RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 NLRP10Q86W26 655 aa29.02■■■□□ 2.24
LMNB2-204ENST00000527409 GPBP1L1Q9HC44 474 aaPredicted RBP29.02■■■□□ 2.24
LMNB2-204ENST00000527409 RNF181Q9P0P0 153 aa29.02■■■□□ 2.24
LMNB2-204ENST00000527409 CCDC88AQ3V6T2 1871 aa29.02■■■□□ 2.24
LMNB2-204ENST00000527409 FANCIQ9NVI1 1328 aa29.01■■■□□ 2.23
LMNB2-204ENST00000527409 RASSF7Q02833 373 aa29.01■■■□□ 2.23
LMNB2-204ENST00000527409 GOLGA2Q08379 1002 aa29.01■■■□□ 2.23
LMNB2-204ENST00000527409 TWISTNBQ3B726 338 aaPredicted RBP29.01■■■□□ 2.23
LMNB2-204ENST00000527409 ALDH1B1P30837 517 aa29■■■□□ 2.23
LMNB2-204ENST00000527409 ZNF219Q9P2Y4 722 aaPredicted RBP29■■■□□ 2.23
LMNB2-204ENST00000527409 NFKBIEO00221 500 aa28.99■■■□□ 2.23
LMNB2-204ENST00000527409 LMNB1P20700 586 aa28.99■■■□□ 2.23
LMNB2-204ENST00000527409 PHAXQ9H814 394 aaKnown RBP28.99■■■□□ 2.23
LMNB2-204ENST00000527409 CCER2I3L3R5 266 aa28.98■■■□□ 2.23
LMNB2-204ENST00000527409 SLC10A5Q5PT55 438 aa28.98■■■□□ 2.23
LMNB2-204ENST00000527409 ZNF526Q8TF50 670 aaPredicted RBP28.98■■■□□ 2.23
LMNB2-204ENST00000527409 STK31Q9BXU1 1019 aa28.98■■■□□ 2.23
LMNB2-204ENST00000527409 CACNA1FO60840 1977 aa28.97■■■□□ 2.23
LMNB2-204ENST00000527409 RIC3Q7Z5B4 369 aa28.97■■■□□ 2.23
LMNB2-204ENST00000527409 RPGRQ92834 1020 aaKnown RBP28.97■■■□□ 2.23
LMNB2-204ENST00000527409 ISCA1Q9BUE6 129 aa28.97■■■□□ 2.23
LMNB2-204ENST00000527409 TRMT112Q9UI30 125 aaKnown RBP28.97■■■□□ 2.23
LMNB2-204ENST00000527409 LTBP3Q9NS15 1303 aa28.96■■■□□ 2.23
LMNB2-204ENST00000527409 ZC3H4Q9UPT8 1303 aaKnown RBP28.96■■■□□ 2.23
LMNB2-204ENST00000527409 C7orf43Q8WVR3 580 aa28.96■■■□□ 2.23
LMNB2-204ENST00000527409 NLRP3Q96P20 1036 aa28.96■■■□□ 2.23
LMNB2-204ENST00000527409 TIAM2Q8IVF5 1701 aa28.96■■■□□ 2.23
LMNB2-204ENST00000527409 DICER1Q9UPY3 1922 aaKnown RBP28.96■■■□□ 2.23
LMNB2-204ENST00000527409 LAMB2P55268 1798 aa28.96■■■□□ 2.23
LMNB2-204ENST00000527409 SH3TC1Q8TE82 1336 aa28.95■■■□□ 2.23
LMNB2-204ENST00000527409 DDX58O95786 925 aaKnown RBP28.95■■■□□ 2.22
LMNB2-204ENST00000527409 HOXA10P31260 410 aaPredicted RBP28.95■■■□□ 2.22
LMNB2-204ENST00000527409 MYH16Q9H6N6 1097 aa28.95■■■□□ 2.22
LMNB2-204ENST00000527409 CCDC93Q567U6 631 aa28.94■■■□□ 2.22
LMNB2-204ENST00000527409 TAOK3Q9H2K8 898 aa28.94■■■□□ 2.22
LMNB2-204ENST00000527409 TRIM28Q13263 835 aaKnown RBP28.93■■■□□ 2.22
LMNB2-204ENST00000527409 RBM17Q96I25 401 aaKnown RBP28.93■■■□□ 2.22
LMNB2-204ENST00000527409 ATP5J2-PTCD1G3V325 749 aa28.92■■■□□ 2.22
LMNB2-204ENST00000527409 PRELPP51888 382 aa28.92■■■□□ 2.22
LMNB2-204ENST00000527409 CRAMP1Q96RY5 1269 aa28.92■■■□□ 2.22
LMNB2-204ENST00000527409 DDX60Q8IY21 1712 aaKnown RBP28.91■■■□□ 2.22
LMNB2-204ENST00000527409 SPINK5Q9NQ38 1064 aaPredicted RBP28.91■■■□□ 2.22
LMNB2-204ENST00000527409 ZNF521Q96K83 1311 aa28.91■■■□□ 2.22
LMNB2-204ENST00000527409 EXOSC9Q06265 439 aaKnown RBP28.9■■■□□ 2.22
LMNB2-204ENST00000527409 C3orf67Q6ZVT6 689 aa28.9■■■□□ 2.22
LMNB2-204ENST00000527409 RTKN2Q8IZC4 609 aa28.89■■■□□ 2.22
LMNB2-204ENST00000527409 KDM2BQ8NHM5 1336 aa28.89■■■□□ 2.21
LMNB2-204ENST00000527409 HCLS1P14317 486 aaPredicted RBP28.88■■■□□ 2.21
LMNB2-204ENST00000527409 CC2D2BQ6DHV5 1058 aa28.88■■■□□ 2.21
LMNB2-204ENST00000527409 SYNE4Q8N205 404 aa28.88■■■□□ 2.21
LMNB2-204ENST00000527409 TCERG1O14776 1098 aaKnown RBP28.87■■■□□ 2.21
LMNB2-204ENST00000527409 VAMP4O75379 141 aa28.87■■■□□ 2.21
LMNB2-204ENST00000527409 SLC4A2P04920 1241 aa28.87■■■□□ 2.21
LMNB2-204ENST00000527409 C1QTNF8P60827 252 aa28.87■■■□□ 2.21
LMNB2-204ENST00000527409 MYD88Q99836 296 aa28.87■■■□□ 2.21
LMNB2-204ENST00000527409 METTL22Q9BUU2 404 aaPredicted RBP28.87■■■□□ 2.21
LMNB2-204ENST00000527409 FKBP4Q02790 459 aaKnown RBP eCLIP28.86■■■□□ 2.21
LMNB2-204ENST00000527409 KSR2Q6VAB6 950 aa28.86■■■□□ 2.21
LMNB2-204ENST00000527409 CCDC191Q8NCU4 936 aa28.86■■■□□ 2.21
LMNB2-204ENST00000527409 GRIPAP1Q4V328 841 aa28.85■■■□□ 2.21
LMNB2-204ENST00000527409 FAM89AQ96GI7 184 aa28.85■■■□□ 2.21
LMNB2-204ENST00000527409 MAP3K2Q9Y2U5 619 aa28.85■■■□□ 2.21
LMNB2-204ENST00000527409 SNED1Q8TER0 1413 aa28.85■■■□□ 2.21
LMNB2-204ENST00000527409 PI4KAP2A4QPH2 592 aa28.84■■■□□ 2.21
LMNB2-204ENST00000527409 PPEF1O14829 653 aaPredicted RBP28.84■■■□□ 2.21
LMNB2-204ENST00000527409 OLFM4Q6UX06 510 aa28.84■■■□□ 2.21
LMNB2-204ENST00000527409 PI4KAP1Q8N8J0 262 aa28.84■■■□□ 2.21
LMNB2-204ENST00000527409 ZNF428Q96B54 188 aa28.84■■■□□ 2.21
LMNB2-204ENST00000527409 ZBTB38Q8NAP3 1195 aaPredicted RBP28.83■■■□□ 2.21
LMNB2-204ENST00000527409 ABCC4O15439 1325 aa28.83■■■□□ 2.21
LMNB2-204ENST00000527409 KIF3CO14782 793 aa28.82■■■□□ 2.2
LMNB2-204ENST00000527409 HSP90B1P14625 803 aaKnown RBP28.82■■■□□ 2.2
LMNB2-204ENST00000527409 G2E3Q7L622 706 aa28.82■■■□□ 2.2
LMNB2-204ENST00000527409 CWC25Q9NXE8 425 aaPredicted RBP28.82■■■□□ 2.2
LMNB2-204ENST00000527409 NEXNQ0ZGT2 675 aa28.81■■■□□ 2.2
LMNB2-204ENST00000527409 FLIIQ13045 1269 aa28.81■■■□□ 2.2
LMNB2-204ENST00000527409 DDX46Q7L014 1031 aaKnown RBP28.81■■■□□ 2.2
LMNB2-204ENST00000527409 PSMD1Q99460 953 aa28.81■■■□□ 2.2
LMNB2-204ENST00000527409 TMX4Q9H1E5 349 aaPredicted RBP28.81■■■□□ 2.2
LMNB2-204ENST00000527409 NMRK2Q9NPI5 230 aa28.81■■■□□ 2.2
LMNB2-204ENST00000527409 GLTPD2A6NH11 291 aa28.8■■■□□ 2.2
LMNB2-204ENST00000527409 IRS4O14654 1257 aaPredicted RBP28.8■■■□□ 2.2
LMNB2-204ENST00000527409 DIEXFQ68CQ4 756 aaKnown RBP28.8■■■□□ 2.2
LMNB2-204ENST00000527409 E9PSI1 815 aa28.79■■■□□ 2.2
LMNB2-204ENST00000527409 BBOX1O75936 387 aa28.79■■■□□ 2.2
LMNB2-204ENST00000527409 PCCAP05165 728 aaPredicted RBP28.79■■■□□ 2.2
LMNB2-204ENST00000527409 SF3B3Q15393 1217 aaKnown RBP28.79■■■□□ 2.2
LMNB2-204ENST00000527409 RTL5Q5HYW3 569 aaPredicted RBP28.79■■■□□ 2.2
LMNB2-204ENST00000527409 FKBP5Q13451 457 aaPredicted RBP28.78■■■□□ 2.2
LMNB2-204ENST00000527409 ATP6V0A2Q9Y487 856 aa28.78■■■□□ 2.2
LMNB2-204ENST00000527409 TAF1P21675 1872 aa28.78■■■□□ 2.2
LMNB2-204ENST00000527409 GRAPQ13588 217 aa28.77■■■□□ 2.2
LMNB2-204ENST00000527409 DPY19L2Q6NUT2 758 aa28.77■■■□□ 2.2
LMNB2-204ENST00000527409 GRAPLQ8TC17 118 aaPredicted RBP28.77■■■□□ 2.2
LMNB2-204ENST00000527409 ZNF277Q9NRM2 450 aaPredicted RBP28.77■■■□□ 2.2
LMNB2-204ENST00000527409 IGKV5-2P06315 115 aa28.75■■■□□ 2.19
LMNB2-204ENST00000527409 IARSP41252 1262 aaKnown RBP28.75■■■□□ 2.19
LMNB2-204ENST00000527409 TMC4Q7Z404 712 aa28.75■■■□□ 2.19
LMNB2-204ENST00000527409 WDR90Q96KV7 1748 aa28.74■■■□□ 2.19
LMNB2-204ENST00000527409 SP8Q8IXZ3 490 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms