 2.4
PKP3-206ENST00000528036 ANP32CO43423 234 aa30.03■■■□□ 2.4
PKP3-206ENST00000528036 APLP1P51693 650 aa30.03■■■□□ 2.4
PKP3-206ENST00000528036 FKBP4Q02790 459 aaKnown RBP eCLIP30.03■■■□□ 2.4
PKP3-206ENST00000528036 SLC10A5Q5PT55 438 aa30.03■■■□□ 2.4
PKP3-206ENST00000528036 NECTIN2Q92692 538 aa30.03■■■□□ 2.4
PKP3-206ENST00000528036 MBIPQ9NS73 344 aa30.03■■■□□ 2.4
PKP3-206ENST00000528036 SLX4Q8IY92 1834 aa30.02■■■□□ 2.4
PKP3-206ENST00000528036 ANXA1P04083 346 aa30.02■■■□□ 2.4
PKP3-206ENST00000528036 AIMP1Q12904 312 aaKnown RBP30.02■■■□□ 2.4
PKP3-206ENST00000528036 TCIRG1Q13488 830 aa30.02■■■□□ 2.4
PKP3-206ENST00000528036 DUSP27Q5VZP5 1158 aa30.02■■■□□ 2.4
PKP3-206ENST00000528036 CRAMP1Q96RY5 1269 aa30.02■■■□□ 2.4
PKP3-206ENST00000528036 ABCC12Q96J65 1359 aa30.02■■■□□ 2.4
PKP3-206ENST00000528036 FER1L6Q2WGJ9 1857 aa30.02■■■□□ 2.4
PKP3-206ENST00000528036 NCBP3Q53F19 620 aaKnown RBP30.01■■■□□ 2.39
PKP3-206ENST00000528036 CHPF2Q9P2E5 772 aa30.01■■■□□ 2.39
PKP3-206ENST00000528036 TNRC6CQ9HCJ0 1690 aaKnown RBP30.01■■■□□ 2.39
PKP3-206ENST00000528036 KRT24Q2M2I5 525 aa30■■■□□ 2.39
PKP3-206ENST00000528036 PLBD2Q8NHP8 589 aa30■■■□□ 2.39
PKP3-206ENST00000528036 SMC1BQ8NDV3 1235 aa29.99■■■□□ 2.39
PKP3-206ENST00000528036 TMX4Q9H1E5 349 aaPredicted RBP29.99■■■□□ 2.39
PKP3-206ENST00000528036 CCDC27Q2M243 656 aa29.98■■■□□ 2.39
PKP3-206ENST00000528036 ANKRD13DQ6ZTN6 518 aa29.98■■■□□ 2.39
PKP3-206ENST00000528036 NLRP10Q86W26 655 aa29.97■■■□□ 2.39
PKP3-206ENST00000528036 PSMD1Q99460 953 aa29.97■■■□□ 2.39
PKP3-206ENST00000528036 TRMT112Q9UI30 125 aaKnown RBP29.94■■■□□ 2.38
PKP3-206ENST00000528036 SH3TC1Q8TE82 1336 aa29.94■■■□□ 2.38
PKP3-206ENST00000528036 SYNE4Q8N205 404 aa29.93■■■□□ 2.38
PKP3-206ENST00000528036 MRS2Q9HD23 443 aa29.93■■■□□ 2.38
PKP3-206ENST00000528036 TIAM2Q8IVF5 1701 aa29.92■■■□□ 2.38
PKP3-206ENST00000528036 DICER1Q9UPY3 1922 aaKnown RBP29.92■■■□□ 2.38
PKP3-206ENST00000528036 IQCA1LA6NCM1 817 aa29.91■■■□□ 2.38
PKP3-206ENST00000528036 IARSP41252 1262 aaKnown RBP29.91■■■□□ 2.38
PKP3-206ENST00000528036 TRIM28Q13263 835 aaKnown RBP29.91■■■□□ 2.38
PKP3-206ENST00000528036 ZNF277Q9NRM2 450 aaPredicted RBP29.91■■■□□ 2.38
PKP3-206ENST00000528036 CCDC88AQ3V6T2 1871 aa29.91■■■□□ 2.38
PKP3-206ENST00000528036 PPEF1O14829 653 aaPredicted RBP29.9■■■□□ 2.38
PKP3-206ENST00000528036 BBOX1O75936 387 aa29.9■■■□□ 2.38
PKP3-206ENST00000528036 HSP90B1P14625 803 aaKnown RBP29.9■■■□□ 2.38
PKP3-206ENST00000528036 GOLGA2Q08379 1002 aa29.9■■■□□ 2.38
PKP3-206ENST00000528036 CCDC30Q5VVM6 783 aa29.9■■■□□ 2.38
PKP3-206ENST00000528036 JDP2Q8WYK2 163 aa29.9■■■□□ 2.38
PKP3-206ENST00000528036 ISCA1Q9BUE6 129 aa29.89■■■□□ 2.38
PKP3-206ENST00000528036 VPS33BQ9H267 617 aa29.89■■■□□ 2.38
PKP3-206ENST00000528036 WDR90Q96KV7 1748 aa29.88■■■□□ 2.37
PKP3-206ENST00000528036 CCDC184Q52MB2 194 aa29.88■■■□□ 2.37
PKP3-206ENST00000528036 L3MBTL3Q96JM7 780 aaPredicted RBP29.88■■■□□ 2.37
PKP3-206ENST00000528036 IL16Q14005 1332 aa29.88■■■□□ 2.37
PKP3-206ENST00000528036 CACNA1SQ13698 1873 aa29.87■■■□□ 2.37
PKP3-206ENST00000528036 DDX46Q7L014 1031 aaKnown RBP29.87■■■□□ 2.37
PKP3-206ENST00000528036 TMC4Q7Z404 712 aa29.87■■■□□ 2.37
PKP3-206ENST00000528036 ATP6V0A2Q9Y487 856 aa29.87■■■□□ 2.37
PKP3-206ENST00000528036 POTECB2RU33 542 aa29.86■■■□□ 2.37
PKP3-206ENST00000528036 DDNO94850 711 aaPredicted RBP29.86■■■□□ 2.37
PKP3-206ENST00000528036 DDX58O95786 925 aaKnown RBP29.86■■■□□ 2.37
PKP3-206ENST00000528036 OLFM4Q6UX06 510 aa29.86■■■□□ 2.37
PKP3-206ENST00000528036 RIC3Q7Z5B4 369 aa29.86■■■□□ 2.37
PKP3-206ENST00000528036 WWC1Q8IX03 1113 aa29.86■■■□□ 2.37
PKP3-206ENST00000528036 FZD9O00144 591 aa29.85■■■□□ 2.37
PKP3-206ENST00000528036 SUPT20HQ8NEM7 779 aa29.85■■■□□ 2.37
PKP3-206ENST00000528036 SNED1Q8TER0 1413 aa29.85■■■□□ 2.37
PKP3-206ENST00000528036 ELL2O00472 640 aaPredicted RBP29.84■■■□□ 2.37
PKP3-206ENST00000528036 HCLS1P14317 486 aaPredicted RBP29.84■■■□□ 2.37
PKP3-206ENST00000528036 C3orf67Q6ZVT6 689 aa29.84■■■□□ 2.37
PKP3-206ENST00000528036 ANKRD36CQ5JPF3 1778 aa29.83■■■□□ 2.37
PKP3-206ENST00000528036 SP8Q8IXZ3 490 aa29.83■■■□□ 2.37
PKP3-206ENST00000528036 C8orf58Q8NAV2 365 aa29.83■■■□□ 2.37
PKP3-206ENST00000528036 ABCC4O15439 1325 aa29.82■■■□□ 2.36
PKP3-206ENST00000528036 EIF6P56537 245 aaKnown RBP29.82■■■□□ 2.36
PKP3-206ENST00000528036 GRAPQ13588 217 aa29.81■■■□□ 2.36
PKP3-206ENST00000528036 GRAPLQ8TC17 118 aaPredicted RBP29.81■■■□□ 2.36
PKP3-206ENST00000528036 STK31Q9BXU1 1019 aa29.81■■■□□ 2.36
PKP3-206ENST00000528036 GPC2Q8N158 579 aa29.8■■■□□ 2.36
PKP3-206ENST00000528036 LARGE2Q8N3Y3 721 aa29.8■■■□□ 2.36
PKP3-206ENST00000528036 ATP5J2-PTCD1G3V325 749 aa29.79■■■□□ 2.36
PKP3-206ENST00000528036 SF3B3Q15393 1217 aaKnown RBP29.79■■■□□ 2.36
PKP3-206ENST00000528036 WDR63Q8IWG1 891 aa29.79■■■□□ 2.36
PKP3-206ENST00000528036 CCDC191Q8NCU4 936 aa29.79■■■□□ 2.36
PKP3-206ENST00000528036 CEP350Q5VT06 3117 aa29.79■■■□□ 2.36
PKP3-206ENST00000528036 ZBTB38Q8NAP3 1195 aaPredicted RBP29.78■■■□□ 2.36
PKP3-206ENST00000528036 RTFDC1Q9BY42 306 aaPredicted RBP29.78■■■□□ 2.36
PKP3-206ENST00000528036 PHAXQ9H814 394 aaKnown RBP29.78■■■□□ 2.36
PKP3-206ENST00000528036 CHADLQ6NUI6 762 aa29.77■■■□□ 2.36
PKP3-206ENST00000528036 DNAJC5GQ8N7S2 189 aa29.77■■■□□ 2.36
PKP3-206ENST00000528036 FAM89AQ96GI7 184 aa29.77■■■□□ 2.36
PKP3-206ENST00000528036 HACL1Q9UJ83 578 aa29.77■■■□□ 2.36
PKP3-206ENST00000528036 TCERG1O14776 1098 aaKnown RBP29.76■■■□□ 2.35
PKP3-206ENST00000528036 DPP8Q6V1X1 898 aaPredicted RBP29.76■■■□□ 2.35
PKP3-206ENST00000528036 PNMA8AQ86V59 439 aaPredicted RBP29.76■■■□□ 2.35
PKP3-206ENST00000528036 LDHDQ86WU2 507 aa29.76■■■□□ 2.35
PKP3-206ENST00000528036 NIM1KQ8IY84 436 aa29.76■■■□□ 2.35
PKP3-206ENST00000528036 MPNDQ8N594 471 aa29.76■■■□□ 2.35
PKP3-206ENST00000528036 TAF1DQ9H5J8 278 aaPredicted RBP29.76■■■□□ 2.35
PKP3-206ENST00000528036 ZNF541Q9H0D2 1346 aa29.75■■■□□ 2.35
PKP3-206ENST00000528036 IRS4O14654 1257 aaPredicted RBP29.74■■■□□ 2.35
PKP3-206ENST00000528036 TWISTNBQ3B726 338 aaPredicted RBP29.74■■■□□ 2.35
PKP3-206ENST00000528036 TSR2Q969E8 191 aaKnown RBP29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms