RNA–Protein interactions for RNA: ENST00000527018.5

CTSC-204, Transcript of cathepsin C, human

TSL 5

Gene CTSC, Length 733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-204	ENST00000527018	ADAMTSL1	Q8N6G6	1762 aa		13.93	□□□□□ -0.18
CTSC-204	ENST00000527018	UBN2	Q6ZU65	1347 aa		13.92	□□□□□ -0.18
CTSC-204	ENST00000527018	PASK	Q96RG2	1323 aa		13.92	□□□□□ -0.18
CTSC-204	ENST00000527018	CRY2	Q49AN0	593 aa		13.92	□□□□□ -0.18
CTSC-204	ENST00000527018	SUSD4	Q5VX71	490 aa		13.92	□□□□□ -0.18
CTSC-204	ENST00000527018	RBM17	Q96I25	401 aa	Known RBP	13.92	□□□□□ -0.18
CTSC-204	ENST00000527018	PSMD1	Q99460	953 aa		13.92	□□□□□ -0.18
CTSC-204	ENST00000527018	TSPYL4	Q9UJ04	414 aa		13.92	□□□□□ -0.18
CTSC-204	ENST00000527018	GJA3	Q9Y6H8	435 aa		13.92	□□□□□ -0.18
CTSC-204	ENST00000527018	TRPM7	Q96QT4	1865 aa		13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	TMEM88B	A6NKF7	163 aa		13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	FZD9	O00144	591 aa		13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	EIF2S2	P20042	333 aa	Known RBP	13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	EIF6	P56537	245 aa	Known RBP	13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	CC2D2B	Q6DHV5	1058 aa		13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	PPP1R42	Q7Z4L9	355 aa		13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	PNMA8A	Q86V59	439 aa	Predicted RBP	13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	GPC2	Q8N158	579 aa		13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	CNTNAP1	P78357	1384 aa		13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.91	□□□□□ -0.18
CTSC-204	ENST00000527018	RIC1	Q4ADV7	1423 aa		13.9	□□□□□ -0.18
CTSC-204	ENST00000527018	PPEF1	O14829	653 aa	Predicted RBP	13.9	□□□□□ -0.18
CTSC-204	ENST00000527018	LMOD1	P29536	600 aa	Predicted RBP	13.9	□□□□□ -0.18
CTSC-204	ENST00000527018	MAP1S	Q66K74	1059 aa	Predicted RBP	13.9	□□□□□ -0.18
CTSC-204	ENST00000527018	LARGE2	Q8N3Y3	721 aa		13.9	□□□□□ -0.18
CTSC-204	ENST00000527018	TMX4	Q9H1E5	349 aa	Predicted RBP	13.9	□□□□□ -0.18
CTSC-204	ENST00000527018	ERBB4	Q15303	1308 aa		13.9	□□□□□ -0.19
CTSC-204	ENST00000527018	TAF1	P21675	1872 aa		13.89	□□□□□ -0.19
CTSC-204	ENST00000527018	COL4A5	P29400	1685 aa		13.89	□□□□□ -0.19
CTSC-204	ENST00000527018	NTSR2	O95665	410 aa		13.89	□□□□□ -0.19
CTSC-204	ENST00000527018	ITGBL1	O95965	494 aa	Predicted RBP	13.89	□□□□□ -0.19
CTSC-204	ENST00000527018	RIPK4	P57078	832 aa		13.89	□□□□□ -0.19
CTSC-204	ENST00000527018	PARP10	Q53GL7	1025 aa		13.89	□□□□□ -0.19
CTSC-204	ENST00000527018	ZNF34	Q8IZ26	560 aa		13.89	□□□□□ -0.19
CTSC-204	ENST00000527018	AIDA	Q96BJ3	306 aa		13.89	□□□□□ -0.19
CTSC-204	ENST00000527018	CRAMP1	Q96RY5	1269 aa		13.89	□□□□□ -0.19
CTSC-204	ENST00000527018	LTBP1	Q14766	1721 aa		13.89	□□□□□ -0.19
CTSC-204	ENST00000527018	SNED1	Q8TER0	1413 aa		13.89	□□□□□ -0.19
CTSC-204	ENST00000527018	ANXA1	P04083	346 aa		13.88	□□□□□ -0.19
CTSC-204	ENST00000527018	HOXA10	P31260	410 aa	Predicted RBP	13.88	□□□□□ -0.19
CTSC-204	ENST00000527018	VEGFB	P49765	207 aa		13.88	□□□□□ -0.19
CTSC-204	ENST00000527018	SLC51A	Q86UW1	340 aa		13.88	□□□□□ -0.19
CTSC-204	ENST00000527018	CNTROB	Q8N137	903 aa		13.88	□□□□□ -0.19
CTSC-204	ENST00000527018	NECTIN2	Q92692	538 aa		13.88	□□□□□ -0.19
CTSC-204	ENST00000527018	NLRP3	Q96P20	1036 aa		13.88	□□□□□ -0.19
CTSC-204	ENST00000527018	FOXN1	O15353	648 aa		13.87	□□□□□ -0.19
CTSC-204	ENST00000527018	AIMP1	Q12904	312 aa	Known RBP	13.87	□□□□□ -0.19
CTSC-204	ENST00000527018	GRIPAP1	Q4V328	841 aa		13.87	□□□□□ -0.19
CTSC-204	ENST00000527018	C3orf67	Q6ZVT6	689 aa		13.87	□□□□□ -0.19
CTSC-204	ENST00000527018	NIM1K	Q8IY84	436 aa		13.87	□□□□□ -0.19
CTSC-204	ENST00000527018	UTP14A	Q9BVJ6	771 aa	Known RBP	13.87	□□□□□ -0.19
CTSC-204	ENST00000527018	ABT1	Q9ULW3	272 aa	Known RBP	13.87	□□□□□ -0.19
CTSC-204	ENST00000527018	PPIP5K2	O43314	1243 aa		13.86	□□□□□ -0.19
CTSC-204	ENST00000527018	LMOD3	Q0VAK6	560 aa		13.86	□□□□□ -0.19
CTSC-204	ENST00000527018	NEUROD2	Q15784	382 aa		13.86	□□□□□ -0.19
CTSC-204	ENST00000527018	PROSER3	Q2NL68	480 aa		13.86	□□□□□ -0.19
CTSC-204	ENST00000527018	EPS15	P42566	896 aa		13.85	□□□□□ -0.19
CTSC-204	ENST00000527018	PDIA6	Q15084	440 aa		13.85	□□□□□ -0.19
CTSC-204	ENST00000527018	AOC3	Q16853	763 aa		13.85	□□□□□ -0.19
CTSC-204	ENST00000527018	DEFB115	Q30KQ5	88 aa		13.85	□□□□□ -0.19
CTSC-204	ENST00000527018	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.85	□□□□□ -0.19
CTSC-204	ENST00000527018	LAS1L	Q9Y4W2	734 aa	Known RBP	13.85	□□□□□ -0.19
CTSC-204	ENST00000527018	TMPO	P42166	694 aa	Known RBP	13.84	□□□□□ -0.19
CTSC-204	ENST00000527018	CTCF	P49711	727 aa	Predicted RBP	13.84	□□□□□ -0.19
CTSC-204	ENST00000527018	COPS6	Q7L5N1	327 aa		13.84	□□□□□ -0.19
CTSC-204	ENST00000527018	XAGE3	Q8WTP9	111 aa		13.84	□□□□□ -0.19
CTSC-204	ENST00000527018	ABCC4	O15439	1325 aa		13.84	□□□□□ -0.19
CTSC-204	ENST00000527018	HCLS1	P14317	486 aa	Predicted RBP	13.83	□□□□□ -0.2
CTSC-204	ENST00000527018	SCNN1D	P51172	638 aa		13.83	□□□□□ -0.2
CTSC-204	ENST00000527018	GRM1	Q13255	1194 aa		13.83	□□□□□ -0.2
CTSC-204	ENST00000527018	RALBP1	Q15311	655 aa		13.83	□□□□□ -0.2
CTSC-204	ENST00000527018	HSP90AB3P	Q58FF7	597 aa		13.83	□□□□□ -0.2
CTSC-204	ENST00000527018	LRP10	Q7Z4F1	713 aa		13.83	□□□□□ -0.2
CTSC-204	ENST00000527018	CCDC146	Q8IYE0	955 aa		13.83	□□□□□ -0.2
CTSC-204	ENST00000527018	SUPT20H	Q8NEM7	779 aa		13.83	□□□□□ -0.2
CTSC-204	ENST00000527018	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
CTSC-204	ENST00000527018	BABAM1	Q9NWV8	329 aa		13.83	□□□□□ -0.2
CTSC-204	ENST00000527018	ATP6V0A2	Q9Y487	856 aa		13.83	□□□□□ -0.2
CTSC-204	ENST00000527018	DDX60	Q8IY21	1712 aa	Known RBP	13.82	□□□□□ -0.2
CTSC-204	ENST00000527018	RASSF10	A6NK89	507 aa		13.82	□□□□□ -0.2
CTSC-204	ENST00000527018	FMR1	Q06787	632 aa	Known RBP eCLIP	13.82	□□□□□ -0.2	4e-6	■■■■□ 23.7
CTSC-204	ENST00000527018	SLC10A5	Q5PT55	438 aa		13.82	□□□□□ -0.2
CTSC-204	ENST00000527018	DPP8	Q6V1X1	898 aa	Predicted RBP	13.82	□□□□□ -0.2
CTSC-204	ENST00000527018	DDX46	Q7L014	1031 aa	Known RBP	13.82	□□□□□ -0.2
CTSC-204	ENST00000527018	ZNF428	Q96B54	188 aa		13.82	□□□□□ -0.2
CTSC-204	ENST00000527018	TRMT112	Q9UI30	125 aa	Known RBP	13.82	□□□□□ -0.2
CTSC-204	ENST00000527018	WDR33	Q9C0J8	1336 aa	Known RBP	13.82	□□□□□ -0.2
CTSC-204	ENST00000527018	LBX1	P52954	281 aa		13.81	□□□□□ -0.2
CTSC-204	ENST00000527018	KRT24	Q2M2I5	525 aa		13.81	□□□□□ -0.2
CTSC-204	ENST00000527018	USP50	Q70EL3	339 aa	Predicted RBP	13.81	□□□□□ -0.2
CTSC-204	ENST00000527018	NLRP10	Q86W26	655 aa		13.81	□□□□□ -0.2
CTSC-204	ENST00000527018	MPND	Q8N594	471 aa		13.81	□□□□□ -0.2
CTSC-204	ENST00000527018	PRDM10	Q9NQV6	1147 aa		13.81	□□□□□ -0.2
CTSC-204	ENST00000527018	WBP1L	Q9NX94	342 aa		13.81	□□□□□ -0.2
CTSC-204	ENST00000527018	POLR2A	P24928	1970 aa	Known RBP	13.8	□□□□□ -0.2
CTSC-204	ENST00000527018	BBOX1	O75936	387 aa		13.8	□□□□□ -0.2
CTSC-204	ENST00000527018	TCIRG1	Q13488	830 aa		13.8	□□□□□ -0.2
CTSC-204	ENST00000527018	WDR43	Q15061	677 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
CTSC-204	ENST00000527018	VPS33B	Q9H267	617 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms